Search Results - "Septiningsih, Endang"

Optimization of gene editing in cowpea through protoplast transformation and agroinfiltration by targeting the phytoene desaturase gene by Bridgeland, Aya, Biswas, Sudip, Tsakirpaloglou, Nikolaos, Thomson, Michael J, Septiningsih, Endang M

“…Cowpea (Vigna unguiculata) is a legume staple widely grown across Sub-Saharan Africa and other tropical and sub-tropical regions. Considering projected climate…”
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An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies by Morales, Karina Y, Singh, Namrata, Perez, Francisco Agosto, Ignacio, John Carlos, Thapa, Ranjita, Arbelaez, Juan D, Tabien, Rodante E, Famoso, Adam, Wang, Diane R, Septiningsih, Endang M, Shi, Yuxin, Kretzschmar, Tobias, McCouch, Susan R, Thomson, Michael J

“…Single nucleotide polymorphisms (SNPs) are highly abundant, amendable to high-throughput genotyping, and useful for a number of breeding and genetics…”
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Carbon Nanotube-Mediated Plasmid DNA Delivery in Rice Leaves and Seeds by Dunbar, Tia, Tsakirpaloglou, Nikolaos, Septiningsih, Endang M, Thomson, Michael J

“…CRISPR-Cas gene editing technologies offer the potential to modify crops precisely; however, in vitro plant transformation and regeneration techniques present…”
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Raman Spectroscopy Enables Non-invasive and Confirmatory Diagnostics of Salinity Stresses, Nitrogen, Phosphorus, and Potassium Deficiencies in Rice by Sanchez, Lee, Ermolenkov, Alexei, Biswas, Sudip, Septiningsih, Endang M., Kurouski, Dmitry

“…Proper management of nutrients in agricultural systems is critically important for maximizing crop yields while simultaneously minimizing the health and…”
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Improved Transformation and Regeneration of Indica Rice: Disruption of SUB1A as a Test Case via CRISPR-Cas9 by Liang, Yuya, Biswas, Sudip, Kim, Backki, Bailey-Serres, Julia, Septiningsih, Endang M.

“…Gene editing by use of clustered regularly interspaced short palindromic repeats (CRISPR) has become a powerful tool for crop improvement. However, a common…”
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Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress by Thapa, Ranjita, Tabien, Rodante E, Johnson, Charles D, Septiningsih, Endang M

“…Rice is one of the most important cereals consumed worldwide. Two major abiotic factors affecting rice plants in different growth stages are flooding stress…”
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Optimization of Prime Editing in Rice, Peanut, Chickpea, and Cowpea Protoplasts by Restoration of GFP Activity by Biswas, Sudip, Bridgeland, Aya, Irum, Samra, Thomson, Michael J, Septiningsih, Endang M

“…Precise editing of the plant genome has long been desired for functional genomic research and crop breeding. Prime editing is a newly developed precise editing…”
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Functional Allele Validation by Gene Editing to Leverage the Wealth of Genetic Resources for Crop Improvement by Thomson, Michael J., Biswas, Sudip, Tsakirpaloglou, Nikolaos, Septiningsih, Endang M.

“…Advances in molecular technologies over the past few decades, such as high-throughput DNA marker genotyping, have provided more powerful plant breeding…”
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Genetics, Physiological Mechanisms and Breeding of Flood-Tolerant Rice (Oryza sativa L.) by Singh, Anuradha, Septiningsih, Endang M, Balyan, Harendra S, Singh, Nagendra K, Rai, Vandna

“…Flooding of rice fields is a serious problem in the river basins of South and South-East Asia where about 15 Mha of lowland rice cultivation is regularly…”
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Increasing flooding tolerance in rice: combining tolerance of submergence and of stagnant flooding by Kato, Yoichiro, Collard, Bertrand C Y, Septiningsih, Endang M, Ismail, Abdelbagi M

“…Rice ecosystems in the tropical coastal areas are subject to two types of flooding stress: transient complete submergence and long-term water stagnation…”
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EGRINs (Environmental Gene Regulatory Influence Networks) in Rice That Function in the Response to Water Deficit, High Temperature, and Agricultural Environments by Wilkins, Olivia, Hafemeister, Christoph, Plessis, Anne, Holloway-Phillips, Meisha-Marika, Pham, Gina M., Nicotra, Adrienne B., Gregorio, Glenn B., Jagadish, S.V. Krishna, Septiningsih, Endang M., Bonneau, Richard, Purugganan, Michael

“…Environmental gene regulatory influence networks (EGRINs) coordinate the timing and rate of gene expression in response to environmental signals. EGRINs…”
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Optimizing Agrobacterium -Mediated Transformation and CRISPR-Cas9 Gene Editing in the tropical japonica Rice Variety Presidio by Molina-Risco, Marco, Ibarra, Oneida, Faion-Molina, Mayra, Kim, Backki, Septiningsih, Endang M, Thomson, Michael J

“…Bottlenecks in plant transformation and regeneration have slowed progress in applying CRISPR/Cas-based genome editing for crop improvement. Rice ( L.) has…”
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Optimization of Protoplast Isolation and Transformation for a Pilot Study of Genome Editing in Peanut by Targeting the Allergen Gene Ara h 2 by Biswas, Sudip, Wahl, Nancy J, Thomson, Michael J, Cason, John M, McCutchen, Bill F, Septiningsih, Endang M

“…The cultivated peanut ( L.) is a legume consumed worldwide in the form of oil, nuts, peanut butter, and candy. Improving peanut production and nutrition will…”
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Mapping QTLs for Reproductive Stage Salinity Tolerance in Rice Using a Cross between Hasawi and BRRI dhan28 by Mondal, Sejuti, Septiningsih, Endang M., Singh, Rakesh K., Thomson, Michael J.

“…Salinity stress is a major constraint to rice production in many coastal regions due to saline groundwater and river sources, especially during the dry season…”
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Transcriptome profiling of two rice varieties reveals their molecular responses under high night-time temperature by Mustahsan, Wardah K, Liang, Yuya, Mohammed, Abdul R, Johnson, Charles D, Septiningsih, Endang M, Tarpley, Lee, Thomson, Michael J

“…High night-time temperatures (HNT) pose a threat to the sustainability of crop production, including rice. HNT can affect crop productivity and quality by…”
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A trehalose-6-phosphate phosphatase enhances anaerobic germination tolerance in rice by Kretzschmar, Tobias, Pelayo, Margaret Anne F., Trijatmiko, Kurniawan R., Gabunada, Lourd Franz M., Alam, Rejbana, Jimenez, Rosario, Mendioro, Merlyn S., Slamet-Loedin, Inez H., Sreenivasulu, Nese, Bailey-Serres, Julia, Ismail, Abdelbagi M., Mackill, David J., Septiningsih, Endang M.

“…Global socioeconomic developments create strong incentives for farmers to shift from transplanted to direct-seeded rice (DSR) as a means of intensification and…”
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Genetic factors underlying anaerobic germination in rice: Genome‐wide association study and transcriptomic analysis by Thapa, Ranjita, Tabien, Rodante E., Thomson, Michael J., Septiningsih, Endang M.

“…The success of rice (Oryza sativa L.) germination and survival under submerged conditions is mainly determined by the rapid growth of the coleoptile to reach…”
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Rice breeding for low input agriculture by Jyoti, Subroto Das, Singh, Gurjeet, Pradhan, Anjan Kumar, Tarpley, Lee, Septiningsih, Endang M, Talukder, Shyamal K

“…A low-input-based farming system can reduce the adverse effects of modern agriculture through proper utilization of natural resources. Modern varieties often…”
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Genome-wide association study to identify chromosomal regions related to panicle architecture in rice (Oryza sativa) by Thapa, Ranjita, Tabien, Rodante E., Septiningsih, Endang M.

“…Panicle architecture directly affects the grain yield of rice; meanwhile, crop domestication has increased the complexity of rice panicle size and branching…”
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Diagnosing arsenic-mediated biochemical responses in rice cultivars using Raman spectroscopy by Juárez, Isaac D, Dou, Tianyi, Biswas, Sudip, Septiningsih, Endang M, Kurouski, Dmitry

“…Rice ( ) is the primary crop for nearly half of the world's population. Groundwater in many rice-growing parts of the world often has elevated levels of…”
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