Search Results - "Shafi, K. Mohamed"

Computational analysis of potential candidate genes involved in the cold stress response of ten Rosaceae members by Shafi, K. Mohamed, Sowdhamini, Ramanathan

“…Abstract Background Plant species from Rosaceae family are economically important. One of the major environmental factors impacting those species is cold…”
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Transcriptional regulation of hormone signalling genes in black pepper in response to Phytophthora capsici by Mahadevan, Chidambareswaren, Shafi, K Mohamed, Nagarathnam, B, Sakuntala, Manjula, Sowdhamini, Ramanathan

“…Black pepper (Piper nigrum L.) is a non-model spice crop of significant agricultural and biological importance. The 'quick wilt' disease caused by the oomycete…”
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Development of candidate gene-based markers and map-based cloning of a dominant rust resistance gene in cultivated groundnut (Arachis hypogaea L.) by Mondal, Suvendu, Mohamed Shafi, K., Raizada, Avi, Song, Hui, Badigannavar, Anand M., Sowdhamini, Ramanathan

“…[Display omitted] •A dominant rust resistance gene VG 9514-Rgene was cloned in cultivated groundnut.•Candidate gene-based marker was developed for this rust…”
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Transcriptome profiling of two Moringa species and insights into their antihyperglycemic activity by Shafi, K Mohamed, Sajeevan, Radha Sivarajan, Kouser, Sania, Vishnuprasad, Chethala N, Sowdhamini, Ramanathan

“…Moringa concanensis Nimmo (MC), a plant that resembles Moringa oleifera Lam. (MO), has less scientific information but has traditionally been used as a…”
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Exploring the medicinally important secondary metabolites landscape through the lens of transcriptome data in fenugreek (Trigonella foenum graecum L.) by Naika, Mahantesha B. N., Sathyanarayanan, Nitish, Sajeevan, Radha Sivarajan, Bhattacharyya, Teerna, Ghosh, Pritha, Iyer, Meenakshi S., Jarjapu, Mahita, Joshi, Adwait G., Harini, K., Shafi, K. Mohamed, Kalmankar, Neha, Karpe, Snehal D., Mam, Bhavika, Pasha, Shaik Naseer, Sowdhamini, Ramanathan

“…Fenugreek ( Trigonella foenum-graecum L.) is a self-pollinated leguminous crop belonging to the Fabaceae family. It is a multipurpose crop used as herb, spice,…”
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An Approach to Function Annotation for Proteins of Unknown Function (PUFs) in the Transcriptome of Indian Mulberry by Dhanyalakshmi, K H, Naika, Mahantesha B N, Sajeevan, R S, Mathew, Oommen K, Shafi, K Mohamed, Sowdhamini, Ramanathan, N Nataraja, Karaba

“…The modern sequencing technologies are generating large volumes of information at the transcriptome and genome level. Translation of this information into a…”
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Dataset for the combined transcriptome assembly of M. oleifera and functional annotation by Shafi, K. Mohamed, Joshi, Adwait G., Meenakshi, Iyer, Pasha, Shaik Naseer, Harini, K., Mahita, Jarjapu, Sajeevan, Radha Sivarajan, Karpe, Snehal D., Ghosh, Pritha, Nitish, Sathyanarayanan, Gandhimathi, A., Mathew, Oommen K., Prasanna, Subramanian Hari, Malini, Manoharan, Mutt, Eshita, Naika, Mahantesha, Ravooru, Nithin, Rao, Rajas M., Shingate, Prashant N., Sukhwal, Anshul, Sunitha, Margaret S., Upadhyay, Atul K., Vinekar, Rithvik S., Sowdhamini, Ramanathan

“…In this paper, we present the data acquired during transcriptome analysis of the plant Moringa oleifera [1] from five different tissues (root, stem, leaf,…”
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A knowledge-driven protocol for prediction of proteins of interest with an emphasis on biosynthetic pathways by Joshi, Adwait G., Harini, K., Meenakshi, Iyer, Shafi, K. Mohamed, Pasha, Shaik Naseer, Mahita, Jarjapu, Sajeevan, Radha Sivarajan, Karpe, Snehal D., Ghosh, Pritha, Nitish, Sathyanarayanan, Gandhimathi, A., Mathew, Oommen K., Prasanna, Subramanian Hari, Malini, Manoharan, Mutt, Eshita, Naika, Mahantesha, Ravooru, Nithin, Rao, Rajas M., Shingate, Prashant N., Sukhwal, Anshul, Sunitha, Margaret S., Upadhyay, Atul K., Vinekar, Rithvik S., Sowdhamini, Ramanathan

“…This protocol describes a stepwise process to identify proteins of interest from a query proteome derived from NGS data. We implemented this protocol on…”
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Decoding systems biology of plant stress for sustainable agriculture development and optimized food production by Shameer, Khader, Naika, Mahantesha B.N., Shafi, K. Mohamed, Sowdhamini, Ramanathan

“…Plants are essential facilitators of human life on planet earth. Plants play a critical functional role in mediating the quality of air, availability of food…”
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Genome-wide association study reveals effect of nsSNPs on candidate genes in rice during iron deficiency by Panda, Siddharth, Anandan, Annamalai, Shafi, K. Mohamed, Naika, Mahantesha B. N., Sowdhamini, R., Vanishree, G., Sarkar, Sutapa, Travis, Anthony J., Norton, Gareth J., Price, Adam H.

“…Resource-poor areas with moisture deficit lands following aerobic and direct seeded rice (DSR) methods of cultivation face severe problems of iron deficiency…”
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The transcriptome enables the identification of candidate genes behind medicinal value of Drumstick tree (Moringa oleifera) by Pasha, Shaik Naseer, Shafi, K. Mohamed, Joshi, Adwait G., Meenakshi, Iyer, Harini, K., Mahita, Jarjapu, Sajeevan, Radha Sivarajan, Karpe, Snehal D., Ghosh, Pritha, Nitish, Sathyanarayanan, Gandhimathi, A., Mathew, Oommen K., Prasanna, Subramanian Hari, Malini, Manoharan, Mutt, Eshita, Naika, Mahantesha, Ravooru, Nithin, Rao, Rajas M., Shingate, Prashant N., Sukhwal, Anshul, Sunitha, Margaret S., Upadhyay, Atul K., Vinekar, Rithvik S., Sowdhamini, Ramanathan

“…Moringa oleifera is a plant well-known for its nutrition value, drought resistance and medicinal properties. cDNA libraries from five different tissues (leaf,…”
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