Search Results - "Scheeff, E D"
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CE-MC: a multiple protein structure alignment server
Published in Nucleic acids research (01-07-2004)“…CE-MC server (http://cemc.sdsc.edu) provides a web-based facility for the alignment of multiple protein structures based on C-α coordinate distances, using…”
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Molecular modeling of the intrastrand guanine-guanine DNA adducts produced by cisplatin and oxaliplatin
Published in Molecular pharmacology (01-09-1999)“…Intrastrand DNA adducts formed by cisplatin and oxaliplatin were modeled with molecular mechanics minimization and restrained molecular dynamics simulations in…”
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Structural evolution of the protein kinase-like superfamily
Published in PLoS computational biology (01-10-2005)“…The protein kinase family is large and important, but it is only one family in a larger superfamily of homologous kinases that phosphorylate a variety of…”
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A new algorithm for the alignment of multiple protein structures using Monte Carlo optimization
Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2001)“…We have developed a new algorithm for the alignment of multiple protein structures based on a Monte Carlo optimization technique. The algorithm uses pair-wise…”
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