Search Results - "Soares, Siomar C."

An In Silico Identification of Common Putative Vaccine Candidates against Treponema pallidum: A Reverse Vaccinology and Subtractive Genomics Based Approach by Kumar Jaiswal, Arun, Tiwari, Sandeep, Jamal, Syed Babar, Barh, Debmalya, Azevedo, Vasco, Soares, Siomar C

“…Sexually transmitted infections (STIs) are caused by a wide variety of bacteria, viruses, and parasites that are transmitted from one person to another…”
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The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains by Soares, Siomar C, Silva, Artur, Trost, Eva, Blom, Jochen, Ramos, Rommel, Carneiro, Adriana, Ali, Amjad, Santos, Anderson R, Pinto, Anne C, Diniz, Carlos, Barbosa, Eudes G V, Dorella, Fernanda A, Aburjaile, Flávia, Rocha, Flávia S, Nascimento, Karina K F, Guimarães, Luís C, Almeida, Sintia, Hassan, Syed S, Bakhtiar, Syeda M, Pereira, Ulisses P, Abreu, Vinicius A C, Schneider, Maria P C, Miyoshi, Anderson, Tauch, Andreas, Azevedo, Vasco

“…Corynebacterium pseudotuberculosis is a facultative intracellular pathogen and the causative agent of several infectious and contagious chronic diseases,…”
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The pan-genome of Treponema pallidum reveals differences in genome plasticity between subspecies related to venereal and non-venereal syphilis by Jaiswal, Arun Kumar, Tiwari, Sandeep, Jamal, Syed Babar, de Castro Oliveira, Letícia, Alves, Leandro Gomes, Azevedo, Vasco, Ghosh, Preetam, Oliveira, Carlo Jose Freira, Soares, Siomar C

“…Spirochetal organisms of the Treponema genus are responsible for causing Treponematoses. Pathogenic treponemes is a Gram-negative, motile, spirochete pathogen…”
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Analyses of the probiotic property and stress resistance-related genes of Lactococcus lactis subsp. lactis NCDO 2118 through comparative genomics and in vitro assays by Oliveira, Letícia C, Saraiva, Tessália D L, Silva, Wanderson M, Pereira, Ulisses P, Campos, Bruno C, Benevides, Leandro J, Rocha, Flávia S, Figueiredo, Henrique C P, Azevedo, Vasco, Soares, Siomar C

“…Lactococcus lactis subsp. lactis NCDO 2118 was recently reported to alleviate colitis symptoms via its anti-inflammatory and immunomodulatory activities, which…”
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Comparative genomics reveals high genetic similarity among strains of Salmonella enterica serovar Infantis isolated from multiple sources in Brazil by Vilela, Felipe P, Felice, Andrei G, Seribelli, Amanda A, Rodrigues, Dália P, Soares, Siomar C, Allard, Marc W, Falcão, Juliana P

“…serovar Infantis ( Infantis) is a zoonotic, ubiquitous and foodborne pathogen of worldwide distribution. Despite Brazil's relevance as a major meat exporter,…”
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Pan-genomic analysis of Corynebacterium amycolatum gives insights into molecular mechanisms underpinning the transition to a pathogenic phenotype by Jesus, Hendor N. R., Rocha, Danilo J. P. G., Ramos, Rommel T. J., Silva, Artur, Brenig, Bertram, Góes-Neto, Aristóteles, Costa, Mateus M., Soares, Siomar C., Azevedo, Vasco, Aguiar, Eric R. G. R., Martínez-Martínez, Luiz, Ocampo, Alain, Alibi, Sana, Dorta, Alexis, Pacheco, Luis G. C., Navas, Jesus

“…Corynebacterium amycolatum is a nonlipophilic coryneform which is increasingly being recognized as a relevant human and animal pathogen showing multidrug…”
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PIPS: pathogenicity island prediction software by Soares, Siomar C, Abreu, Vinícius A C, Ramos, Rommel T J, Cerdeira, Louise, Silva, Artur, Baumbach, Jan, Trost, Eva, Tauch, Andreas, Hirata, Jr, Raphael, Mattos-Guaraldi, Ana L, Miyoshi, Anderson, Azevedo, Vasco

“…The adaptability of pathogenic bacteria to hosts is influenced by the genomic plasticity of the bacteria, which can be increased by such mechanisms as…”
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Label-free quantitative proteomics of Corynebacterium pseudotuberculosis isolates reveals differences between Biovars ovis and equi strains by Silva, Wanderson M, Folador, Edson L, Soares, Siomar C, Souza, Gustavo H M F, Santos, Agenor V, Sousa, Cassiana S, Figueiredo, Henrique, Miyoshi, Anderson, Le Loir, Yves, Silva, Artur, Azevedo, Vasco

“…Background Corynebacterium pseudotuberculosis is a pathogen classified into two biovars: C. pseudotuberculosis biovar ovis, the etiologic agent of caseous…”
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Phylogenetic analysis revealed that Salmonella Typhimurium ST313 isolated from humans and food in Brazil presented a high genomic similarity by Seribelli, Amanda Ap, Gonzales, Júlia C., de Almeida, Fernanda, Benevides, Leandro, Cazentini Medeiros, Marta I., dos Prazeres Rodrigues, Dália, de C. Soares, Siomar, Allard, Marc W., Falcão, Juliana P.

“…Salmonella Typhimurium sequence type 313 ( S. Typhimurium ST313) has caused invasive disease mainly in sub-Saharan Africa. In Brazil, ST313 strains have been…”
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An insight into the salivary gland and fat body transcriptome of Panstrongylus lignarius (Hemiptera: Heteroptera), the main vector of Chagas disease in Peru by Nevoa, Jessica C, Mendes, Maria T, da Silva, Marcos V, Soares, Siomar C, Oliveira, Carlo J F, Ribeiro, José M C

“…Triatomines are hematophagous arthropod vectors of Trypanosoma cruzi, the causative agent of Chagas Disease. Panstrongylus lignarius, also known as…”
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Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors by Trost, Eva, Al-Dilaimi, Arwa, Papavasiliou, Panagiotis, Schneider, Jessica, Viehoever, Prisca, Burkovski, Andreas, Soares, Siomar C, Almeida, Sintia S, Dorella, Fernanda A, Miyoshi, Anderson, Azevedo, Vasco, Schneider, Maria P, Silva, Artur, Santos, Cíntia S, Santos, Louisy S, Sabbadini, Priscila, Dias, Alexandre A, Hirata, Jr, Raphael, Mattos-Guaraldi, Ana L, Tauch, Andreas

“…Corynebacterium ulcerans has been detected as a commensal in domestic and wild animals that may serve as reservoirs for zoonotic infections. During the last…”
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Systematic review of reverse vaccinology and immunoinformatics data for non-viral sexually transmitted infections by Gomes, Lucas Gabriel R, Dutra, Joyce C F, Profeta, Rodrigo, Dias, Mariana V, García, Glen J Y, Rodrigues, Diego Lucas N, Goés Neto, Aristóteles, Aburjaile, Flávia F, Tiwari, Sandeep, Soares, Siomar C, Azevedo, Vasco, Jaiswal, Arun K

“…Sexually Transmitted Infections (STIs) are a public health burden rising in developed and developing nations. The World Health Organization estimates nearly…”
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In silico designing of a recombinant multi-epitope antigen for leprosy diagnosis by Lemes, Marcela Rezende, Rodrigues, Thaís Cristina Vilela, Jaiswal, Arun Kumar, Tiwari, Sandeep, Sales-Campos, Helioswilton, Andrade-Silva, Leonardo Eurípedes, Oliveira, Carlo Jose Freire

“…Background Leprosy is caused by Mycobacterium leprae and Mycobacterium lepromatosis. Most of the affected population lives in low-income countries and may take…”
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Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis by Jaiswal, Arun Kumar, Tiwari, Sandeep, Jamal, Syed Babar, Oliveira, Letícia de Castro, Sales-Campos, Helioswilton, Andrade-Silva, Leonardo Eurípedes, Oliveira, Carlo Jose Freire, Ghosh, Preetam, Barh, Debmalya, Azevedo, Vasco, Soares, Siomar C, Rodrigues, Virmondes Rodrigues, da Silva, Marcos Vinicius

“…and are gram-positive bacterial pathogens and the causative agents of leprosy in humans across the world. The elimination of leprosy cannot be achieved by…”
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Label-free proteomic analysis to confirm the predicted proteome of Corynebacterium pseudotuberculosis under nitrosative stress mediated by nitric oxide by Silva, Wanderson M, Carvalho, Rodrigo D, Soares, Siomar C, Bastos, Isabela Fs, Folador, Edson L, Souza, Gustavo Hmf, Le Loir, Yves, Miyoshi, Anderson, Silva, Artur, Azevedo, Vasco

“…Corynebacterium pseudotuberculosis biovar ovis is a facultative intracellular pathogen, and the etiological agent of caseous lymphadenitis in small ruminants…”
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Complete Genome Sequence of Corynebacterium pseudotuberculosis I19, a Strain Isolated from a Cow in Israel with Bovine Mastitis by Silva, Artur, Schneider, Maria Paula C, Cerdeira, Louise, Barbosa, Maria Silvanira, Ramos, Rommel Thiago J, Carneiro, Adriana R, Santos, Rodrigo, Lima, Marília, D'Afonseca, Vivian, Almeida, Sintia S, Santos, Anderson R, Soares, Siomar C, Pinto, Anne C, Ali, Amjad, Dorella, Fernanda A, Rocha, Flavia, de Abreu, Vinicius Augusto Carvalho, Trost, Eva, Tauch, Andreas, Shpigel, Nahum, Miyoshi, Anderson, Azevedo, Vasco

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Characterization of a new multidrug-resistant Brazilian K. pneumoniae isolate and 172 Klebsiella spp. sequenced strains: Genomic island, multilocus sequence typing and capsule locus dataset by Profeta, Rodrigo, Seyffert, Núbia, Tiwari, Sandeep, Viana, Marcus V.C., Jaiswal, Arun Kumar, Caetano, Ana Carolina, Bücker, Daniel Henrique, de Oliveira, Luciana Tavares, Santos, Roselane, Gala-Garcia, Alfonso, Kato, Rodrigo B., Padilha, Francine F., Lima-Verde, Isabel B., Ghosh, Preetam, Barh, Debmalya, Góes-Neto, Aristóteles, Figueiredo, Henrique C.P., Soares, Siomar C., Meyer, Roberto, Brenig, Bertram, Ramos, Pablo I.P., Azevedo, Vasco, Castro, Thiago L.P.

“…The genus Klebsiella comprises species that cause nosocomial and community-acquired infections. A dataset was created to compile the sequence type (ST) and…”
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Complete Genome Sequence of Corynebacterium pseudotuberculosis Strain 1/06-A, Isolated from a Horse in North America by Pethick, Florence E, Lainson, Alex F, Yaga, Raja, Flockhart, Allen, Smith, David G. E, Donachie, Willie, Cerdeira, Louise T, Silva, Artur, Bol, Erik, Lopes, Thiago S, Barbosa, Maria S, Pinto, Anne C, dos Santos, Anderson R, Soares, Siomar C, Almeida, Sintia S, Guimaraes, Luis C, Aburjaile, Flavia F, Abreu, Vinicius A. C, Ribeiro, Dayana, Fiaux, Karina K, Diniz, Carlos A. A, Barbosa, Eudes G. V, Pereira, Ulisses P, Hassan, Syed S, Ali, Amjad, Bakhtiar, Syeda M, Dorella, Fernanda A, Carneiro, Adriana R, Ramos, Rommel T. J, Rocha, Flavia S, Schneider, Maria P. C, Miyoshi, Anderson, Azevedo, Vasco, Fontaine, Michael C

“…Corynebacterium pseudotuberculosis causes disease in several animal species, although distinct biovars exist that appear to be restricted to specific hosts. In…”
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Computational identification of putative common genomic drug and vaccine targets in Mycoplasma genitalium by Nogueira, Wylerson G., Jaiswal, Arun Kumar, Tiwari, Sandeep, Ramos, Rommel T.J., Ghosh, Preetam, Barh, Debmalya, Azevedo, Vasco, Soares, Siomar C.

“…Mycoplasma genitalium is an obligate intracellular bacterium that is responsible for several sexually transmitted infections, including non-gonococcal…”
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GIPSy: Genomic island prediction software by Soares, Siomar C., Geyik, Hakan, Ramos, Rommel T.J., de Sá, Pablo H.C.G., Barbosa, Eudes G.V., Baumbach, Jan, Figueiredo, Henrique C.P., Miyoshi, Anderson, Tauch, Andreas, Silva, Artur, Azevedo, Vasco

“…•The first life-style-specific GEI prediction software to predict all classes of GEIs.•GIPSy predicted 13 pathogenicity islands of Escherichia coli…”
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