Search Results - "Slinger, Betty L."
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Recognizing RNA structural motifs in HT-SELEX data for ribosomal protein S15
Published in BMC bioinformatics (06-06-2017)“…Proteins recognize many different aspects of RNA ranging from single stranded regions to discrete secondary or tertiary structures. High-throughput sequencing…”
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Journal Article -
2
Complete RNA inverse folding: computational design of functional hammerhead ribozymes
Published in Nucleic acids research (13-10-2014)“…Nanotechnology and synthetic biology currently constitute one of the most innovative, interdisciplinary fields of research, poised to radically transform…”
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Journal Article -
3
Co-evolution of Bacterial Ribosomal Protein S15 with Diverse mRNA Regulatory Structures
Published in PLoS genetics (01-12-2015)“…RNA-protein interactions are critical in many biological processes, yet how such interactions affect the evolution of both partners is still unknown. RNA and…”
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Journal Article -
4
RNA regulators responding to ribosomal protein S15 are frequent in sequence space
Published in Nucleic acids research (02-11-2016)“…There are several natural examples of distinct RNA structures that interact with the same ligand to regulate the expression of homologous genes in different…”
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Journal Article -
5
Autoinducer-fluorophore conjugates enable FRET in LuxR proteins in vitro and in cells
Published in Nature chemical biology (01-10-2022)“…Cell-to-cell signaling, or quorum sensing (QS), in many Gram-negative bacteria is governed by small molecule signals ( N -acyl- l -homoserine lactones, AHLs)…”
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Potent modulation of the CepR quorum sensing receptor and virulence in a Burkholderia cepacia complex member using non-native lactone ligands
Published in Scientific reports (17-09-2019)“…The Burkholderia cepacia complex (Bcc) is a family of closely related bacterial pathogens that are the causative agent of deadly human infections. Virulence in…”
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Journal Article -
7
Discovery and validation of novel and distinct RNA regulators for ribosomal protein S15 in diverse bacterial phyla
Published in BMC genomics (07-08-2014)“…Autogenous cis-regulators of ribosomal protein synthesis play a critical role in maintaining the stoichiometry of ribosome components. Structured portions…”
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Journal Article -
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Co-evolution of Bacterial Ribosomal Protein S15 with Diverse mRNA Regulatory Structures: e1005720
Published in PLoS genetics (01-12-2015)“…RNA-protein interactions are critical in many biological processes, yet how such interactions affect the evolution of both partners is still unknown. RNA and…”
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Journal Article -
9
Insights into the co-evolution of ribosomal protein S15 with its regulatory RNAs
Published 01-01-2016“…Ribosomes play a vital role in all cellular life translating the genetic code into functional proteins. This pivotal function is derived from its structure…”
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Dissertation -
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Complete RNA inverse folding: computational design of functional hammerhead ribozymes
Published 09-08-2014“…Nucl. Acids Res. (2014) 42 (18): 11752-11762 Nanotechnology and synthetic biology currently constitute one of the most innovative, interdisciplinary fields of…”
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Journal Article