Search Results - "Square, Tyler"

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  1. 1

    Site pleiotropy of a stickleback Bmp6 enhancer by Rowley, Alyssa J., Square, Tyler A., Miller, Craig T.

    Published in Developmental biology (01-12-2022)
    “…Development and regeneration are orchestrated by gene regulatory networks that operate in part through transcriptional enhancers. Although many enhancers are…”
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    Journal Article
  2. 2

    BMP, Wnt and FGF signals are integrated through evolutionarily conserved enhancers to achieve robust expression of Pax3 and Zic genes at the zebrafish neural plate border by Garnett, Aaron T, Square, Tyler A, Medeiros, Daniel M

    Published in Development (Cambridge) (15-11-2012)
    “…Neural crest cells generate a range of cells and tissues in the vertebrate head and trunk, including peripheral neurons, pigment cells, and cartilage. Neural…”
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    Journal Article
  3. 3

    Evolved Bmp6 enhancer alleles drive spatial shifts in gene expression during tooth development in sticklebacks by Stepaniak, Mark D., Square, Tyler A., Miller, Craig T.

    Published in Genetics (Austin) (10-12-2021)
    “…Abstract Mutations in enhancers have been shown to often underlie natural variation but the evolved differences in enhancer activity can be difficult to…”
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    Journal Article
  4. 4

    Evolution of Spatial and Temporal cis-Regulatory Divergence in Sticklebacks by Mack, Katya L, Square, Tyler A, Zhao, Bin, Miller, Craig T, Fraser, Hunter B

    Published in Molecular biology and evolution (04-03-2023)
    “…Abstract Cis-regulatory changes are thought to play a major role in adaptation. Threespine sticklebacks have repeatedly colonized freshwater habitats in the…”
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    Journal Article
  5. 5

    Evolution of the endothelin pathway drove neural crest cell diversification by Square, Tyler A., Jandzik, David, Massey, James L., Romášek, Marek, Stein, Haley P., Hansen, Andrew W., Purkayastha, Amrita, Cattell, Maria V., Medeiros, Daniel M.

    Published in Nature (London) (24-09-2020)
    “…Neural crest cells (NCCs) are migratory, multipotent embryonic cells that are unique to vertebrates and form an array of clade-defining adult features. The…”
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    Journal Article
  6. 6

    Evolution of the new vertebrate head by co-option of an ancient chordate skeletal tissue by Jandzik, David, Garnett, Aaron T., Square, Tyler A., Cattell, Maria V., Yu, Jr-Kai, Medeiros, Daniel M.

    Published in Nature (London) (26-02-2015)
    “…A tissue with many of the defining features of vertebrate cellular cartilage is shown to form transiently in larvae of the invertebrate chordate amphioxus,…”
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    Journal Article
  7. 7

    Modulation of tooth regeneration through opposing responses to Wnt and BMP signals in teleosts by Square, Tyler A, Mackey, Emma J, Sundaram, Shivani, Weksler, Naama C, Chen, Zoe Z, Narayanan, Sujanya N, Miller, Craig T

    Published in Development (Cambridge) (01-12-2023)
    “…Most vertebrate species undergo tooth replacement throughout adult life. This process is marked by the shedding of existing teeth and the regeneration of tooth…”
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    Journal Article
  8. 8

    Distinct tooth regeneration systems deploy a conserved battery of genes by Square, Tyler A, Sundaram, Shivani, Mackey, Emma J, Miller, Craig T

    Published in EvoDevo (25-03-2021)
    “…Vertebrate teeth exhibit a wide range of regenerative systems. Many species, including most mammals, reptiles, and amphibians, form replacement teeth at a…”
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    Journal Article
  9. 9

    Roles for FGF in lamprey pharyngeal pouch formation and skeletogenesis highlight ancestral functions in the vertebrate head by Jandzik, David, Hawkins, M Brent, Cattell, Maria V, Cerny, Robert, Square, Tyler A, Medeiros, Daniel M

    Published in Development (Cambridge) (01-02-2014)
    “…A defining feature of vertebrates (craniates) is a pronounced head supported and protected by a cellularized endoskeleton. In jawed vertebrates (gnathostomes),…”
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    Journal Article
  10. 10

    Population Genomics of Variegated Toad-Headed Lizard Phrynocephalus versicolor and Its Adaptation to the Colorful Sand of the Gobi Desert by Jin, Yuanting, Aguilar-Gómez, Diana, Y C Brandt, Débora, Square, Tyler A, Li, Jiasheng, Liu, Zhengxia, Wang, Tao, Sudmant, Peter H, Miller, Craig T, Nielsen, Rasmus

    Published in Genome biology and evolution (02-07-2022)
    “…Abstract The variegated toad-headed agama, Phrynocephalus versicolor, lives in the arid landscape of the Chinese Gobi Desert. We analyzed populations from…”
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    Journal Article
  11. 11

    The origin and diversification of the developmental mechanisms that pattern the vertebrate head skeleton by Square, Tyler, Jandzik, David, Romášek, Marek, Cerny, Robert, Medeiros, Daniel Meulemans

    Published in Developmental biology (15-07-2017)
    “…The apparent evolvability of the vertebrate head skeleton has allowed a diverse array of shapes, sizes, and compositions of the head in order to better adapt…”
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    Journal Article
  12. 12

    A gene expression map of the larval Xenopus laevis head reveals developmental changes underlying the evolution of new skeletal elements by Square, Tyler, Jandzik, David, Cattell, Maria, Coe, Alex, Doherty, Jacob, Medeiros, Daniel Meulemans

    Published in Developmental biology (15-01-2015)
    “…The morphology of the vertebrate head skeleton is highly plastic, with the number, size, shape, and position of its components varying dramatically between…”
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    Journal Article
  13. 13

    Lamprey lecticans link new vertebrate genes to the origin and elaboration of vertebrate tissues by Root, Zachary D., Jandzik, David, Allen, Cara, Brewer, Margaux, Romášek, Marek, Square, Tyler, Medeiros, Daniel M.

    Published in Developmental biology (01-08-2021)
    “…The evolution of vertebrates from an invertebrate chordate ancestor involved the evolution of new organs, tissues, and cell types. It was also marked by the…”
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    Journal Article
  14. 14

    Evolution of vertebrate gill covers via shifts in an ancient Pou3f3 enhancer by Barske, Lindsey, Fabian, Peter, Hirschberger, Christine, Jandzik, David, Square, Tyler, Xu, Pengfei, Nelson, Nellie, Yu, Haoze Vincent, Medeiros, Daniel M., Gillis, J. Andrew, Crump, J. Gage

    “…Whereas the gill chambers of jawless vertebrates open directly into the environment, jawed vertebrates evolved skeletal appendages that drive oxygenated water…”
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    Journal Article
  15. 15

    Embryonic expression of endothelins and their receptors in lamprey and frog reveals stem vertebrate origins of complex Endothelin signaling by Square, Tyler, Jandzik, David, Cattell, Maria, Hansen, Andrew, Medeiros, Daniel Meulemans

    Published in Scientific reports (28-09-2016)
    “…Neural crest cells (NCCs) are highly patterned embryonic cells that migrate along stereotyped routes to give rise to a diverse array of adult tissues and cell…”
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    Journal Article
  16. 16

    CRISPR/Cas9-mediated mutagenesis in the sea lamprey Petromyzon marinus: a powerful tool for understanding ancestral gene functions in vertebrates by Square, Tyler, Romášek, Marek, Jandzik, David, Cattell, Maria V, Klymkowsky, Michael, Medeiros, Daniel M

    Published in Development (Cambridge) (01-12-2015)
    “…Lamprey is one of only two living jawless vertebrates, a group that includes the first vertebrates. Comparisons between lamprey and jawed vertebrates have…”
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    Journal Article
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    Neural Crest Cell Development and Evolution by Square, Tyler Alexander

    Published 2017
    “…Neural crest cells play a major role in vertebrate development and evolution. Both the appearance and diversification of these cells have been evoked as a…”
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    Dissertation