Search Results - "Soddemann, Thomas"

Dissipative particle dynamics: a useful thermostat for equilibrium and nonequilibrium molecular dynamics simulations by Soddemann, Thomas, Dünweg, Burkhard, Kremer, Kurt

“…We discuss dissipative particle dynamics as a thermostat to molecular dynamics, and highlight some of its virtues: (i) universal applicability irrespective of…”
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Multicore Processors and Graphics Processing Unit Accelerators for Parallel Retrieval of Aerosol Optical Depth From Satellite Data: Implementation, Performance, and Energy Efficiency by Liu, Jia, Feld, Dustin, Xue, Yong, Garcke, Jochen, Soddemann, Thomas

“…Quantitative retrieval is a growing area in remote sensing due to the rapid development of remote instruments and retrieval algorithms. The aerosol optical…”
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Science gateways to DEISA: user requirements, technologies, and the material sciences and plasma physics gateway by Soddemann, Thomas

“…DEISA (Distributed European Infrastructure for Supercomputer Applications) is collecting experience with science gateways in different scientific areas and…”
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Pure Functions in C: A Small Keyword for Automatic Parallelization by Süß, Tim, Nagel, Lars, Vef, Marc-André, Brinkmann, André, Feld, Dustin, Soddemann, Thomas

“…The need for parallel task execution has been steadily growing in recent years since manufacturers mainly improve processor performance by increasing the…”
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An efficient geosciences workflow on multi-core processors and GPUs: a case study for aerosol optical depth retrieval from MODIS satellite data by Liu, Jia, Feld, Dustin, Xue, Yong, Garcke, Jochen, Soddemann, Thomas, Pan, Peiyuan

“…Quantitative remote sensing retrieval algorithms help understanding the dynamic aspects of Digital Earth. However, the Big Data and complex models in Digital…”
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UNICORE 6 — Recent and Future Advancements by Streit, Achim, Bala, Piotr, Beck-Ratzka, Alexander, Benedyczak, Krzysztof, Bergmann, Sandra, Breu, Rebecca, Daivandy, Jason Milad, Demuth, Bastian, Eifer, Anastasia, Giesler, André, Hagemeier, Björn, Holl, Sonja, Huber, Valentina, Lamla, Nadine, Mallmann, Daniel, Memon, Ahmed Shiraz, Memon, Mohammad Shahbaz, Rambadt, Michael, Riedel, Morris, Romberg, Mathilde, Schuller, Bernd, Schlauch, Tobias, Schreiber, Andreas, Soddemann, Thomas, Ziegler, Wolfgang

“…UNICORE is a European Grid Technology with more than 10 years of history. Originating from the Supercomputing domain, the latest version UNICORE 6 has turned…”
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Pure Functions in C: A Small Keyword for Automatic Parallelization by Suss, Tim, Nagel, Lars, Vef, Marc-Andre, Brinkmann, Andre, Feld, Dustin, Soddemann, Thomas

“…The need for parallel task execution has been steadily growing in recent years since manufacturers mainly improve processor performance by scaling the number…”
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MIGenAS integrated bioinformatics toolkit for web-based sequence analysis by Rampp, Markus, Soddemann, Thomas, Lederer, Hermann

“…We describe a versatile and extensible integrated bioinformatics toolkit for the analysis of biological sequences over the Internet. The web portal offers…”
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VarySched: A Framework for Variable Scheduling in Heterogeneous Environments by Suss, Tim, Doring, Nils, Gad, Ramy, Nagel, Lars, Brinkmann, Andre, Feld, Dustin, Soddemann, Thomas, Lankes, Stefan

“…Despite many efforts to better utilize the potential of GPUs and CPUs, it is far from being fully exploited. Although many tasks can be easily sped up by using…”
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Structure of Poly(dimethylsiloxane) Melts:  Theory, Simulation, and Experiment by Sides, Scott W, Curro, John, Grest, Gary S, Stevens, Mark J, Soddemann, Thomas, Habenschuss, A, Londono, J. D

“…Molecular dynamics simulations, integral equation theory, and wide-angle X-ray scattering experiments are used to study the structure of a…”
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UNICORE 6 - Recent and Future Advancements : Towards market-oriented Clouds by STREIT, Achim, BALA, Piotr, HAGEMEIER, Björn, HOLL, Sonja, HUBER, Valentina, LAMLA, Nadine, MALLMANN, Daniel, SHIRAZ MEMON, Ahmed, SHAHBAZ MEMON, Mohammad, RAMBADT, Michael, RIEDEL, Morris, ROMBERG, Mathilde, BECK-RATZKA, Alexander, SCHULLER, Bernd, SCHLAUCH, Tobias, SCHREIBER, Andreas, SODDEMANN, Thomas, ZIEGLER, Wolfgang, BENEDYCZAK, Krzysztof, BERGMANN, Sandra, BREU, Rebecca, MILAD DAIVANDY, Jason, DEMUTH, Bastian, EIFER, Anastasia, GIESLER, André

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Using LAMA for efficient AMG on hybrid clusters by Kraus, Jiri, Förster, Malte, Brandes, Thomas, Soddemann, Thomas

“…In this paper, we describe the implementation of an AMG solver for a hybrid cluster that exploits distributed and shared memory parallelization and uses the…”
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Nonequilibrium molecular dynamics simulation of shear-induced alignment of amphiphilic model systems by Guo, Hongxia, Kremer, Kurt, Soddemann, Thomas

“…We study the shear-induced alignment transition from transverse to the shear plane to parallel and perpendicular in a lamellar or smectics system. A recently…”
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Multicore Processors and Graphics Processing Unit Accelerators for Parallel Retrieval of Aerosol Optical Depth From Satellite Data: Implementation, Performance, and Energy Efficiency by Liu, Jia, Feld, Dustin, Xue, Yong, Garcke, Jochen, Soddemann, Thomas

“…Quantitative retrieval is a growing area in remote sensing due to the rapid development of remote instruments and retrieval algorithms. The aerosol optical…”
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Design and Implementation of a Distributed Metascheduler by Heilgeist, J., Soddemann, T., Richter, H.

“…The paper describes a metascheduler for high-performance computing (HPC) grids that is build upon a distributed architecture. It is modelled around cooperating…”
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Science gateway, portal and other community interfaces to high end resources by Wilkins-Diehr, Nancy R, Soddemann, Thomas

“…Increasingly, scientists are using portals and desktop applications as "gateways" to access computational capabilities, information services, data collections,…”
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Algorithms for Job and Resource Discovery for the Meta-Scheduler of the DEISA Grid by Heilgeist, J., Soddemann, T., Richter, H.

“…This paper describes a distributed meta-scheduling architecture for the DEISA grid in which site-local proxies migrate jobs between the participating sites…”
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Exploring the hyper-grid idea with grand challenge applications: the DEISA-TeraGrid interoperability demonstration by Andrews, P., Buechli, M., Harkness, R., Hatzky, R., Jordan, C., Lederer, H., Niederberger, R., Rimovsky, A., Schott, A., Soddemann, T., Springel, V.

“…A supercomputing hyper-grid spanning two continents was created to move a step towards interoperability of leading grids. A dedicated network connection was…”
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