Search Results - "Schaefer, Martin H."

Identifying Causes of Patterns in Ecological Networks: Opportunities and Limitations by Dormann, Carsten F, Fründ, Jochen, Schaefer, H. Martin

“…Ecological networks depict the interactions between species, mainly based on observations in the field. The information contained in such interaction matrices…”
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The origin and dynamic evolution of chemical information transfer by Steiger, Sandra, Schmitt, Thomas, Schaefer, H. Martin

“…Although chemical communication is the most widespread form of communication, its evolution and diversity are not well understood. By integrating studies of a…”
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Life history trade-offs are influenced by the diversity, availability and interactions of dietary antioxidants by Catoni, Carlo, Peters, Anne, Martin Schaefer, H.

“…The expression of most life history traits, such as immunity, growth and the development of sexual signals, is negatively affected by high levels of oxidative…”
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Cancer genomes tolerate deleterious coding mutations through somatic copy number amplifications of wild-type regions by Alfieri, Fabio, Caravagna, Giulio, Schaefer, Martin H.

“…Cancers evolve under the accumulation of thousands of somatic mutations and chromosomal aberrations. While most coding mutations are deleterious, almost all…”
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Author Correction: Cancer genomes tolerate deleterious coding mutations through somatic copy number amplifications of wild-type regions by Alfieri, Fabio, Caravagna, Giulio, Schaefer, Martin H.

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Translational efficiency across healthy and tumor tissues is proliferation‐related by Hernandez‐Alias, Xavier, Benisty, Hannah, Schaefer, Martin H, Serrano, Luis

“…Different tissues express genes with particular codon usage and anticodon tRNA repertoires. However, the codon–anticodon co‐adaptation in humans is not…”
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Financial Costs of Meeting Global Biodiversity Conservation Targets: Current Spending and Unmet Needs by McCarthy, Donal P., Donald, Paul F., Scharlemann, Jörn P. W., Buchanan, Graeme M., Balmford, Andrew, Green, Jonathan M. H., Bennun, Leon A., Burgess, Neil D., Fishpool, Lincoln D. C., Garnett, Stephen T., Leonard, David L., Maloney, Richard F., Morling, Paul, Schaefer, H. Martin, Symes, Andy, Wiedenfeld, David A., Butchart, Stuart H. M.

“…World governments have committed to halting human-induced extinctions and safeguarding important sites for biodiversity by 2020, but the financial costs of…”
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Deception in plants: mimicry or perceptual exploitation? by Schaefer, H. Martin, Ruxton, Graeme D.

“…Mimicry involves adaptive resemblance between a mimic and a model. However, despite much recent research, it remains contentious in plants. Here, we review…”
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Reward regulation in plant–frugivore networks requires only weak cues by Albrecht, Jörg, Hagge, Jonas, Schabo, Dana G., Schaefer, H. Martin, Farwig, Nina

“…Theory assumes that fair trade among mutualists requires highly reliable communication. In plant–animal mutualisms the reliability of cues that indicate reward…”
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Specialization on traits as basis for the niche-breadth of flower visitors and as structuring mechanism of ecological networks by Junker, Robert R., Blüthgen, Nico, Brehm, Tanja, Binkenstein, Julia, Paulus, Justina, Schaefer, H. Martin, Stang, Martina

“…1. Biotic interactions do not occur in isolation but are imbedded in a network of species interactions. Network analysis facilitates the compilation and…”
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Single-read tRNA-seq analysis reveals coordination of tRNA modification and aminoacylation and fragmentation by Hernandez-Alias, Xavier, Katanski, Christopher D, Zhang, Wen, Assari, Mahdi, Watkins, Christopher P, Schaefer, Martin H, Serrano, Luis, Pan, Tao

“…Transfer RNA (tRNA) utilizes multiple properties of abundance, modification, and aminoacylation in translational regulation. These properties were typically…”
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Using protein-per-mRNA differences among human tissues in codon optimization by Hernandez-Alias, Xavier, Benisty, Hannah, Radusky, Leandro G, Serrano, Luis, Schaefer, Martin H

“…Codon usage and nucleotide composition of coding sequences have profound effects on protein expression. However, while it is recognized that different tissues…”
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Projected impacts of climate change on habitat availability for an endangered parakeet by Hermes, Claudia, Keller, Klaus, Nicholas, Robert E, Segelbacher, Gernot, Schaefer, H Martin

“…In tropical montane cloud forests, climate change can cause upslope shifts in the distribution ranges of species, leading to reductions in distributional…”
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HIPPIE: Integrating protein interaction networks with experiment based quality scores by Schaefer, Martin H, Fontaine, Jean-Fred, Vinayagam, Arunachalam, Porras, Pablo, Wanker, Erich E, Andrade-Navarro, Miguel A

“…Protein function is often modulated by protein-protein interactions (PPIs) and therefore defining the partners of a protein helps to understand its activity…”
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Negative selection in tumor genome evolution acts on essential cellular functions and the immunopeptidome by Zapata, Luis, Pich, Oriol, Serrano, Luis, Kondrashov, Fyodor A, Ossowski, Stephan, Schaefer, Martin H

“…Natural selection shapes cancer genomes. Previous studies used signatures of positive selection to identify genes driving malignant transformation. However,…”
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Evolution and function of CAG/polyglutamine repeats in protein-protein interaction networks by Schaefer, Martin H, Wanker, Erich E, Andrade-Navarro, Miguel A

“…Expanded runs of consecutive trinucleotide CAG repeats encoding polyglutamine (polyQ) stretches are observed in the genes of a large number of patients with…”
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Silencing of SRRM4 suppresses microexon inclusion and promotes tumor growth across cancers by Head, Sarah A, Hernandez-Alias, Xavier, Yang, Jae-Seong, Ciampi, Ludovica, Beltran-Sastre, Violeta, Torres-Méndez, Antonio, Irimia, Manuel, Schaefer, Martin H, Serrano, Luis

“…RNA splicing is widely dysregulated in cancer, frequently due to altered expression or activity of splicing factors (SFs). Microexons are extremely small exons…”
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Disruptive coloration provides camouflage independent of background matching by Schaefer, H. Martin, Stobbe, Nina

“…Natural selection shapes the evolution of anti-predator defences, such as camouflage. It is currently contentious whether crypsis and disruptive coloration are…”
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The conservation physiology of seed dispersal by Ruxton, Graeme D., Schaefer, H. Martin

“…At a time when plant species are experiencing increasing challenges from climate change, land-use change, harvesting and invasive species, dispersal has become…”
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Spatiotemporal Proteomic Profiling of Huntington’s Disease Inclusions Reveals Widespread Loss of Protein Function by Hosp, Fabian, Gutiérrez-Ángel, Sara, Schaefer, Martin H., Cox, Jürgen, Meissner, Felix, Hipp, Mark S., Hartl, F.-Ulrich, Klein, Rüdiger, Dudanova, Irina, Mann, Matthias

“…Aggregation of polyglutamine-expanded huntingtin exon 1 (HttEx1) in Huntington’s disease (HD) proceeds from soluble oligomers to late-stage inclusions. The…”
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