Search Results - "Sofer, Danit"
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Surveillance and Diagnosis of West Nile Virus in the Face of Flavivirus Cross-Reactivity
Published in Frontiers in microbiology (11-10-2018)“…West Nile Virus (WNV) is an arthropod-borne flavivirus whose zoonotic cycle includes both mosquitoes and birds as amplifiers and humans and horses as dead-end…”
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Testing IgG antibodies against the RBD of SARS-CoV-2 is sufficient and necessary for COVID-19 diagnosis
Published in PloS one (23-11-2020)“…The COVID-19 pandemic and the fast global spread of the disease resulted in unprecedented decline in world trade and travel. A critical priority is, therefore,…”
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Comparison of the new fully automated extraction platform eMAG to the MagNA PURE 96 and the well-established easyMAG for detection of common human respiratory viruses
Published in PloS one (19-02-2019)“…Respiratory viral infections constitute the majority of samples tested in the clinical virology laboratory during the winter season, and are mainly diagnosed…”
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Genomic variation and epidemiology of SARS-CoV-2 importation and early circulation in Israel
Published in PloS one (26-03-2021)“…Severe acute respiratory disease coronavirus 2 (SARS-CoV-2) which causes corona virus disease (COVID-19) was first identified in Wuhan, China in December 2019…”
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Evaluation of four different systems for extraction of RNA from stool suspensions using MS-2 coliphage as an exogenous control for RT-PCR inhibition
Published in PloS one (16-07-2012)“…Knowing when, and to what extent co-extracted inhibitors interfere with molecular RNA diagnostic assays is of utmost importance. The QIAamp Viral RNA Mini Kit…”
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National Scale Real-Time Surveillance of SARS-CoV-2 Variants Dynamics by Wastewater Monitoring in Israel
Published in Viruses (06-06-2022)“…In this report, we describe a national-scale monitoring of the SARS-CoV-2 (SC-2) variant dynamics in Israel, using multiple-time sampling of 13 wastewater…”
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Rapid and High-Throughput Reverse Transcriptase Quantitative PCR (RT-qPCR) Assay for Identification and Differentiation between SARS-CoV-2 Variants B.1.1.7 and B.1.351
Published in Microbiology spectrum (31-10-2021)“…Emerging SARS-CoV-2 (SC-2) variants with increased infectivity and vaccine resistance are of major concern. Rapid identification of such variants is important…”
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Evolution of echovirus 11 in a chronically infected immunodeficient patient
Published in PLoS pathogens (01-03-2018)“…Deep sequencing was used to determine complete nucleotide sequences of echovirus 11 (EV11) strains isolated from a chronically infected patient with CVID as…”
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The Israeli public health response to wild poliovirus importation
Published in The Lancet infectious diseases (01-10-2015)“…Summary In 2013, a silent wild poliovirus type 1 importation and sustained transmission event occurred in southern Israel. With the aim of preventing clinical…”
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Epidemiology of Type 3 Poliovirus AFP Cases in Israel between 1973 and 1988: Whole Genome Sequencing of RNA Extracted Directly from Archived Stocks to Avoid Re-Culturing Neurovirulent Wild Poliovirus
Published in Vaccines (Basel) (01-12-2022)“…Poliovirus post-eradication containment of wild-type 2 poliovirus (PV2) requires the destruction of all materials containing, or potentially containing, PV2…”
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Monitoring of Enterovirus D68 Outbreak in Israel by a Parallel Clinical and Wastewater Based Surveillance
Published in Viruses (09-05-2022)“…Enterovirus D68 (EVD68) was recently identified as an important cause of respiratory illness and acute flaccid myelitis (AFM), mostly in children. Here, we…”
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Specific Detection of SARS-CoV-2 Variants B.1.1.7 (Alpha) and B.1.617.2 (Delta) Using a One-Step Quantitative PCR Assay
Published in Microbiology spectrum (27-04-2022)“…In this report, we describe the development of a reverse transcription-quantitative PCR (RT-qPCR) assay, termed Alpha-Delta assay, which can detect all severe…”
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First report of a persistent oropharyngeal infection of type 2 vaccine-derived poliovirus (iVDPV2) in a primary immune deficient (PID) patient after eradication of wild type 2 poliovirus
Published in International journal of infectious diseases (01-06-2019)“…•Persistent poliovirus infections occur in primary immune deficient patients.•Type 2 poliovirus was isolated from throat swabs and stools of such a…”
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Modeling the spread of polio in an IPV-vaccinated population: lessons learned from the 2013 silent outbreak in southern Israel
Published in BMC medicine (23-06-2016)“…Polio eradication is an extraordinary globally coordinated health program in terms of its magnitude and reach, leading to the elimination of wild poliovirus…”
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A Multi-Laboratory Evaluation of Commercial Monkeypox Virus Molecular Tests
Published in Microbiology spectrum (15-06-2023)“…In this report, we describe the first national scale multi-laboratory evaluation of monkeypox virus (MPXV) DNA commercial PCR kits. The objective of this study…”
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Neurovirulent vaccine-derived polioviruses in sewage from highly immune populations
Published in PloS one (20-12-2006)“…Vaccine-derived polioviruses (VDPVs) have caused poliomyelitis outbreaks in communities with sub-optimal vaccination. Israeli environmental surveillance of…”
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Inferring Numbers of Wild Poliovirus Excretors Using Quantitative Environmental Surveillance
Published in Vaccines (Basel) (06-08-2021)“…Response to and monitoring of viral outbreaks can be efficiently focused when rapid, quantitative, kinetic information provides the location and the number of…”
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Antiviral activity of 3(2H)- and 6-chloro-3(2H)-isoflavenes against highly diverged, neurovirulent vaccine-derived, type2 poliovirus sewage isolates
Published in PloS one (2011)“…Substituted flavanoids interfere with uncoating of Enteroviruses including Sabin-2 polio vaccine strains. However flavanoid resistant and dependent, type-2…”
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Detection of SARS-CoV-2 variants by genomic analysis of wastewater samples in Israel
Published in The Science of the total environment (01-10-2021)“…Investigation of SARS-CoV-2 spread and identification of variants in sewers has been demonstrated to accurately detect prevalence of viral strains and is…”
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'Subinhibitory' erythromycin represses production of Pseudomonas aeruginosa lectins, autoinducer and virulence factors
Published in Chemotherapy (Basel) (01-09-1999)“…Pseudomonas aeruginosa infection is preceded by selective adhesion of the bacteria to the host target cells via diverse adhesins, including lectins. This step…”
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