Search Results - "Shi, Hualin"

Universal scaling relation and criticality in metabolism and growth of Escherichia coli by Guan, Shaohua, Zhang, Zhichao, Zhang, Zihan, Shi, Hualin

“…The metabolic network plays a crucial role in regulating bacterial metabolism and growth, but it is subject to inherent molecular stochasticity. Previous…”
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Bacterial strategies in prolonged stationary phase: Tradeoff between cell growth, maintenance, and recycling by Zhang, Qing, Chen, Yining, Shi, Hualin

“…In continuous starvation, bacteria will enter an extended stationary phase after the death phase. Growth-advantaged genetic mutations gradually emerge in the…”
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Quantitative Connection between Cell Size and Growth Rate by Phospholipid Metabolism by Zhang, Zhichao, Zhang, Qing, Guan, Shaohua, Shi, Hualin

“…The processes involved in cell growth are extremely complicated even for a single cell organism such as , while the relationship between growth rate and cell…”
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A Decrease in Transcription Capacity Limits Growth Rate upon Translation Inhibition by Zhang, Qing, Brambilla, Elisa, Li, Rui, Shi, Hualin, Cosentino Lagomarsino, Marco, Sclavi, Bianca

“…Exposure of bacteria to sublethal concentrations of antibiotics can lead to bacterial adaptation and survival at higher doses of inhibitors, which in turn can…”
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n-3 PUFA poor seafood consumption is associated with higher risk of gout, whereas n-3 PUFA rich seafood is not: NHANES 2007-2016 by Zeng, Guixing, You, Dongxin, Ye, Lingyan, Wu, Yuchi, Shi, Hualin, Lin, Jiarong, Jiang, Ziyan, Wei, Junping

“…Gout, the most prevalent inflammatory arthritis, has undesirable effects on the quality of life. Omega-3 polyunsaturated fatty acids (n-3 PUFA) has a strong…”
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Quantifying the sequence-function relation in gene silencing by bacterial small RNAs by Hao, Yue, Zhang, Zhongge J, Erickson, David W, Huang, Min, Huang, Yingwu, Li, Junbai, Hwa, Terence, Shi, Hualin

“…Sequence-function relations for small RNA (sRNA)-mediated gene silencing were quantified for the sRNA RyhB and some of its mRNA targets in Escherichia coli…”
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Cell Size Is Coordinated with Cell Cycle by Regulating Initiator Protein DnaA in E. coli by Zhang, Qing, Zhang, Zhichao, Shi, Hualin

“…Sixty years ago, bacterial cell size was found to be an exponential function of growth rate. Fifty years ago, a more general relationship was proposed, in…”
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Effects of cooperation between translating ribosome and RNA polymerase on termination efficiency of the Rho-independent terminator by Li, Rui, Zhang, Qing, Li, Junbai, Shi, Hualin

“…An experimental system was designed to measure in vivo termination efficiency (TE) of the Rho-independent terminator and position-function relations were…”
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Coupling chromosomal replication to cell growth by the initiator protein DnaA in Escherichia coli by Zhang, Qing, Shi, Hualin

“…The initiation of chromosomal replication is strictly controlled during the cell cycle. Its frequency needs to be well-matched to the proliferation rate. In…”
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Optimal Allocation of Bacterial Protein Resources under Nonlethal Protein Maturation Stress by Zhang, Qing, Li, Rui, Li, Junbai, Shi, Hualin

“…Under different environmental stresses, bacteria optimize the allocation of cellular resources through a variety of mechanisms. Recently, researchers have used…”
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The energy pump and the origin of the non-equilibrium flux of the dynamical systems and the networks by Xu, Liufang, Shi, Hualin, Feng, Haidong, Wang, Jin

“…The global stability of dynamical systems and networks is still challenging to study. We developed a landscape and flux framework to explore the global…”
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Strategy of tuning gene expression ratio in prokaryotic cell from perspective of noise and correlation by Li, Rui, Xu, Liufang, Shi, Hualin

“…Genes are organized into operons in procaryote, and these genes in one operon generally have related functions. However, genes in the same operon are usually…”
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Memory Effect on the Survival of Deinococcus radiodurans after Exposure in Near Space by Chen, Yining, Zhang, Qing, Wang, Deyu, Shu, Yao-Gen, Shi, Hualin

“…Near space (20 to 100 km in altitude) is an extreme environment with high radiation and extreme cold, making it difficult for organisms to survive. However, many…”
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Differences in farmland abandonment behavior among farming households and influencing factors from the perspective of family life cycle: A case study of the hilly and mountainous areas in Jiangxi Province by XIE, Hualin, SHI, Jiaying, LENG, Kecheng

“…[Objective] The purpose of this study was to reveal the mechanism of impact of family life cycle on farming households’ farmland abandonment behavior, clarify…”
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Trade-offs between effectiveness and cost in bifunctional enzyme circuit with concentration robustness by Guan, Shaohua, Xu, Liufang, Zhang, Qing, Shi, Hualin

“…A fundamental trade-off in biological systems is whether they consume resources to perform biological functions or save resources. Bacteria need to reliably…”
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Theoretical Analysis of Catalytic-sRNA-Mediated Gene Silencing by Hao, Yue, Xu, Liufang, Shi, Hualin

“…Small regulatory RNA (sRNA) that acts by an antisense mechanism is critical for gene regulation at the posttranscriptional level. Recently, an Hfq-dependent…”
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Quantum phase separation dynamics of two component Bose–Einstein condensates by Chui, S.T., Chui, Hong, Shi, Hualin, Liu, W.M., Zheng, Wei-Mou

“…We investigate the nonequilibrium spatial phase segregation process of a mixture of alkali Bose–Einstein condensates. A rich variety of behavior is observed as…”
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K-means clustering based on self-adaptive weight by Yuzhu Zhang, Hualin Shi, Damin Zhang

“…Traditional K-means algorithm is sensitive to the initial cluster centers. It is easily influenced by the outlier and the uneven distribution of the samples to…”
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A Decrease in Transcription Capacity Limits Growth Rate upon Translation Inhibition by Zhang, Qing, Brambilla, Elisa, Li, Rui, Shi, Hualin, Lagomarsino, Marco Cosentino, Sclavi, Bianca

“…In bacterial cells, inhibition of ribosomes by sublethal concentrations of antibiotics leads to a decrease in the growth rate despite an increase in ribosome…”
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Universal scaling relation and criticality in metabolism and growth of Escherichia coli by Guan, Shaohua, Zhang, Zhichao, Zhang, Zihan, Shi, Hualin

“…Phys. Rev. Research 6, 013035 (2024) The metabolic network plays a crucial role in regulating bacterial metabolism and growth, but it is subject to inherent…”
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