Synthesis of 5′-Thymidine-Conjugated Formylphenylboronic Acids as Potential Lysine Targeting Iminoboronate Reversible Covalent Enzyme Probes

The design of reversible-covalent molecules to selectively target the ε-amino functionality of lysine residues in enzymes or proteins is a highly desirable goal. Herein, we describe synthetic methodology used to prepare a series of 5′-thymidine-linked formylphenylboronic acids as probes to interroga...

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Bibliographic Details
Published in:Journal of organic chemistry Vol. 87; no. 21; pp. 13542 - 13555
Main Authors: Rangaswamy, Alana M. M., Beh, Michael H. R., Soleimani, Ebrahim, Sequeira, Steve, Cormier, Julie, Robertson, Katherine N., Jakeman, David L.
Format: Journal Article
Language:English
Published: United States American Chemical Society 04-11-2022
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Summary:The design of reversible-covalent molecules to selectively target the ε-amino functionality of lysine residues in enzymes or proteins is a highly desirable goal. Herein, we describe synthetic methodology used to prepare a series of 5′-thymidine-linked formylphenylboronic acids as probes to interrogate sugar nucleotide processing enzymes that recognize thymidine. The first synthetic strategy mitigated the need for protecting group manipulations of thymidine by capitalizing upon the straightforward preparation, isolation, and reactivity of 5′-azidothymidine. An alkyne cycloaddition partner was installed through either a propargyl or ethynyl phenyl ketone derived boronic acid. The second strategy directly linked formylphenylboronic acids to 5-thymidine through an ether linkage installed using Mitsunobu conditions with 3′-O,3-dibenzoylthymidine. Iminoboronate formation was observed with a selected probe.
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ISSN:0022-3263
1520-6904
DOI:10.1021/acs.joc.2c01000