Search Results - "Segura, Vincent"

Genome-Wide Association in Tomato Reveals 44 Candidate Loci for Fruit Metabolic Traits by Sauvage, Christopher, Segura, Vincent, Bauchet, Guillaume, Stevens, Rebecca, Do, Phuc Thi, Nikoloski, Zoran, Fernie, Alisdair R., Causse, Mathilde

“…Genome-wide association studies have been successful in identifying genes involved in polygenic traits and are valuable for crop improvement. Tomato (Solarium…”
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eQTLs are key players in the integration of genomic and transcriptomic data for phenotype prediction by Wade, Abdou Rahmane, Duruflé, Harold, Sanchez, Leopoldo, Segura, Vincent

“…Abstract Background Multi-omics represent a promising link between phenotypes and genome variation. Few studies yet address their integration to understand…”
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Phenomic Selection Is a Low-Cost and High-Throughput Method Based on Indirect Predictions: Proof of Concept on Wheat and Poplar by Rincent, Renaud, Charpentier, Jean-Paul, Faivre-Rampant, Patricia, Paux, Etienne, Le Gouis, Jacques, Bastien, Catherine, Segura, Vincent

“…Genomic selection - the prediction of breeding values using DNA polymorphisms - is a disruptive method that has widely been adopted by animal and plant…”
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Identification of major loci and genomic regions controlling acid and volatile content in tomato fruit: implications for flavor improvement by Bauchet, Guillaume, Grenier, Stéphane, Samson, Nicolas, Segura, Vincent, Kende, Aniko, Beekwilder, Jules, Cankar, Katarina, Gallois, Jean‐Luc, Gricourt, Justine, Bonnet, Julien, Baxter, Charles, Grivet, Laurent, Causse, Mathilde

“…Plant metabolites are important to world food security due to their roles in crop yield and nutritional quality. Here we report the metabolic profile of 300…”
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GWAPP: A Web Application for Genome-Wide Association Mapping in Arabidopsis by Seren, Ümit, Vilhjálmsson, Bjarni J., Horton, Matthew W., Meng, Dazhe, Forai, Petar, Huang, Yu S., Long, Quan, Segura, Vincent, Nordborg, Magnus

“…Arabidopsis thaliana is an important model organism for understanding the genetics and molecular biology of plants. Its highly self ing nature, small size,…”
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Favorable Conditions for Genomic Evaluation to Outperform Classical Pedigree Evaluation Highlighted by a Proof-of-Concept Study in Poplar by Pégard, Marie, Segura, Vincent, Muñoz, Facundo, Bastien, Catherine, Jorge, Véronique, Sanchez, Leopoldo

“…Forest trees like poplar are particular in many ways compared to other domesticated species. They have long juvenile phases, ongoing crop-wild gene flow,…”
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Accuracy of RNAseq based SNP discovery and genotyping in Populus nigra by Rogier, Odile, Chateigner, Aurélien, Amanzougarene, Souhila, Lesage Descauses, Marie-Claude, Balzergue, Sandrine, Brunaud, Véronique, Caius, José, Soubigou-Taconnat, Ludivine, Jorge, Véronique, Segura, Vincent

“…Backgroud Populus nigra is a major tree species of ecological and economic importance for which several initiatives have been set up to create genomic…”
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LAMINA: a tool for rapid quantification of leaf size and shape parameters by Bylesjö, Max, Segura, Vincent, Soolanayakanahally, Raju Y, Rae, Anne M, Trygg, Johan, Gustafsson, Petter, Jansson, Stefan, Street, Nathaniel R

“…An increased understanding of leaf area development is important in a number of fields: in food and non-food crops, for example short rotation forestry as a…”
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Interest of phenomic prediction as an alternative to genomic prediction in grapevine by Brault, Charlotte, Lazerges, Juliette, Doligez, Agnès, Thomas, Miguel, Ecarnot, Martin, Roumet, Pierre, Bertrand, Yves, Berger, Gilles, Pons, Thierry, François, Pierre, Le Cunff, Loïc, This, Patrice, Segura, Vincent

“…Abstract Background Phenomic prediction has been defined as an alternative to genomic prediction by using spectra instead of molecular markers. A reflectance…”
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Gene expression predictions and networks in natural populations supports the omnigenic theory by Chateigner, Aurélien, Lesage-Descauses, Marie-Claude, Rogier, Odile, Jorge, Véronique, Leplé, Jean-Charles, Brunaud, Véronique, Roux, Christine Paysant-Le, Soubigou-Taconnat, Ludivine, Martin-Magniette, Marie-Laure, Sanchez, Leopoldo, Segura, Vincent

“…Recent literature on the differential role of genes within networks distinguishes core from peripheral genes. If previous works have shown contrasting features…”
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Transposon-induced gene activation as a mechanism generating cluster shape somatic variation in grapevine by Fernandez, Lucie, Torregrosa, Laurent, Segura, Vincent, Bouquet, Alain, Martinez-Zapater, José M

“…We have characterized the genetic and molecular origin of the reiterated reproductive meristem (RRM) somatic variant phenotype of grapevine cultivar Carignan…”
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Genetic structure and first genome‐wide insights into the adaptation of a wild relative of grapevine, Vitis berlandieri by Blois, Louis, de Miguel, Marina, Bert, Pierre‐François, Girollet, Nabil, Ollat, Nathalie, Rubio, Bernadette, Segura, Vincent, Voss‐Fels, Kai P., Schmid, Joachim, Marguerit, Elisa

“…In grafted plants, such as grapevine, increasing the diversity of rootstocks available to growers is an ideal strategy for helping plants to adapt to climate…”
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Genome-wide prediction methods in highly diverse and heterozygous species: proof-of-concept through simulation in grapevine by Fodor, Agota, Segura, Vincent, Denis, Marie, Neuenschwander, Samuel, Fournier-Level, Alexandre, Chatelet, Philippe, Homa, Félix Abdel Aziz, Lacombe, Thierry, This, Patrice, Le Cunff, Loic

“…Nowadays, genome-wide association studies (GWAS) and genomic selection (GS) methods which use genome-wide marker data for phenotype prediction are of much…”
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Target enrichment sequencing coupled with GWAS identifies MdPRX10 as a candidate gene in the control of budbreak in apple by Watson, Amy E, Guitton, Baptiste, Soriano, Alexandre, Rivallan, Ronan, Vignes, Hélène, Farrera, Isabelle, Huettel, Bruno, Arnaiz, Catalina, Falavigna, Vítor da Silveira, Coupel-Ledru, Aude, Segura, Vincent, Sarah, Gautier, Dufayard, Jean-François, Sidibe-Bocs, Stéphanie, Costes, Evelyne, Andrés, Fernando

“…The timing of floral budbreak in apple has a significant effect on fruit production and quality. Budbreak occurs as a result of a complex molecular mechanism…”
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The use of combining ability analysis to identify elite parents for Artemisia annua F1 hybrid production by Townsend, Theresa, Segura, Vincent, Chigeza, Godfree, Penfield, Teresa, Rae, Anne, Harvey, David, Bowles, Dianna, Graham, Ian A

“…Artemisia annua is an important medicinal crop used for the production of the anti-malarial compound artemisinin. In order to assist in the production of…”
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RNAseq based variant dataset in a black poplar association panel by Rogier, Odile, Chateigner, Aurélien, Lesage-Descauses, Marie-Claude, Mandin, Claire, Brunaud, Véronique, Caius, José, Soubigou-Taconnat, Ludivine, Almeida-Falcon, José, Bastien, Catherine, Benoit, Vanina, Bodineau, Guillaume, Boizot, Nathalie, Buret, Corinne, Charpentier, Jean-Paul, Déjardin, Annabelle, Delaunay, Alain, Fichot, Régis, Laine Prade, Véronique, Laurans, Françoise, Le Jan, Isabelle, Legac, Anne-Laure, Maury, Stéphane, Gebreselassie, Mesfin Nigussie, Poursat, Patrick, Ridel, Céline, Sanchez, Léopoldo, Jorge, Véronique, Segura, Vincent

“…Abstract Objective Black poplar ( Populus nigra L.) is a species native to Eurasia with a wide distribution area. It is an ecologically important species from…”
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Comparison of tree architecture using tree edit distances: application to 2-year-old apple hybrids by Segura, Vincent, Ouangraoua, Aïda, Ferraro, Pascal, Costes, Evelyne

“…In fruit trees, understanding genetic determinisms of architectural traits is considered as a promising manner to control vegetative development and yield…”
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Phenomic Selection: A New and Efficient Alternative to Genomic Selection by Robert, Pauline, Brault, Charlotte, Rincent, Renaud, Segura, Vincent

“…Recently, it has been proposed to switch molecular markers to near-infrared (NIR) spectra for inferring relationships between individuals and further…”
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An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations by Segura, Vincent, Vilhjálmsson, Bjarni J, Platt, Alexander, Korte, Arthur, Seren, Ümit, Long, Quan, Nordborg, Magnus

“…Magnus Nordborg and colleagues report a multi-locus mixed-model method (MLMM) for genome-wide association studies in structured populations. Their simulations…”
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A mixed-model approach for genome-wide association studies of correlated traits in structured populations by Korte, Arthur, Vilhjálmsson, Bjarni J, Segura, Vincent, Platt, Alexander, Long, Quan, Nordborg, Magnus

“…Magnus Nordborg and colleagues report a parameterized multi-trait mixed model (MTMM) method applied to genome-wide association studies of correlated…”
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