Microbiota associated with tubes of Escarpia sp. from cold seeps in the southwestern Atlantic Ocean constitutes a community distinct from that of surrounding marine sediment and water

As the depth increases and the light fades in oceanic cold seeps, a variety of chemosynthetic-based benthic communities arise. Previous assessments reported polychaete annelids belonging to the family Siboglinidae as part of the fauna at cold seeps, with the ‘Vestimentifera’ clade containing special...

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Published in:	Antonie van Leeuwenhoek Vol. 111; no. 4; pp. 533 - 550
Main Authors:	Medina-Silva, Renata, Oliveira, Rafael R., Trindade, Fernanda J., Borges, Luiz G. A., Lopes Simão, Taiz L., Augustin, Adolpho H., Valdez, Fernanda P., Constant, Marcelo J., Simundi, Carolina L., Eizirik, Eduardo, Groposo, Claudia, Miller, Dennis J., da Silva, Priscila Reis, Viana, Adriano R., Ketzer, João M. M., Giongo, Adriana
Format:	Journal Article
Language:	English
Published:	Cham Springer International Publishing 01-04-2018 Springer Nature B.V
Subjects:	Akvatisk ekologi Animals Aquatic Ecology Atlantic Ocean Bacteria - classification Benthic communities Biodiversity Biomedical and Life Sciences Chemoautotrophic Growth Chitin Communities DNA Barcoding, Taxonomic Ecosystem Endosymbionts Escarpia Geologic Sediments - microbiology Life Sciences Marine sediments Medical Microbiology Metagenome - genetics Microbiology Microbiota Microbiota - physiology Microorganisms Nutrition Original Paper Planctomycetales Plant Sciences Polychaeta - microbiology Polychaeta - ultrastructure RNA, Ribosomal, 16S - genetics rRNA 16S Seawater - microbiology Seepage Soil Science & Conservation Tubes Water depth United States > US Atlantic Ocean Tube worms Deep-sea Chemosynthetic community Pirellulaceae
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Summary:	As the depth increases and the light fades in oceanic cold seeps, a variety of chemosynthetic-based benthic communities arise. Previous assessments reported polychaete annelids belonging to the family Siboglinidae as part of the fauna at cold seeps, with the ‘Vestimentifera’ clade containing specialists that depend on microbial chemosynthetic endosymbionts for nutrition. Little information exists concerning the microbiota of the external portion of the vestimentiferan trunk wall. We employed 16S rDNA-based metabarcoding to describe the external microbiota of the chitin tubes from the vestimentiferan Escarpia collected from a chemosynthetic community in a cold seep area at the southwestern Atlantic Ocean. The most abundant operational taxonomic unit (OTU) belonged to the family Pirellulaceae (phylum Planctomycetes), and the second most abundant OTU belonged to the order Methylococcales (phylum Proteobacteria), composing an average of 21.1 and 15.4% of the total reads on tubes, respectively. These frequencies contrasted with those from the surrounding environment (sediment and water), where they represent no more than 0.1% of the total reads each. Moreover, some taxa with lower abundances were detected only in Escarpia tube walls. These data constitute on the first report of an epibiont microbial community found in close association with external surface of a cold-seep metazoan, Escarpia sp., from a chemosynthetic community in the southwestern Atlantic Ocean.
Bibliography:	ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23
ISSN:	0003-6072 1572-9699 1572-9699
DOI:	10.1007/s10482-017-0975-7