Search Results - "Smirnova, Tatyana"

The genome portal of the Department of Energy Joint Genome Institute: 2014 updates by Nordberg, Henrik, Cantor, Michael, Dusheyko, Serge, Hua, Susan, Poliakov, Alexander, Shabalov, Igor, Smirnova, Tatyana, Grigoriev, Igor V, Dubchak, Inna

“…The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a national user facility, serves the diverse scientific community by providing integrated…”
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Surface-Mediated Production of Hydroxyl Radicals as a Mechanism of Iron Oxide Nanoparticle Biotoxicity by Voinov, Maxim A, Pagán, Jason O. Sosa, Morrison, Erin, Smirnova, Tatyana I, Smirnov, Alex I

“…Emerging applications of nanosized iron oxides in nanotechnology introduce vast quantities of nanomaterials into the human environment, thus raising some…”
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Changes in metabolic landscapes shape divergent but distinct mutational signatures and cytotoxic consequences of redox stress by Degtyareva, Natalya P, Placentra, Victoria C, Gabel, Scott A, Klimczak, Leszek J, Gordenin, Dmitry A, Wagner, Brett A, Buettner, Garry R, Mueller, Geoffrey A, Smirnova, Tatyana I, Doetsch, Paul W

“…Abstract Mutational signatures discerned in cancer genomes, in aging tissues and in cells exposed to toxic agents, reflect complex processes underlying…”
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Glycol Chitosan Engineered Autoregenerative Antioxidant Significantly Attenuates Pathological Damages in Models of Age-Related Macular Degeneration by Mitra, Rajendra N., Gao, Ruijuan, Zheng, Min, Wu, Ming-Jing, Voinov, Maxim A., Smirnov, Alex I., Smirnova, Tatyana I., Wang, Kai, Chavala, Sai, Han, Zongchao

“…Age-related macular degeneration (AMD) is the foremost cause of irreversible blindness in people over the age of 65 especially in developing countries…”
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Dielectric and Electrostatic Properties of the Silica Nanoparticle–Water Interface by EPR of pH-Sensitive Spin Probes by Perelygin, Vladislav, Voinov, Maxim A, Marek, Antonin, Ou, Erkang, Krim, Jacqueline, Brenner, Donald, Smirnova, Tatyana I, Smirnov, Alex I

“…Interfacial electrostatic properties of monodisperse silica nanoparticles (SiNPs) in aqueous suspensions as a function of bulk pH were characterized by spin…”
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The Hydroxyl Radical is a Critical Intermediate in the Voltammetric Detection of Hydrogen Peroxide by Roberts, James G, Voinov, Maxim A, Schmidt, Andreas C, Smirnova, Tatyana I, Sombers, Leslie A

“…Cyclic voltammetry is a widely used and powerful tool for sensitively and selectively measuring hydrogen peroxide (H2O2). Herein, voltammetry was combined with…”
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Membrane composition drives sidechain ionization and assembly of transmembrane protein domains by Smirnova, Tatyana I., Voinov, Maxim A., Milikisiyants, Sergey, Cook, Gabriel A., Smirnov, Alex I.

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Oligomeric Structure of Anabaena Sensory Rhodopsin in a Lipid Bilayer Environment by Combining Solid-State NMR and Long-range DEER Constraints by Milikisiyants, Sergey, Wang, Shenlin, Munro, Rachel A., Donohue, Matthew, Ward, Meaghan E., Bolton, David, Brown, Leonid S., Smirnova, Tatyana I., Ladizhansky, Vladimir, Smirnov, Alex I.

“…Oligomerization of membrane proteins is common in nature. Here, we combine spin-labeling double electron–electron resonance (DEER) and solid-state NMR (ssNMR)…”
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Elucidating the Reaction Pathway of Decarboxylation-Assisted Olefination Catalyzed by a Mononuclear Non-Heme Iron Enzyme by Yu, Cheng-Ping, Tang, Yijie, Cha, Lide, Milikisiyants, Sergey, Smirnova, Tatyana I, Smirnov, Alex I, Guo, Yisong, Chang, Wei-chen

“…Installation of olefins into molecules is a key transformation in organic synthesis. The recently discovered decarboxylation-assisted olefination in the…”
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EPR Oximetry with Nitroxides: Effects of Molecular Structure, pH, and Electrolyte Concentration by Voinov, Maxim A., Smirnova, Tatyana I., Smirnov, Alex I.

“…Nitroxide spin probes and spin labels are broadly utilized in EPR oximetry studies ranging from in vivo investigation to profiling heterogeneous environment of…”
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Copper-Organic/Octamolybdates: Structures, Bandgap Sizes, and Photocatalytic Activities by Luo, Lan, Lin, Haisheng, Li, Le, Smirnova, Tatyana I, Maggard, Paul A

“…The structures, optical bandgap sizes, and photocatalytic activities are described for three copper–octamolybdate hybrid solids prepared using hydrothermal…”
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Manganese–Vanadate Hybrids: Impact of Organic Ligands on Their Structures, Thermal Stabilities, Optical Properties, and Photocatalytic Activities by Luo, Lan, Zeng, Yuhan, Li, Le, Luo, Zhixiang, Smirnova, Tatyana I, Maggard, Paul A

“…Manganese­(II)–vanadate­(V)/organic hybrids were prepared in high purity using four different N-donor organic ligands (2,6:2′,2″-terpyridine = terpy,…”
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes by Chen, I-Min A, Chu, Ken, Palaniappan, Krishna, Pillay, Manoj, Ratner, Anna, Huang, Jinghua, Huntemann, Marcel, Varghese, Neha, White, James R, Seshadri, Rekha, Smirnova, Tatyana, Kirton, Edward, Jungbluth, Sean P, Woyke, Tanja, Eloe-Fadrosh, Emiley A, Ivanova, Natalia N, Kyrpides, Nikos C

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Pyridine Inhibitor Binding to the 4Fe-4S Protein A. aeolicus IspH (LytB): A HYSCORE Investigation by Wang, Weixue, Li, Jikun, Wang, Ke, Smirnova, Tatyana I, Oldfield, Eric

“…IspH is a 4Fe-4S protein that carries out an essential reduction step in isoprenoid biosynthesis. Using hyperfine sublevel correlation (HYSCORE) spectroscopy,…”
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Peptide-Membrane Interactions by Spin-Labeling EPR by Smirnova, Tatyana I, Smirnov, Alex I

“…Site-directed spin labeling (SDSL) in combination with electron paramagnetic resonance (EPR) spectroscopy is a well-established method that has recently grown…”
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Synthesis of New Mixed-Metal Ammonium Vanadates: Cation Order versus Disorder, and Optical and Photocatalytic Properties by Luo, Lan, Ou, Erkang, Smirnova, Tatyana I, Maggard, Paul A

“…Two new ammonium vanadate hydrates, i.e., M3(H2O)2V8O24­·2NH4 (M = Mn and Co, I and II, respectively) were synthesized using hydrothermal reaction conditions,…”
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Integrative structural dynamics probing of the conformational heterogeneity in synaptosomal-associated protein 25 by Saikia, Nabanita, Yanez-Orozco, Inna S., Qiu, Ruoyi, Hao, Pengyu, Milikisiyants, Sergey, Ou, Erkang, Hamilton, George L., Weninger, Keith R., Smirnova, Tatyana I., Sanabria, Hugo, Ding, Feng

“…SNAP-25 (synaptosomal-associated protein of 25 kDa) is a prototypical intrinsically disordered protein (IDP) that is unstructured by itself but forms…”
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Spontaneous Switching among Conformational Ensembles in Intrinsically Disordered Proteins by Choi, Ucheor B, Sanabria, Hugo, Smirnova, Tatyana, Bowen, Mark E, Weninger, Keith R

“…The common conception of intrinsically disordered proteins (IDPs) is that they stochastically sample all possible configurations driven by thermal…”
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An ENDOR and HYSCORE Investigation of a Reaction Intermediate in IspG (GcpE) Catalysis by Wang, Weixue, Wang, Ke, Li, Jikun, Nellutla, Saritha, Smirnova, Tatyana I, Oldfield, Eric

“…IspG is a 4Fe–4S protein that carries out an essential reduction step in isoprenoid biosynthesis. Using electron–nuclear double resonance (ENDOR) and hyperfine…”
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A TriAdj-Adjuvanted Chlamydia trachomatis CPAF Protein Vaccine Is Highly Immunogenic in Pigs by Proctor, Jessica, Stadler, Maria, Cortes, Lizette M, Brodsky, David, Poisson, Lydia, Gerdts, Volker, Smirnov, Alex I, Smirnova, Tatyana I, Barua, Subarna, Leahy, Darren, Beagley, Kenneth W, Harris, Jonathan M, Darville, Toni, Käser, Tobias

“…( ) infections are the most common sexually transmitted infection (STI). Despite effective antibiotics for , undetected infections or delayed treatment can…”
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