Search Results - "Shi, Aiai"

CancerSEA: a cancer single-cell state atlas by Yuan, Huating, Yan, Min, Zhang, Guanxiong, Liu, Wei, Deng, Chunyu, Liao, Gaoming, Xu, Liwen, Luo, Tao, Yan, Haoteng, Long, Zhilin, Shi, Aiai, Zhao, Tingting, Xiao, Yun, Li, Xia

“…Abstract High functional heterogeneity of cancer cells poses a major challenge for cancer research. Single-cell sequencing technology provides an unprecedented…”
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CellMarker: a manually curated resource of cell markers in human and mouse by Zhang, Xinxin, Lan, Yujia, Xu, Jinyuan, Quan, Fei, Zhao, Erjie, Deng, Chunyu, Luo, Tao, Xu, Liwen, Liao, Gaoming, Yan, Min, Ping, Yanyan, Li, Feng, Shi, Aiai, Bai, Jing, Zhao, Tingting, Li, Xia, Xiao, Yun

“…Abstract One of the most fundamental questions in biology is what types of cells form different tissues and organs in a functionally coordinated fashion…”
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A comprehensive atlas of epigenetic regulators reveals tissue-specific epigenetic regulation patterns by Wang, Jilu, Shi, Aiai, Lyu, Jie

“…Epigenetic machinery contributes to gene regulation in eukaryotic species. However, the machinery including more than 600 epigenetic regulator (ER) genes…”
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EPRIM: An approach of identifying cancer immune-related epigenetic regulators by Shi, Aiai, Lin, Chaohuan, Wang, Jilu, Chen, Ying’ao, Zhong, Jinjin, Lyu, Jie

“…Epigenetic regulation contributes to the dysregulation of gene expression involved in cancer biology. Nevertheless, the roles of epigenetic regulators (ERs) in…”
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Dissecting cellular states of infiltrating microenvironment cells in melanoma by integrating single-cell and bulk transcriptome analysis by Shi, Aiai, Yan, Min, Pang, Bo, Pang, Lin, Wang, Yihan, Lan, Yujia, Zhang, Xinxin, Xu, Jinyuan, Ping, Yanyan, Hu, Jing

“…Cellular states of different immune cells can affect the activity of the whole immune microenvironment. Here, leveraging reference profiles of microenvironment…”
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Decoding functional impact of epigenetic regulator mutations on ligand–receptor interaction perturbations for evaluation of cancer immunotherapy by Shi, Aiai, Lin, Chaohuan, Lyu, Jie

“…Cellular crosstalk mediated by ligand–receptor interactions largely complicates the tumour ecosystem, resulting in heterogeneous tumour microenvironments that…”
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LnChrom: a resource of experimentally validated lncRNA-chromatin interactions in human and mouse by Yu, Fulong, Zhang, Guanxiong, Shi, Aiai, Hu, Jing, Li, Feng, Zhang, Xinxin, Zhang, Yan, Huang, Jian, Xiao, Yun, Li, Xia, Cheng, Shujun

“…Long non-coding RNAs (lncRNAs) constitute an important layer of chromatin regulation that contributes to various biological processes and diseases. By…”
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Capturing functional long non-coding RNAs through integrating large-scale causal relations from gene perturbation experiments by Xu, Jinyuan, Shi, Aiai, Long, Zhilin, Xu, Liwen, Liao, Gaoming, Deng, Chunyu, Yan, Min, Xie, Aiming, Luo, Tao, Huang, Jian, Xiao, Yun, Li, Xia

“…Characterizing functions of long noncoding RNAs (lncRNAs) remains a major challenge, mostly due to the lack of lncRNA-involved regulatory relationships. A wide…”
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Optimizing prognosis-related key miRNA-target interactions responsible for cancer metastasis by Zhao, Hongying, Yuan, Huating, Hu, Jing, Xu, Chaohan, Liao, Gaoming, Yin, Wenkang, Xu, Liwen, Wang, Li, Zhang, Xinxin, Shi, Aiai, Li, Jing, Xiao, Yun

“…Increasing evidence suggests that the abnormality of microRNAs (miRNAs) and their downstream targets is frequently implicated in the pathogenesis of human…”
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Capturing functional long non-coding RNAs through integrating large-scale causal relations from gene perturbation experimentsResearch in context by Jinyuan Xu, Aiai Shi, Zhilin Long, Liwen Xu, Gaoming Liao, Chunyu Deng, Min Yan, Aiming Xie, Tao Luo, Jian Huang, Yun Xiao, Xia Li

“…Characterizing functions of long noncoding RNAs (lncRNAs) remains a major challenge, mostly due to the lack of lncRNA-involved regulatory relationships. A wide…”
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