Search Results - "Schröder, Markus"

Genefu: an R/Bioconductor package for computation of gene expression-based signatures in breast cancer by Gendoo, Deena M A, Ratanasirigulchai, Natchar, Schröder, Markus S, Paré, Laia, Parker, Joel S, Prat, Aleix, Haibe-Kains, Benjamin

“…Breast cancer is one of the most frequent cancers among women. Extensive studies into the molecular heterogeneity of breast cancer have produced a plethora of…”
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survcomp: an R/Bioconductor package for performance assessment and comparison of survival models by Schröder, Markus S., Culhane, Aedín C., Quackenbush, John, Haibe-Kains, Benjamin

“…The survcomp package provides functions to assess and statistically compare the performance of survival/risk prediction models. It implements state-of-the-art…”
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Multiple Origins of the Pathogenic Yeast Candida orthopsilosis by Separate Hybridizations between Two Parental Species by Schröder, Markus S, Martinez de San Vicente, Kontxi, Prandini, Tâmara H R, Hammel, Stephen, Higgins, Desmond G, Bagagli, Eduardo, Wolfe, Kenneth H, Butler, Geraldine

“…Mating between different species produces hybrids that are usually asexual and stuck as diploids, but can also lead to the formation of new species. Here, we…”
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PnB Designer: a web application to design prime and base editor guide RNAs for animals and plants by Siegner, Sebastian M, Karasu, Mehmet E, Schröder, Markus S, Kontarakis, Zacharias, Corn, Jacob E

“…The rapid expansion of the CRISPR toolbox through tagging effector domains to either enzymatically inactive Cas9 (dCas9) or Cas9 nickase (nCas9) has led to…”
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Genus-Wide Comparative Genomics of Malassezia Delineates Its Phylogeny, Physiology, and Niche Adaptation on Human Skin by Wu, Guangxi, Zhao, He, Li, Chenhao, Rajapakse, Menaka Priyadarsani, Wong, Wing Cheong, Xu, Jun, Saunders, Charles W, Reeder, Nancy L, Reilman, Raymond A, Scheynius, Annika, Sun, Sheng, Billmyre, Blake Robert, Li, Wenjun, Averette, Anna Floyd, Mieczkowski, Piotr, Heitman, Joseph, Theelen, Bart, Schröder, Markus S, De Sessions, Paola Florez, Butler, Geraldine, Maurer-Stroh, Sebastian, Boekhout, Teun, Nagarajan, Niranjan, Dawson, Jr, Thomas L

“…Malassezia is a unique lipophilic genus in class Malasseziomycetes in Ustilaginomycotina, (Basidiomycota, fungi) that otherwise consists almost exclusively of…”
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Comparative phenotypic analysis of the major fungal pathogens Candida parapsilosis and Candida albicans by Holland, Linda M, Schröder, Markus S, Turner, Siobhán A, Taff, Heather, Andes, David, Grózer, Zsuzsanna, Gácser, Attila, Ames, Lauren, Haynes, Ken, Higgins, Desmond G, Butler, Geraldine

“…Candida parapsilosis and Candida albicans are human fungal pathogens that belong to the CTG clade in the Saccharomycotina. In contrast to C. albicans,…”
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The coupling of the hydrated proton to its first solvation shell by Schröder, Markus, Gatti, Fabien, Lauvergnat, David, Meyer, Hans-Dieter, Vendrell, Oriol

“…The Zundel ( H 5 O 2 + ) and Eigen ( H 9 O 4 + ) cations play an important role as intermediate structures for proton transfer processes in liquid water. In…”
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Bassoon Specifically Controls Presynaptic P/Q-type Ca2+ Channels via RIM-Binding Protein by Davydova, Daria, Marini, Claudia, King, Claire, Klueva, Julia, Bischof, Ferdinand, Romorini, Stefano, Montenegro-Venegas, Carolina, Heine, Martin, Schneider, Romy, Schröder, Markus S., Altrock, Wilko D., Henneberger, Christian, Rusakov, Dmitri A., Gundelfinger, Eckart D., Fejtova, Anna

“…Voltage-dependent Ca2+channels (CaVs) represent the principal source of Ca2+ions that trigger evoked neurotransmitter release from presynaptic boutons…”
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Comparative genome analysis and gene finding in Candida species using CGOB by Maguire, Sarah L, ÓhÉigeartaigh, Seán S, Byrne, Kevin P, Schröder, Markus S, O'Gaora, Peadar, Wolfe, Kenneth H, Butler, Geraldine

“…The Candida Gene Order Browser (CGOB) was developed as a tool to visualize and analyze synteny relationships in multiple Candida species, and to provide an…”
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On the human consumption of the red seaweed dulse (Palmaria palmata (L.) Weber & Mohr) by Mouritsen, Ole G, Dawczynski, Christine, Duelund, Lars, Jahreis, Gerhard, Vetter, Walter, Schröder, Markus

“…The red seaweed dulse (Palmaria palmata) is one of the more popular seaweed species for human consumption in the Western world. With a documented historical…”
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The GenomeAsia 100K Project enables genetic discoveries across Asia by Wall, Jeffrey D, Stawiski, Eric W, Ratan, Aakrosh, Kim, Hie Lim, Kim, Changhoon, Gupta, Ravi, Suryamohan, Kushal

“…The underrepresentation of non-Europeans in human genetic studies so far has limited the diversity of individuals in genomic datasets and led to reduced…”
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State-resolved infrared spectrum of the protonated water dimer: revisiting the characteristic proton transfer doublet peak by Larsson, Henrik R, Schröder, Markus, Beckmann, Richard, Brieuc, Fabien, Schran, Christoph, Marx, Dominik, Vendrell, Oriol

“…The infrared (IR) spectra of protonated water clusters encode precise information on the dynamics and structure of the hydrated proton. However, the strong…”
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Identification of Non-Coding RNAs in the Candida parapsilosis Species Group by Donovan, Paul D, Schröder, Markus S, Higgins, Desmond G, Butler, Geraldine

“…The Candida CTG clade is a monophyletic group of fungal species that translates CTG as serine, and includes the pathogens Candida albicans and Candida…”
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High-Dimensional Quantum Dynamics Study on Excitation-Specific Surface Scattering Including Lattice Effects of a Five-Atom Surface Cell by Meng, Qingyong, Schröder, Markus, Meyer, Hans-Dieter

“…In this work, high-dimensional (21D) quantum dynamics calculations on the mode-specific surface scattering of a carbon monoxide molecule on a copper(100)…”
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Epitope-engineered human hematopoietic stem cells are shielded from CD123-targeted immunotherapy by Marone, Romina, Landmann, Emmanuelle, Devaux, Anna, Lepore, Rosalba, Seyres, Denis, Zuin, Jessica, Burgold, Thomas, Engdahl, Corinne, Capoferri, Giuseppina, Dell'Aglio, Alessandro, Larrue, Clément, Simonetta, Federico, Rositzka, Julia, Rhiel, Manuel, Andrieux, Geoffroy, Gallagher, Danielle N, Schröder, Markus S, Wiederkehr, Amélie, Sinopoli, Alessandro, Do Sacramento, Valentin, Haydn, Anna, Garcia-Prat, Laura, Divsalar, Christopher, Camus, Anna, Xu, Liwen, Bordoli, Lorenza, Schwede, Torsten, Porteus, Matthew, Tamburini, Jérôme, Corn, Jacob E, Cathomen, Toni, Cornu, Tatjana I, Urlinger, Stefanie, Jeker, Lukas T

“…Targeted eradication of transformed or otherwise dysregulated cells using monoclonal antibodies (mAb), antibody-drug conjugates (ADC), T cell engagers (TCE),…”
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Sodium butyrate protects mice from the development of the early signs of non-alcoholic fatty liver disease: role of melatonin and lipid peroxidation by Jin, Cheng Jun, Engstler, Anna Janina, Sellmann, Cathrin, Ziegenhardt, Doreen, Landmann, Marianne, Kanuri, Giridhar, Lounis, Hakima, Schröder, Markus, Vetter, Walter, Bergheim, Ina

“…Non-alcoholic fatty liver disease (NAFLD) is one of the most common liver diseases worldwide with universally accepted treatments still lacking. Oral…”
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The Indian cobra reference genome and transcriptome enables comprehensive identification of venom toxins by Suryamohan, Kushal, Krishnankutty, Sajesh P., Guillory, Joseph, Jevit, Matthew, Schröder, Markus S., Wu, Meng, Kuriakose, Boney, Mathew, Oommen K., Perumal, Rajadurai C., Koludarov, Ivan, Goldstein, Leonard D., Senger, Kate, Dixon, Mandumpala Davis, Velayutham, Dinesh, Vargas, Derek, Chaudhuri, Subhra, Muraleedharan, Megha, Goel, Ridhi, Chen, Ying-Jiun J., Ratan, Aakrosh, Liu, Peter, Faherty, Brendan, de la Rosa, Guillermo, Shibata, Hiroki, Baca, Miriam, Sagolla, Meredith, Ziai, James, Wright, Gus A., Vucic, Domagoj, Mohan, Sangeetha, Antony, Aju, Stinson, Jeremy, Kirkpatrick, Donald S., Hannoush, Rami N., Durinck, Steffen, Modrusan, Zora, Stawiski, Eric W., Wiley, Kristen, Raudsepp, Terje, Kini, R. Manjunatha, Zachariah, Arun, Seshagiri, Somasekar

“…Snakebite envenoming is a serious and neglected tropical disease that kills ~100,000 people annually. High-quality, genome-enabled comprehensive…”
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Investigation of unsaponifiable matter of plant oils and isolation of eight phytosterols by means of high-speed counter-current chromatography by Schröder, Markus, Vetter, Walter

“…► The unsaponifiable matter of rapeseed, olive and linseed oil was thoroughly analyzed by HSCCC. ► The HSCCC was operated in normal phase mode (tail-to-head)…”
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Recursive Editing improves homology-directed repair through retargeting of undesired outcomes by Möller, Lukas, Aird, Eric J., Schröder, Markus S., Kobel, Lena, Kissling, Lucas, van de Venn, Lilly, Corn, Jacob E.

“…CRISPR-Cas induced homology-directed repair (HDR) enables the installation of a broad range of precise genomic modifications from an exogenous donor template…”
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Effect of progesterone on Candida albicans biofilm formation under acidic conditions: A transcriptomic analysis by Gonçalves, Bruna, Bernardo, Ruben, Wang, Can, Schröder, Markus S., Pedro, Nuno A., Butler, Geraldine, Azeredo, Joana, Henriques, Mariana, Pereira Mira, Nuno, Silva, Sónia

“…Vulvovaginal candidiasis (VVC) caused by Candida albicans is a common disease worldwide. A very important C. albicans virulence factor is its ability to form…”
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