Search Results - "Strömvik, Martina V."

Structural genome analysis in cultivated potato taxa by Kyriakidou, Maria, Achakkagari, Sai Reddy, Gálvez López, José Héctor, Zhu, Xinyi, Tang, Chen Yu, Tai, Helen H., Anglin, Noelle L., Ellis, David, Strömvik, Martina V.

“…Key message Twelve potato accessions were selected to represent two principal views on potato taxonomy. The genomes were sequenced and analyzed for structural…”
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Genome sequencing of adapted diploid potato clones by Achakkagari, Sai Reddy, Kyriakidou, Maria, Gardner, Kyle M., De Koeyer, David, De Jong, Hielke, Strömvik, Martina V., Tai, Helen H.

“…Cultivated potato is a vegetatively propagated crop, and most varieties are autotetraploid with high levels of heterozygosity. Reducing the ploidy and breeding…”
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Current Strategies of Polyploid Plant Genome Sequence Assembly by Kyriakidou, Maria, Tai, Helen H, Anglin, Noelle L, Ellis, David, Strömvik, Martina V

“…Polyploidy or duplication of an entire genome occurs in the majority of angiosperms. The understanding of polyploid genomes is important for the improvement of…”
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Pangenome analyses reveal impact of transposable elements and ploidy on the evolution of potato species by Bozan, Ilayda, Achakkagari, Sai Reddy, Anglin, Noelle L, Ellis, David, Tai, Helen H, Strömvik, Martina V

“…Potato ( ., family Solanaceae) is the most important noncereal food crop globally. It has over 100 wild relatives in the section , which features species with…”
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Promoters of the soybean seed lectin homologues Le2 and Le3 regulate gene expression in vegetative tissues in Arabidopsis by Saeed, Hanaa A., Vodkin, Lila O., Strömvik, Martina V.

“…Soybean seed lectin, Le1, is specifically expressed in seeds of soybean, Glycine max (L.) Merr., due to its promoter. Two genes, Le2 and Le3, homologues of…”
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Complete plastome assemblies from a panel of 13 diverse potato taxa by Achakkagari, Sai Reddy, Kyriakidou, Maria, Tai, Helen H, Anglin, Noelle L, Ellis, David, Strömvik, Martina V

“…The chloroplasts are a crucial part of photosynthesizing plant cells and are extensively utilized in phylogenetic studies mainly due to their maternal…”
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The complete mitogenome assemblies of 10 diploid potato clones reveal recombination and overlapping variants by Achakkagari, Sai Reddy, Tai, Helen H, Davidson, Charlotte, De Jong, Hielke, Strömvik, Martina V

“…Abstract The potato mitogenome is complex and to understand various biological functions and nuclear–cytoplasmic interactions, it is important to characterize…”
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Development of a Quick-Install Rapid Phenotyping System by Buelvas, Roberto M, Adamchuk, Viacheslav I, Lan, John, Hoyos-Villegas, Valerio, Whitmore, Arlene, Stromvik, Martina V

“…In recent years, there has been a growing need for accessible High-Throughput Plant Phenotyping (HTPP) platforms that can take measurements of plant traits in…”
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Genome assembly of six polyploid potato genomes by Kyriakidou, Maria, Anglin, Noelle L., Ellis, David, Tai, Helen H., Strömvik, Martina V.

“…Genome assembly of polyploid plant genomes is a laborious task as they contain more than two copies of the genome, are often highly heterozygous with a high…”
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Comparative transcriptional analysis provides new insights into the molecular basis of adventitious rooting recalcitrance in Eucalyptus by de Almeida, Márcia Rodrigues, de Bastiani, Daniela, Gaeta, Marcos Letaif, de Araújo Mariath, Jorge Ernesto, de Costa, Fernanda, Retallick, Jeffrey, Nolan, Lana, Tai, Helen H., Strömvik, Martina V., Fett-Neto, Arthur Germano

“…•Auxin promotes different gene expression profiles in E. globulus and E. grandis.•Cambium zone undergoes early divisions during development of adventitious…”
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The plastome of Arctic Oxytropis arctobia (Fabaceae) is significantly different from that of O. splendens and other related species by Tavares, Juan C Camargo, Achakkagari, Sai Reddy, Archambault, Annie, Strömvik, Martina V

“…Anatomical and physiological specializations for plant adaptation to harsh climates result from molecular mechanisms that can be encoded in the nucleus or…”
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De novo computational identification of stress-related sequence motifs and microRNA target sites in untranslated regions of a plant translatome by Munusamy, Prabhakaran, Zolotarov, Yevgen, Meteignier, Louis-Valentin, Moffett, Peter, Strömvik, Martina V.

“…Gene regulation at the transcriptional and translational level leads to diversity in phenotypes and function in organisms. Regulatory DNA or RNA sequence…”
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The nitrogen responsive transcriptome in potato (Solanum tuberosum L.) reveals significant gene regulatory motifs by Gálvez, José Héctor, Tai, Helen H., Lagüe, Martin, Zebarth, Bernie J., Strömvik, Martina V.

“…Nitrogen (N) is the most important nutrient for the growth of potato ( Solanum tuberosum L.). Foliar gene expression in potato plants with and without N…”
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Seed storage protein gene promoters contain conserved DNA motifs in Brassicaceae, Fabaceae and Poaceae by Fauteux, François, Strömvik, Martina V

“…Accurate computational identification of cis-regulatory motifs is difficult, particularly in eukaryotic promoters, which typically contain multiple short and…”
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The complete plastome sequences of nine diploid potato clones by Achakkagari, Sai Reddy, Tai, Helen H., Davidson, Charlotte, Jong, Hielke De, Strömvik, Martina V.

“…Potato (Solanum tuberosum L.) is the world's fourth most important food crop and essential for global food security. The potato chloroplast genomes, the…”
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PR-10, defensin and cold dehydrin genes are among those over expressed in Oxytropis (Fabaceae) species adapted to the arctic by Archambault, Annie, Strömvik, Martina V

“…In many studied plants, typical responses to cold treatment include up-regulating the hydrophilic COR/LEA genes and down-regulating photosynthesis-related…”
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Laser Capture Microdissection: Avoiding Bias in Analysis by Selecting Just What Matters by de Almeida, Márcia R, Strömvik, Martina V

“…Laser capture microdissection (LCM) is a powerful technique for harvesting specific cells from a heterogeneous population. As each cell and tissue has its…”
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Complete mitogenome assemblies from a panel of 13 diverse potato taxa by Achakkagari, Sai Reddy, Bozan, Ilayda, Anglin, Noelle L., Ellis, David, Tai, Helen H., Strömvik, Martina V.

“…Mitochondrial DNA is maternally inherited and is shown to affect nuclear-cytoplasmic interactions in potato. Analyzing the mitogenome helps understand the…”
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Data Mining Nitrogen-Responsive Gene Expression for Source–Sink Relations and Indicators of N Status in Potato by Parenteau, Mia T., Gu, Hong, Zebarth, Bernie J., Cambouris, Athyna N., Lafond, Jean, Nelson, Alison, Nyiraneza, Judith, Davidson, Charlotte, Lagüe, Martin, Galvez, José Héctor, Strömvik, Martina V., Tai, Helen H.

“…Potato tuber yields depend on nitrogen (N) supply, which affects source–sink relations. Transcriptome sequencing of the foliar source using a single field…”
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Seeder: discriminative seeding DNA motif discovery by Fauteux, François, Blanchette, Mathieu, Strömvik, Martina V.

“…Motivation: The computational identification of transcription factor binding sites is a major challenge in bioinformatics and an important complement to…”
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