Search Results - "Sokolov, Petr A"
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Design of a New [ PSI + ]-No-More Mutation in SUP35 With Strong Inhibitory Effect on the [ PSI + ] Prion Propagation
Published in Frontiers in molecular neuroscience (19-11-2019)“…A number of [ ]-no-more (PNM) mutations, eliminating [ ] prion, were previously described in . In this study, we designed and analyzed a new PNM mutation based…”
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The binding model of adenosine-specific DNA aptamer: Umbrella sampling study
Published in Journal of molecular graphics & modelling (01-01-2023)“…We report a novel model of the selective binding mechanism of adenosine-specific DNA aptamer. Our theoretical investigations of AMP (Adenosine monophosphate)…”
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Hybridization-Driven Adsorption of Polyadenine DNA onto Gold Nanoparticles
Published in Langmuir (20-12-2022)“…The attachment of functional DNA to gold nanoparticles via polyadenine adsorption is a well-established technology. This approach was mainly viewed through the…”
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QM/MM-MD dissociation of Ag+ and H+ mediated cytosine pairs: Monomers and dimers
Published in Journal of organometallic chemistry (15-07-2020)“…We report a biased QM/MM molecular dynamics study of the dissociation process of cytosine-cytosine complexes mediated by Ag+ or H+ ions in monomeric and…”
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Stabilization of DNA by sodium and magnesium ions during the synthesis of DNA-bridged gold nanoparticles
Published in Nanotechnology (22-01-2021)“…Nanostructures synthesized using DNA-conjugated gold nanoparticles have a wide range of applications in the field of biosensorics. The stability of the DNA…”
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Amyloid fibril length distribution from dynamic light scattering data
Published in European biophysics journal (01-07-2022)“…The study of the aggregation of amyloid proteins is challenging. A new approach to processing dynamic light scattering data was developed and tested using…”
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Intersystem crossing rates of violet-, green- and red-emitting DNA stabilized silver luminescent clusters
Published in Chemical physics letters (16-11-2022)“…[Display omitted] •The theoretical estimation of the effectiveness of reaching the long-lived triplet state by calculating the intersystem crossing rate…”
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Intersystem crossing rate of C60-tryptophan
Published in Chemical physics letters (16-11-2022)“…[Display omitted] •The ISC rate of the T1→S0 process is too tiny for C60-Trp to carry fast nonradiative relaxation of the T1 state.•The ISC rate of…”
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Molecular dynamics study of complexes of a DNA aptamer with AMP and GMP
Published in Kompʹûternye issledovaniâ i modelirovanie (Online) (01-12-2021)Get full text
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