Search Results - "Stein, LD"

Human genome End of the beginning by Stein, Lincoln D

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The International HapMap Project Web site by Thorisson, Gudmundur A, Smith, Albert V, Krishnan, Lalitha, Stein, Lincoln D

“…The HapMap Web site at http://www.hapmap.org is the primary portal to genotype data produced as part of the International Haplotype Map Project. In phase I of…”
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Integrating biological databases by Stein, Lincoln D

“…Recent years have seen an explosion in the amount of available biological data. More and more genomes are being sequenced and annotated, and protein and gene…”
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The generic genome browser: a building block for a model organism system database by Stein, Lincoln D, Mungall, Christopher, Shu, ShengQiang, Caudy, Michael, Mangone, Marco, Day, Allen, Nickerson, Elizabeth, Stajich, Jason E, Harris, Todd W, Arva, Adrian, Lewis, Suzanna

“…The Generic Model Organism System Database Project (GMOD) seeks to develop reusable software components for model organism system databases. In this paper we…”
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The Bioperl toolkit: Perl modules for the life sciences by Stajich, Jason E, Block, David, Boulez, Kris, Brenner, Steven E, Chervitz, Stephen A, Dagdigian, Chris, Fuellen, Georg, Gilbert, James G R, Korf, Ian, Lapp, Hilmar, Lehväslaiho, Heikki, Matsalla, Chad, Mungall, Chris J, Osborne, Brian I, Pocock, Matthew R, Schattner, Peter, Senger, Martin, Stein, Lincoln D, Stupka, Elia, Wilkinson, Mark D, Birney, Ewan

“…The Bioperl project is an international open-source collaboration of biologists, bioinformaticians, and computer scientists that has evolved over the past 7 yr…”
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Abstract P2-10-04: Targeted sequencing in early breast cancer: Identification of novel candidate mutations predictive of anthracycline benefit by Spears, M, Kalatskaya, I, Trinh, QM, Liao, L, Chong, TM, Crozier, C, Dion, D, Heisler, L, Timms, L, Stein, LD, Pritchard, KI, Levine, MN, Shepherd, L, Twelves, CJ, Bartlett, JMS

“…Background The use of chemotherapies such as anthracyclines and taxanes have improved overall and disease free survival in breast cancer. For all patients,…”
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Abstract PD4-11: Copy-number and targeted sequencing analyses to identify distinct prognostic groups: Implications for patient selection to targeted therapies amongst anti-endocrine therapy resistant early breast cancers by Bayani, J, Kornaga, EN, Crozier, C, Jang, GH, Kalatskaya, I, Trinh, QM, Yao, CQ, Livingstone, J, Hasenburg, A, Kieback, DG, Markopoulos, C, Dirix, L, Boutros, PC, Spears, M, Stein, LD, Rea, D, Bartlett, JMS

“…Hormone receptor positive breast cancer remains an ongoing therapeutic challenge. Despite optimal anti-endocrine therapies, most breast cancer deaths follow a…”
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Etanercept in Children with Polyarticular Juvenile Rheumatoid Arthritis by Lovell, Daniel J, Giannini, Edward H, Reiff, Andreas, Cawkwell, Gail D, Silverman, Earl D, Nocton, James J, Stein, Leonard D, Gedalia, Abraham, Ilowite, Norman T, Wallace, Carol A, Whitmore, James, Finck, Barbara K

“…Juvenile rheumatoid arthritis is the most common rheumatic condition in children. 1 , 2 In approximately one third of patients, the disease is controlled with…”
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The SNP Consortium website: past, present and future by Thorisson, Gudmundur A., Stein, Lincoln D.

“…The SNP Consortium website (http://snp.cshl.org) has undergone many changes since its initial conception three years ago. The database back end has been…”
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Conservation and functional significance of gene topology in the genome of Caenorhabditis elegans by Chen, Nansheng, Stein, Lincoln D

“…We have systematically examined the correlation between transcriptional expression pattern and the physical layout of gene pairs in the genome of…”
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The mutational landscape of cancer driver genes in matched primary ductal carcinoma in situ and recurrent ductal carcinoma in situ or recurrent invasive cancers by Bayani, J, Trinh, QM, Quintayo, MA, Crozier, C, Lungu, I, Dion, D, Felipe-Lima, J, Pruneri, G, Bergh, J, Warnberg, F, Viale, G, Stein, LD, Bartlett, JMS

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WormBase: a comprehensive data resource for Caenorhabditis biology and genomics by Chen, Nansheng, Harris, Todd W., Antoshechkin, Igor, Bastiani, Carol, Bieri, Tamberlyn, Blasiar, Darin, Bradnam, Keith, Canaran, Payan, Chan, Juancarlos, Chen, Chao-Kung, Chen, Wen J., Cunningham, Fiona, Davis, Paul, Kenny, Eimear, Kishore, Ranjana, Lawson, Daniel, Lee, Raymond, Muller, Hans-Michael, Nakamura, Cecilia, Pai, Shraddha, Ozersky, Philip, Petcherski, Andrei, Rogers, Anthony, Sabo, Aniko, Schwarz, Erich M., Van Auken, Kimberly, Wang, Qinghua, Durbin, Richard, Spieth, John, Sternberg, Paul W., Stein, Lincoln D.

“…WormBase (http://www.wormbase.org), the model organism database for information about Caenorhabditis elegans and related nematodes, continues to expand in…”
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WormBase: a multi‐species resource for nematode biology and genomics by Harris, Todd W., Chen, Nansheng, Cunningham, Fiona, Tello‐Ruiz, Marcela, Antoshechkin, Igor, Bastiani, Carol, Bieri, Tamberlyn, Blasiar, Darin, Bradnam, Keith, Chan, Juancarlos, Chen, Chao‐Kung, Chen, Wen J., Davis, Paul, Kenny, Eimear, Kishore, Ranjana, Lawson, Daniel, Lee, Raymond, Muller, Hans‐Michael, Nakamura, Cecilia, Ozersky, Philip, Petcherski, Andrei, Rogers, Anthony, Sabo, Aniko, Schwarz, Erich M., Van Auken, Kimberly, Wang, Qinghua, Durbin, Richard, Spieth, John, Sternberg, Paul W., Stein, Lincoln D.

“…WormBase (http://www.wormbase.org/) is the central data repository for information about Caenorhabditis elegans and related nematodes. As a model organism…”
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Cloning of a developmentally regulated tegument antigen of Schistosoma mansoni by Stein, L D, David, J R

“…We have cloned a gene encoding a 22.6 kDa antigen from a Schistosoma mansoni cDNA library. Northern blots indicate that transcription of this antigen occurs in…”
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Gramene, a Tool for Grass Genomics by Doreen H. Ware, Pankaj Jaiswal, Ni, Junjian, Immanuel V. Yap, Xioakang Pan, Ken Y. Clark, Teytelman, Leonid, Steven C. Schmidt, Zhao, Wei, Kuan Chang, Sam Cartinhour, Stein, Lincoln D., McCouch, Susan R.

“…Gramene (http://www.gramene.org) is a comparative genome mapping database for grasses and a community resource for rice (Oryza sativa). It combines a…”
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Identification of ciliary and ciliopathy genes in Caenorhabditis elegans through comparative genomics by Chen, Nansheng, Mah, Allan, Blacque, Oliver E, Chu, Jeffrey, Phgora, Kiran, Bakhoum, Mathieu W, Newbury, C Rebecca Hunt, Khattra, Jaswinder, Chan, Susanna, Go, Anne, Efimenko, Evgeni, Johnsen, Robert, Phirke, Prasad, Swoboda, Peter, Marra, Marco, Moerman, Donald G, Leroux, Michel R, Baillie, David L, Stein, Lincoln D

“…The recent availability of genome sequences of multiple related Caenorhabditis species has made it possible to identify, using comparative genomics, similarly…”
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Thymus transplantation in complete DiGeorge syndrome: immunologic and safety evaluations in 12 patients by Markert, M. Louise, Sarzotti, Marcella, Ozaki, Daniel A., Sempowski, Gregory D., Rhein, Maria E., Hale, Laura P., Le Deist, Francoise, Alexieff, Marilyn J., Li, Jie, Hauser, Elizabeth R., Haynes, Barton F., Rice, Henry E., Skinner, Michael A., Mahaffey, Samuel M., Jaggers, James, Stein, Leonard D., Mill, Michael R.

“…Complete DiGeorge syndrome is a fatal condition in which infants have no detectable thymus function. The optimal treatment for the immune deficiency of…”
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An STS-Based Map of the Human Genome by Hudson, Thomas J., Stein, Lincoln D., Gerety, Sebastian S., Ma, Junli, Castle, Andrew B., Silva, James, Slonim, Donna K., Baptista, Rafael, Kruglyak, Leonid, Xu, Shu-Hua, Hu, Xintong, Angela M. E. Colbert, Rosenberg, Carl, Reeve-Daly, Mary Pat, Rozen, Steve, Hui, Lester, Wu, Xiaoyun, Vestergaard, Christina, Wilson, Kimberly M., Bae, Jane S., Maitra, Shanak, Ganiatsas, Soula, Evans, Cheryl A., DeAngelis, Margaret M., Ingalls, Kimberly A., Nahf, Robert W., Horton, Lloyd T., Anderson, Michele Oskin, Collymore, Alville J., Ye, Wenjuan, Kouyoumjian, Vardouhie, Zemsteva, Irena S., Tam, James, Devine, Richard, Courtney, Dorothy F., Renaud, Michelle Turner, Nguyen, Huy, O'Connor, Tara J., Fizames, Cécile, Fauré, Sabine, Gyapay, Gabor, Dib, Colette, Morissette, Jean, Orlin, James B., Birren, Bruce W., Goodman, Nathan, Weissenbach, Jean, Hawkins, Trevor L., Foote, Simon, Page, David C., Lander, Eric S.

“…A physical map has been constructed of the human genome containing 15,086 sequence-tagged sites (STSs), with an average spacing of 199 kilobases. The project…”
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WormBase: a cross-species database for comparative genomics by Harris, Todd W., Lee, Raymond, Schwarz, Erich, Bradnam, Keith, Lawson, Daniel, Chen, Wen, Blasier, Darin, Kenny, Eimear, Cunningham, Fiona, Kishore, Ranjana, Chan, Juancarlos, Muller, Hans-Michael, Petcherski, Andrei, Thorisson, Gudmundur, Day, Allen, Bieri, Tamberlyn, Rogers, Anthony, Chen, Chao-Kung, Spieth, John, Sternberg, Paul, Durbin, Richard, Stein, Lincoln D.

“…WormBase (http://www.wormbase.org/) is a web-accessible central data repository for information about Caenorhabditis elegans and related nematodes. The past…”
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Genomewide Scan of Multiple Sclerosis in Finnish Multiplex Families by Kuokkanen, Satu, Gschwend, Michele, Rioux, John D., Daly, Mark J., Terwilliger, Joseph D., Tienari, Pentti J., Wikström, Juhani, Palo, Jorma, Stein, Lincoln D., Hudson, Thomas J., Lander, Eric S., Peltonen, Leena

“…Multiple sclerosis (MS) is a neurological, demyelinating disorder with a putative autoimmune etiology. It is thought to be a multifactorial disease with a…”
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