Search Results - "Simone Conti"

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  1. 1

    Accurate and Efficient Calculation of the Desorption Energy of Small Molecules from Graphene by Conti, Simone, Cecchini, Marco

    Published in Journal of physical chemistry. C (29-01-2015)
    “…Understanding the energetics of molecular adsorption at nanostructured carbon materials opens up to outstanding applications in the postgraphene era. The…”
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  2. 2

    Estimation of the breadth of CD4bs targeting HIV antibodies by molecular modeling and machine learning by Conti, Simone, Karplus, Martin

    Published in PLoS computational biology (10-04-2019)
    “…HIV is a highly mutable virus for which all attempts to develop a vaccine have been unsuccessful. Nevertheless, few long-infected patients develop antibodies,…”
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  3. 3

    MIRAGAIA TAIL BIOMECHANICS AND DEFENCES. EVALUATION OF THE TAIL MOBILITY AND RESISTANCE TO LOADINGS AND COLLISIONS by LATEGANO, FRANCESCO, CONTI, SIMONE, LOZAR, FRANCESCA

    “…Thyreophora is a taxon of dinosaurs composed of Stegosauria and Ankylosauria, whose members have been known to utilise their tails as powerful defensive…”
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  4. 4

    Multiscale affinity maturation simulations to elicit broadly neutralizing antibodies against HIV by Conti, Simone, Ovchinnikov, Victor, Faris, Jonathan G, Chakraborty, Arup K, Karplus, Martin, Sprenger, Kayla G

    Published in PLoS computational biology (20-04-2022)
    “…The design of vaccines against highly mutable pathogens, such as HIV and influenza, requires a detailed understanding of how the adaptive immune system…”
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  5. 5

    Multibody analysis and soft tissue strength refute supersonic dinosaur tail by Conti, Simone, Tschopp, Emanuel, Mateus, Octávio, Zanoni, Andrea, Masarati, Pierangelo, Sala, Giuseppe

    Published in Scientific reports (08-12-2022)
    “…Sauropod dinosaurs are well known for their massive sizes and long necks and tails. Among sauropods, flagellicaudatan dinosaurs are characterized by extreme…”
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  7. 7

    Surface-Induced Selection During In Situ Photoswitching at the Solid/Liquid Interface by Bonacchi, Sara, El Garah, Mohamed, Ciesielski, Artur, Herder, Martin, Conti, Simone, Cecchini, Marco, Hecht, Stefan, Samorì, Paolo

    Published in Angewandte Chemie International Edition (13-04-2015)
    “…Here we report for the first time a submolecularly resolved scanning tunneling microscopy (STM) study at the solid/liquid interface of the in situ reversible…”
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  8. 8

    Smart Biomechanical Adaptation Revealed by the Structure of Ostrich Limb Bones by Conti, Simone, Sala, Giuseppe, Mateus, Octavio

    Published in Biomimetics (Basel, Switzerland) (28-02-2023)
    “…Ostriches are known to be the fastest bipedal animal alive; to accomplish such an achievement, their anatomy evolved to sustain the stresses imposed by running…”
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  9. 9

    Wordom update 2: A user-friendly program for the analysis of molecular structures and conformational ensembles by Felline, Angelo, Conti, Simone, Seeber, Michele, Cecchini, Marco, Fanelli, Francesca

    “…We present the second update of Wordom, a user-friendly and efficient program for manipulation and analysis of conformational ensembles from molecular…”
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  10. 10

    On the Rapid Calculation of Binding Affinities for Antigen and Antibody Design and Affinity Maturation Simulations by Conti, Simone, Lau, Edmond Y, Ovchinnikov, Victor

    Published in Antibodies (Basel) (03-08-2022)
    “…The accurate and efficient calculation of protein-protein binding affinities is an essential component in antibody and antigen design and optimization, and in…”
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  11. 11

    Investigação das relações de autoritarismo e poder nos textos de Caio Fernando Abreu e João Simões Lopes Neto by Simone Conti de Oliveira

    Published in Literatura e autoritarismo (01-03-2022)
    “…O presente trabalho tem por objetivo analisar o preconceito - enquanto elemento presente na constituição e formação de sociedades patriarcais - a partir da…”
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  12. 12

    ppdx: Automated modeling of protein–protein interaction descriptors for use with machine learning by Conti, Simone, Ovchinnikov, Victor, Karplus, Martin

    Published in Journal of computational chemistry (30-09-2022)
    “…This paper describes ppdx, a python workflow tool that combines protein sequence alignment, homology modeling, and structural refinement, to compute a broad…”
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  13. 13

    Surface-Induced Selection During In Situ Photoswitching at the Solid/Liquid Interface by Bonacchi, Sara, El Garah, Mohamed, Ciesielski, Artur, Herder, Martin, Conti, Simone, Cecchini, Marco, Hecht, Stefan, Samorì, Paolo

    Published in Angewandte Chemie (13-04-2015)
    “…Here we report for the first time a submolecularly resolved scanning tunneling microscopy (STM) study at the solid/liquid interface of the in situ reversible…”
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    Journal Article
  14. 14

    Enterobacteriaceae and pseudomonadaceae on the dorsum of the human tongue by Conti, Simone, dos Santos, Silvana Soléo Ferreira, Koga-Ito, Cristiane Yumi, Jorge, Antonio Olavo Cardoso

    Published in Journal of applied oral science (01-10-2009)
    “…The aim of this study was to correlate the presence of Enterobacteriaceae, Pseudomonadaceae, Moraxellaceae and Xanthomonadaceae on the posterior dorsum of the…”
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  15. 15

    Persulfurated Benzene‐Cored Asterisks with π‐Extended ThioNaphthyl Arms: Synthesis, Structural, Photophysical and Covalent Dynamic Properties by Gahlot, Sapna, Gradone, Alessandro, Roy, Myriam, Giorgi, Michel, Conti, Simone, Ceroni, Paola, Villa, Marco, Gingras, Marc

    Published in Chemistry : a European journal (16-08-2022)
    “…The synthesis of regioisomeric asterisks (5) and (6) incorporating a benzene core with six 1‐naphthylthio or six 2‐naphthylthio arms are reported in search for…”
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  16. 16

    Ou sou ninguém ou sou uma nação: reflexões sobre identidade e alteridade by Simone Conti de Oliveira

    Published in Literatura e autoritarismo (01-12-2011)
    “…Este artigo tem por objetivo propor uma análise das obras A fantástica vida breve de Oscar Wao, de Junot Diaz, e O álbum negro, de Hanif Kureishi, a qual…”
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  17. 17

    Multiscale affinity maturation simulations to elicit broadly neutralizing antibodies against HIV by Simone Conti, Victor Ovchinnikov, Jonathan G Faris, Arup K Chakraborty, Martin Karplus, Kayla G Sprenger

    Published in PLoS computational biology (01-04-2022)
    “…The design of vaccines against highly mutable pathogens, such as HIV and influenza, requires a detailed understanding of how the adaptive immune system…”
    Get full text
    Journal Article
  18. 18

    Design of immunogens to elicit broadly neutralizing antibodies against HIV targeting the CD4 binding site by Conti, Simone, Kaczorowski, Kevin J., Song, Ge, Porter, Katelyn, Andrabi, Raiees, Burton, Dennis R., Chakraborty, Arup K., Karplus, Martin

    “…A vaccine which is effective against the HIV virus is considered to be the best solution to the ongoing global HIV/AIDS epidemic. In the past thirty years,…”
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  19. 19

    Microsecond Molecular Dynamics Simulations of Proteins Using a Quasi-Equilibrium Solvation Shell Model by Ovchinnikov, Victor, Conti, Simone, Lau, Edmond Y, Lightstone, Felice C, Karplus, Martin

    Published in Journal of chemical theory and computation (10-03-2020)
    “…We describe the development and implementation of a quasi-equilibrium hydration shell model of biomolecular solvation with adaptive boundaries. Applying the…”
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  20. 20

    Strategy for the development of a new stick formula without microplastics by Frigerio, Laura, Padovano, Luigi, Conti, Simone, Malacarne, Miryam Chiara, Caruso, Enrico

    Published in Sustainable chemistry and pharmacy (01-02-2024)
    “…Plastic is a synthetic, malleable, and durable material that has been used for various applications since its invention in the late 19th century. During its…”
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