Search Results - "Sengupta, Pallabi"
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The Molecular Tête‐à‐Tête between G‐Quadruplexes and the i‐motif in the Human Genome
Published in Chembiochem : a European journal of chemical biology (04-05-2021)“…G‐Quadruplex (GQ) and i‐motif structures are the paradigmatic examples of nonclassical tetrastranded nucleic acids having multifarious biological functions and…”
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In Silico Screening and Binding Characterization of Small Molecules toward a G‑Quadruplex Structure Formed in the Promoter Region of c‑MYC Oncogene
Published in ACS omega (31-08-2017)“…Overexpression of c-MYC oncogene is associated with cancer pathology. Expression of c-MYC is regulated by the G-quadruplex structure formed in the G-rich…”
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3
Inosine 5′-diphosphate, a molecular decoy rescues Nucleoside diphosphate kinase from c-MYC G-Quadruplex unfolding
Published in Biochimica et biophysica acta. General subjects (01-09-2020)“…The transcription-inhibitory G-Quadruplex(Pu27-GQ) at c-MYC promoter is challenging to target due to structural heterogeneity. Nucleoside diphosphate kinase…”
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4
Truncated G‑Quadruplex Isomers Cross-Talk with the Transcription Factors To Maintain Homeostatic Equilibria in c‑MYC Transcription
Published in Biochemistry (Easton) (16-04-2019)“…The nuclease hypersensitive element III1 (NHE III1) upstream c-MYC promoter harbors a transcription-silencing G-quadruplex (Pu27) element. Dynamic turnover of…”
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G-Quadruplex surveillance in BCL-2 gene: a promising therapeutic intervention in cancer treatment
Published in Drug discovery today (01-08-2017)“…•The atomic-level structures of G-quadruplexes in BCL-2 promoter/transcripts are described.•G-quadruplexes contribute to cellular processes and oncogenic…”
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Switchable tetraplex elements in the heterogeneous nuclear ribonucleoprotein K promoter: micro-environment dictated structural transitions of G/C rich elements
Published in Journal of biomolecular structure & dynamics (18-01-2024)“…We have elucidated the hnRNP K promoter as a hotspot for tetraplex-based molecular switches receptive to micro-environmental stimuli. We have characterised the…”
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Chelerythrine down regulates expression of VEGFA, BCL2 and KRAS by arresting G-Quadruplex structures at their promoter regions
Published in Scientific reports (19-01-2017)“…A putative anticancer plant alkaloid, Chelerythrine binds to G-quadruplexes at promoters of VEGFA, BCL2 and KRAS genes and down regulates their expression. The…”
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Long non-coding intergenic RNA, LINC00273 induces cancer metastasis and stemness via miRNA sponging in triple negative breast cancer
Published in International journal of biological macromolecules (01-08-2024)“…LncRNAs and miRNAs, being the master regulators of gene expression, are crucial functional mediators in cancer. Our study unveils the critical regulatory role…”
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9
Site-specific amino acid substitution in dodecameric peptides determines the stability and unfolding of c-MYC quadruplex promoting apoptosis in cancer cells
Published in Nucleic acids research (02-11-2018)“…Abstract c-MYC proto-oncogene harbours a transcription-inhibitory quadruplex-forming scaffold (Pu27) upstream P1 promoter providing anti-neoplastic therapeutic…”
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10
Promoter G-quadruplex favours epigenetic reprogramming-induced atypical expression of ZEB1 in cancer cells
Published in Biochimica et biophysica acta. General subjects (01-08-2021)“…Aberrant expression of Zinc-finger E-box binding homeobox 1 (ZEB1), which remains repressed in normal cells, is frequently associated with cancer…”
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11
Spatial Position Regulates Power of Tryptophan: Discovery of a Major-Groove-Specific Nuclear-Localizing, Cell-Penetrating Tetrapeptide
Published in Journal of the American Chemical Society (07-02-2018)“…Identification of key amino acids is required for development of efficient cell-penetrating peptides (CPPs) and has tremendous implications in medicine…”
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12
Myricetin arrests human telomeric G-quadruplex structure: a new mechanistic approach as an anticancer agent
Published in Molecular bioSystems (01-01-2016)“…The use of small molecules to arrest G-quadruplex structure has become a potential strategy for the development and design of a new class of anticancer…”
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13
G-quadruplex structural dynamics at MAPK12 promoter dictates transcriptional switch to determine stemness in breast cancer
Published in Cellular and molecular life sciences : CMLS (01-12-2024)“…P38γ (MAPK12) is predominantly expressed in triple negative breast cancer cells (TNBC) and induces stem cell (CSC) expansion resulting in decreased survival of…”
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14
Restriction of telomerase capping by short non-toxic peptides via arresting telomeric G-quadruplex
Published in RSC advances (01-01-2017)“…The stabilization of a G-quadruplex structure in human telomeric DNA has become a promising strategy in the development of cancer therapeutics. Here, we report…”
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The tumor suppressor FBXO31 preserves genomic integrity by regulating DNA replication and segregation through precise control of cyclin A levels
Published in The Journal of biological chemistry (11-10-2019)“…F-box protein 31 (FBXO31) is a reported putative tumor suppressor, and its inactivation due to loss of heterozygosity is associated with cancers of different…”
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A new G-quadruplex-specific photosensitizer inducing genome instability in cancer cells by triggering oxidative DNA damage and impeding replication fork progression
Published in Nucleic acids research (07-07-2023)“…Abstract Photodynamic therapy (PDT) ideally relies on the administration, selective accumulation and photoactivation of a photosensitizer (PS) into diseased…”
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Targeting Oncogene Promoters and Ribosomal RNA Biogenesis by G‑Quadruplex Binding Ligands Translate to Anticancer Activity
Published in ACS bio & med chem au (20-04-2022)“…G-Quadruplex (GQ) nucleic acids are promising therapeutic targets in anticancer research due to their structural robustness, polymorphism, and gene-regulatory…”
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18
Traces of statistical learning in the brain's functional connectivity after artificial language exposure
Published in Neuropsychologia (18-02-2019)“…Our environment is full of statistical regularities, and we are attuned to learn about these regularities by employing Statistical Learning (SL), a…”
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SMAR1 inhibits Wnt/β-catenin signaling and prevents colorectal cancer progression
Published in Oncotarget (20-04-2018)“…Reduced expression of Scaffold/Matrix Attachment Region Binding Protein 1 (SMAR1) is associated with various cancers resulting in poor prognosis of the…”
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LINCRNA00273 promotes cancer metastasis and its G-Quadruplex promoter can serve as a novel target to inhibit cancer invasiveness
Published in Oncotarget (15-12-2017)“…Discovery of anti-metastatic drugs is of immense clinical significance as metastasis is responsible for 90% of all cancer deaths. Here we report the inhibitory…”
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