Search Results - "Shi, Jisen"
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RIdeogram : drawing SVG graphics to visualize and map genome-wide data on the idiograms
Published in PeerJ. Computer science (20-01-2020)“…Owing to the rapid advances in DNA sequencing technologies, whole genome from more and more species are becoming available at increasing pace. For whole-genome…”
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A trishear model with self-adaptive propagation-to-slip ratio
Published in Journal of structural geology (01-06-2022)“…Natural beds at different stratigraphic levels display different degrees of folding. Variable propagation-to-slip ratios in the trishear models are more…”
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Selection of reference genes for gene expression analysis in Liriodendron hybrids’ somatic embryogenesis and germinative tissues
Published in Scientific reports (02-03-2021)“…The differential expression of genes is crucial for plant somatic embryogenesis (SE), and the accurate quantification of gene expression levels relies on…”
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Transcriptome analysis and metabolic profiling reveal the key role of carotenoids in the petal coloration of Liriodendron tulipifera
Published in Horticulture research (01-05-2020)“…Liriodendron tulipifera , also known as tuliptree, is a popular ornamental horticultural plant with extraordinary tulip-shaped flowers characterized by an…”
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Danger-Associated Peptides Close Stomata by OST1-Independent Activation of Anion Channels in Guard Cells
Published in The Plant cell (01-05-2018)“…The plant elicitor peptides (Peps), a family of damage/danger-associated molecular patterns (DAMPs), are perceived by two receptors, PEPR1 and PEPR2, and…”
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A vacuolar phosphate transporter essential for phosphate homeostasis in Arabidopsis
Published in Proceedings of the National Academy of Sciences - PNAS (24-11-2015)“…Inorganic phosphate (Pi) is stored in the vacuole, allowing plants to adapt to variable Pi availability in the soil. The transporters that mediate Pi…”
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Nitric oxide enhances desiccation tolerance of recalcitrant Antiaris toxicaria seeds via protein S-nitrosylation and carbonylation
Published in PloS one (02-06-2011)“…The viability of recalcitrant seeds is lost following stress from either drying or freezing. Reactive oxygen species (ROS) resulting from uncontrolled…”
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Genome-wide identification of the Liriodendron chinense WRKY gene family and its diverse roles in response to multiple abiotic stress
Published in BMC plant biology (10-01-2022)“…Liriodendron chinense (Lchi) is a tree species within the Magnoliaceae family and is considered a basal angiosperm. The too low or high temperature or soil…”
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Vacuolar Phosphate Transporters Contribute to Systemic Phosphate Homeostasis Vital for Reproductive Development in Arabidopsis
Published in Plant physiology (Bethesda) (01-02-2019)“…Vacuolar storage of phosphate (Pi) is essential for Pi homeostasis in plants. Recent studies have identified a family of vacuolar Pi transporters, VPTs…”
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Genome-wide identification of the NAC gene family and its functional analysis in Liriodendron
Published in BMC plant biology (08-09-2023)“…Abstract As one of the largest plant specific transcription factor families, NAC family members play an important role in plant growth, development and stress…”
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Overexpression of Liriodenron WOX5 in Arabidopsis Leads to Ectopic Flower Formation and Altered Root Morphology
Published in International journal of molecular sciences (04-01-2023)“…Roots are essential for plant growth, and studies on root-related genes, exemplified by ( ), have mainly concentrated on model organisms with less emphasis on…”
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Gibberellin Oxidase Gene Family in L. chinense: Genome-Wide Identification and Gene Expression Analysis
Published in International journal of molecular sciences (01-07-2021)“…GAox is a key enzyme for the transformation of gibberellins, and belongs to the 2-ketoglutarate dependent dioxygenase gene family (2ODD). However, a systematic…”
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γ-Aminobutyric acid a novel candidate for rapid induction in somatic embryogenesis of Liriodendron hybrid
Published in Plant growth regulation (01-03-2022)“…The γ-aminobutyric acid is a non-protein amino acid with a so far unestablished role in Liriodendron hybrid somatic embryogenesis. In this study, we aimed to…”
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Liriodendron genome sheds light on angiosperm phylogeny and species–pair differentiation
Published in Nature plants (01-01-2019)“…The genus Liriodendron belongs to the family Magnoliaceae, which resides within the magnoliids, an early diverging lineage of the Mesangiospermae. However, the…”
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Evolution of the WRKY Family in Angiosperms and Functional Diversity under Environmental Stress
Published in International journal of molecular sciences (21-03-2024)“…The transcription factor is an essential factor for regulating the responses of plants to external stimuli. The WRKY protein is a superfamily of plant…”
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Genomic survey and expression analysis of LcARFs reveal multiple functions to somatic embryogenesis in Liriodendron
Published in BMC plant biology (07-02-2024)“…Auxin response factors (ARFs) are critical transcription factors that mediate the auxin signaling pathway and are essential for regulating plant growth…”
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Comparative Analysis of the Chloroplast Genomic Information of Cunninghamia lanceolata (Lamb.) Hook with Sibling Species from the Genera Cryptomeria D. Don, Taiwania Hayata, and Calocedrus Kurz
Published in International journal of molecular sciences (01-07-2016)“…Chinese fir (Cunninghamia lanceolata (Lamb.) Hook) is an important coniferous tree species for timber production, which accounts for ~40% of log supply from…”
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CIPK11: a calcineurin B-like protein-interacting protein kinase from Nitraria tangutorum, confers tolerance to salt and drought in Arabidopsis
Published in BMC plant biology (01-03-2021)“…The CIPKs are a group of plant-specific Ser/Thr protein kinases acting in response to calcium signaling, which plays an important role in the physiological and…”
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Genome-Wide Analysis of the Liriodendron chinense Hsf Gene Family under Abiotic Stress and Characterization of the LcHsfA2a Gene
Published in International journal of molecular sciences (27-02-2024)“…Heat shock factors (Hsfs) play a crucial role in plant defense processes. However, the distribution and functional characteristics of Hsf genes in the relict…”
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Phytosulfokine contributes to suspension culture of Cunninghamia lanceolata through its impact on redox homeostasis
Published in BMC plant biology (09-10-2023)“…Abstract Background Suspension culture is widely used in the establishment of efficient plant regeneration systems, as well as in the mass production of plant…”
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