Search Results - "Shiyong Lu"

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  1. 1

    A Reference Architecture for Scientific Workflow Management Systems and the VIEW SOA Solution by Cui Lin, Shiyong Lu, Xubo Fei, Chebotko, A., Darshan Pai, Zhaoqiang Lai, Fotouhi, F., Jing Hua

    Published in IEEE transactions on services computing (01-01-2009)
    “…Scientific workflows have recently emerged as a new paradigm for scientists to formalize and structure complex and distributed scientific processes to enable…”
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    Journal Article
  2. 2

    Confucius: A Tool Supporting Collaborative Scientific Workflow Composition by Jia Zhang, Kuc, Daniel, Shiyong Lu

    Published in IEEE transactions on services computing (01-01-2014)
    “…Modern scientific data management and analysis usually rely on multiple scientists with diverse expertise. In recent years, such a collaborative effort is…”
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    Journal Article
  3. 3

    Data Replication in Data Intensive Scientific Applications with Performance Guarantee by Nukarapu, D. T., Bin Tang, Liqiang Wang, Shiyong Lu

    “…Data replication has been well adopted in data intensive scientific applications to reduce data file transfer time and bandwidth consumption. However, the…”
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    Journal Article
  4. 4

    Characterizing microbiota and metabolomics analysis to identify candidate biomarkers in lung cancer by Liu, Bo, Li, Yige, Suo, Lijun, Zhang, Wei, Cao, Hongyun, Wang, Ruicai, Luan, Jiahui, Yu, Xiaofeng, Dong, Liang, Wang, Wenjing, Xu, Shiyang, Lu, Shiyong, Shi, Mei

    Published in Frontiers in oncology (15-11-2022)
    “…Lung cancer is the leading malignant disease and cause of cancer-related death worldwide. Most patients with lung cancer had insignificant early symptoms so…”
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    Journal Article
  5. 5

    Typetheoretic Approach to the Shimming Problem in Scientific Workflows by Kashlev, Andrey, Shiyong Lu

    Published in IEEE transactions on services computing (01-09-2015)
    “…When composing Web services into scientific workflows, users often face the so-called shimming problem when connecting two related but incompatible components…”
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    Journal Article
  6. 6

    A Dataflow-Based Scientific Workflow Composition Framework by Fei, Xubo, Lu, Shiyong

    Published in IEEE transactions on services computing (01-01-2012)
    “…Scientific workflow has recently become an enabling technology to automate and speed up the scientific discovery process. Although several scientific workflow…”
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    Journal Article
  7. 7

    Satisfiability Analysis of Workflows with Control-Flow Patterns and Authorization Constraints by Ping Yang, Xing Xie, Ray, Indrakshi, Shiyong Lu

    Published in IEEE transactions on services computing (01-04-2014)
    “…Workflow security has become increasingly important and challenging in today's open service world. While much research has been conducted on various security…”
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    Journal Article
  8. 8

    High-Molecular-Weight Polyethyleneimine Conjuncted Pluronic for Gene Transfer Agents by Liang, Wenqing, Gong, Haiyang, Yin, Dongfeng, Lu, Shiyong, Fu, Qiang

    “…In order to enhance the gene delivery efficiency and decrease cytotoxicity of polyplexes, copolymers consisting of branched polyethyleneimine (PEI) 25 kDa…”
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    Journal Article
  9. 9

    Incremental genetic K-means algorithm and its application in gene expression data analysis by Lu, Yi, Lu, Shiyong, Fotouhi, Farshad, Deng, Youping, Brown, Susan J

    Published in BMC bioinformatics (28-10-2004)
    “…In recent years, clustering algorithms have been effectively applied in molecular biology for gene expression data analysis. With the help of clustering…”
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    Journal Article
  10. 10

    A Big Data Modeling Methodology for Apache Cassandra by Chebotko, Artem, Kashlev, Andrey, Shiyong Lu

    “…Apache Cassandra is a leading distributed database of choice when it comes to big data management with zero downtime, linear scalability, and seamless multiple…”
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    Conference Proceeding
  11. 11

    Cloud Computing and Grid Computing 360-Degree Compared by Foster, I., Yong Zhao, Raicu, I., Lu, S.

    Published in 2008 Grid Computing Environments Workshop (01-11-2008)
    “…Cloud computing has become another buzzword after Web 2.0. However, there are dozens of different definitions for cloud computing and there seems to be no…”
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    Conference Proceeding
  12. 12

    Automatic workflow verification and generation by Lu, Shiyong, Bernstein, Arthur, Lewis, Philip

    Published in Theoretical computer science (14-03-2006)
    “…Correctness is an important aspect of workflow management systems. However, most of the workflow literature focuses only on the modeling aspects and assumes…”
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    Journal Article
  13. 13

    Secure abstraction views for scientific workflow provenance querying by Chebotko, A, Shiyong Lu, Seunghan Chang, Fotouhi, F, Ping Yang

    Published in IEEE transactions on services computing (01-10-2010)
    “…Provenance has become increasingly important in scientific workflows and services computing to capture the derivation history of a data product, including the…”
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    Journal Article
  14. 14

    Coclustering for Cross-Subject Fiber Tract Analysis Through Diffusion Tensor Imaging by Cui Lin, Darshan Pai, Shiyong Lu, Muzik, O., Jing Hua

    “…One of the fundamental goals of computational neuroscience is the study of anatomical features that reflect the functional organization of the brain. The study…”
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    Journal Article
  15. 15

    FM-test: a fuzzy-set-theory-based approach to differential gene expression data analysis by Liang, Lily R, Lu, Shiyong, Wang, Xuena, Lu, Yi, Mandal, Vinay, Patacsil, Dorrelyn, Kumar, Deepak

    Published in BMC bioinformatics (12-12-2006)
    “…Microarray techniques have revolutionized genomic research by making it possible to monitor the expression of thousands of genes in parallel. As the amount of…”
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    Journal Article
  16. 16

    A System Architecture for Running Big Data Workflows in the Cloud by Kashlev, Andrey, Shiyong Lu

    “…Scientific workflows have become an important paradigm for domain scientists to formalize and structure complex data-intensive scientific processes. The…”
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    Conference Proceeding
  17. 17

    Scheduling Scientific Workflows Elastically for Cloud Computing by Cui Lin, Shiyong Lu

    “…Most existing workflow scheduling algorithms only consider a computing environment in which the number of compute resources is bounded. Compute resources in…”
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    Conference Proceeding
  18. 18

    Multimodality data integration in epilepsy by Muzik, Otto, Chugani, Diane C, Zou, Guangyu, Hua, Jing, Lu, Yi, Lu, Shiyong, Asano, Eishi, Chugani, Harry T

    “…An important goal of software development in the medical field is the design of methods which are able to integrate information obtained from various imaging…”
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    Journal Article
  19. 19

    BDAP: A Big Data Placement Strategy for Cloud-Based Scientific Workflows by Ebrahimi, Mahdi, Mohan, Aravind, Kashlev, Andrey, Shiyong Lu

    “…In this new era of Big Data, there is a growing need to enable scientific workflows to perform computations at a scale far exceeding a single workstation's…”
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    Conference Proceeding
  20. 20

    A NoSQL Data Model for Scalable Big Data Workflow Execution by Mohan, Aravind, Ebrahimi, Mahdi, Shiyong Lu, Kotov, Alexander

    “…While big data workflows haven been proposed recently as the next-generation data-centric workflow paradigm to process and analyze data of ever increasing in…”
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    Conference Proceeding