Search Results - "Schupp, J. M."

Multiple-Locus Variable-Number Tandem Repeat Analysis Reveals Genetic Relationships within Bacillus anthracis by Keim, P, Price, L B, Klevytska, A M, Smith, K L, Schupp, J M, Okinaka, R, Jackson, P J, Hugh-Jones, M E

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Coinfections identified from metagenomic analysis of cervical lymph nodes from tularemia patients by Birdsell, D N, Özsürekci, Y, Rawat, A, Aycan, A E, Mitchell, C L, Sahl, J W, Johansson, A, Colman, R E, Schupp, J M, Ceyhan, M, Keim, P S, Wagner, D M

“…Underlying coinfections may complicate infectious disease states but commonly go unnoticed because an a priori clinical suspicion is usually required so they…”
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DNA methylation and AFLP marker distribution in the soybean genome by Young, W.P, Schupp, J.M, Keim, P

“…Amplified fragment length polymorphisms (AFLPS) have become important markers for genetic mapping because of their ability to reliably detect variation at a…”
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Identification and Characterization of Variable-Number Tandem Repeats in the Yersinia pestis Genome by KLEVYTSKA, Alexandra M, PRICE, Lance B, SCHUPP, James M, WORSHAM, Patricia L, WONG, Jane, KEIM, Paul

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A microbiome assessment of medical marijuana by Thompson, G.R., Tuscano, J.M., Dennis, M., Singapuri, A., Libertini, S., Gaudino, R., Torres, A., Delisle, J.M.P., Gillece, J.D., Schupp, J.M., Engelthaler, D.M.

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Direct detection of Coccidioides from Arizona soils using CocciENV, a highly sensitive and specific real-time PCR assay by Bowers, J R, Parise, K L, Kelley, E J, Lemmer, D, Schupp, J M, Driebe, E M, Engelthaler, D M, Keim, P, Barker, B M

“…Coccidioides immitis and Coccidioides posadasii are soil fungi endemic to desert regions of the southwestern United States, and the causative agents of valley…”
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Molecular diversity in Bacillus anthracis by Keim, P, Klevytska, A.M, Price, L.B, Schupp, J.M, Zinser, G, Smith, K.L, Hugh-Jones, M.E, Okinaka, R, Hill, K.K, Jackson, P.J

“…Molecular typing of Bacillus anthracis has been extremely difficult due to the lack of polymorphic DNA markers. We have identified nine novel variable number…”
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Development and testing of a bacterial biosensor for toluene-based environmental contaminants by Willardson, B.M. (Brigham Young University, Provo, UT.), Wilkins, J.F, Rand, T.A, Schupp, J.M, Hill, K.K, Keim, P, Jackson, P.J

“…A bacterial biosensor for benzene, toluene, and similar compounds has been constructed, characterized, and field tested on contaminated water and soil. The…”
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Allele-specific hybridization markers for soybean by Coryell, V.H, Jessen, H, Schupp, J.M, Webb, D, Keim, P

“…Soybean (Glycine max) is one of the world's most important crop plants due to extensive genetic improvements using traditional breeding approaches. Recently,…”
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Comparative Genome Sequencing for Discovery of Novel Polymorphisms in Bacillus anthracis by Read, Timothy D., Salzberg, Steven L., Pop, Mihai, Shumway, Martin, Umayam, Lowell, Jiang, Lingxia, Holtzapple, Erik, Busch, Joseph D., Smith, Kimothy L., Schupp, James M., Solomon, Daniel, Keim, Paul, Fraser, Claire M.

“…Comparison of the whole-genome sequence of Bacillus anthracis isolated from a victim of a recent bioterrorist anthrax attack with a reference reveals 60 new…”
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Rapid bacterial permeabilization reagent useful for enzyme assays by Schupp, J M, Travis, S E, Price, L B, Shand, R F, Keim, P

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Detection of linked QTL for soybean brown stem rot resistance in 'BSR 101' as expressed in a growth chamber environment by Lewers, K.S. (Beltsville Agricultural Research Centre USDA-ARS-SARC, Beltsville, MD (USA).), Crane, E.H, Bronson, C.R, Schupp, J.M, Keim, P, Shoemaker, R.C

“…The objective of this study was to map the gene(s) conferring resistance to brown stem rot in the soybean cultivar BSR 101. A population of 320 recombinant…”
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In Vitro Selection and Characterization of Bacillus anthracis Mutants with High-Level Resistance to Ciprofloxacin by PRICE, Lance B, VOGLER, Amy, PEARSON, Talima, BUSCH, Joseph D, SCHUPP, James M, KEIM, Paul

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Internal and flanking sequence from AFLP fragments using ligation-mediated suppression PCR by Schupp, J M, Price, L B, Klevytska, A, Keim, P

“…Amplification fragment-length polymorphism (AFLP) analysis has proven to be a powerful tool for developing a large number of reliable genetic markers across a…”
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A high-density soybean genetic map based on AFLP markers by Keim, P. (Northern Arizona University, Flagstaff, AZ.), Schupp, J.M, Travis, S.E, Clayton, K, Zhu, T, Shi, L, Ferreira, A, Webb, D.M

“…Genetic marker systems have improved dramatically in the past 10 yr. Each new system needs to be evaluated for its distribution of markers on genetic linkage…”
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vrrB, a Hypervariable Open Reading Frame in Bacillus anthracis by Schupp, J M, Klevytska, A M, Zinser, G, Price, L B, Keim, P

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Multiple-Locus Variable-Number Tandem Repeat Analysis Reveals Genetic Relationships within Bacillus anthracis by Keim, P., Price, L. B., Klevytska, A. M., Smith, K. L., Schupp, J. M., Okinaka, R., Jackson, P. J., Hugh-Jones, M. E.

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Hypomethylated sequences: characterization of the duplicate soybean genome by Zhu, T, Schupp, J M, Oliphant, A, Keim, P

“…Soybean is believed to be a diploidized tetraploid generated from an allotetraploid ancestor. In this study, we used hypomethylated genomic DNA as a source of…”
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Use of a Real-Time PCR TaqMan Assay for Rapid Identification and Differentiation of Burkholderia pseudomallei and Burkholderia mallei by U'Ren, Jana M, Van Ert, Matthew N, Schupp, James M, Easterday, W. Ryan, Simonson, Tatum S, Okinaka, Richard T, Pearson, Talima, Keim, Paul

“…A TaqMan allelic-discrimination assay designed around a synonymous single-nucleotide polymorphism was used to genotype Burkholderia pseudomallei and…”
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Mass spectrometry provides accurate characterization of two genetic marker types in Bacillus anthracis by Van Ert, Matthew N, Hofstadler, Steven A, Jiang, Yun, Busch, Joseph D, Wagner, David M, Drader, Jared J, Ecker, David J, Hannis, James C, Huynh, Lynn Y, Schupp, James M, Simonson, Tatum S, Keim, Paul

“…Epidemiological and forensic analyses of bioterrorism events involving Bacillus anthracis could be improved if both variable number tandem repeats (VNTRs) and…”
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