Search Results - "Sartor, A"

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    annotatr: genomic regions in context by Cavalcante, Raymond G, Sartor, Maureen A

    Published in Bioinformatics (Oxford, England) (01-08-2017)
    “…Analysis of next-generation sequencing data often results in a list of genomic regions. These may include differentially methylated CpGs/regions, transcription…”
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    Journal Article
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    Metastatic castration‐sensitive prostate cancer: Abiraterone, docetaxel, or by Barata, Pedro C., Sartor, A. Oliver

    Published in Cancer (01-06-2019)
    “…For decades, the management of patients with advanced prostate cancer has been hormonal therapy, known as androgen deprivation therapy, which is intended to…”
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    Machine learning approaches and databases for prediction of drug–target interaction: a survey paper by Bagherian, Maryam, Sabeti, Elyas, Wang, Kai, Sartor, Maureen A, Nikolovska-Coleska, Zaneta, Najarian, Kayvan

    Published in Briefings in bioinformatics (18-01-2021)
    “…Abstract The task of predicting the interactions between drugs and targets plays a key role in the process of drug discovery. There is a need to develop novel…”
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    ER-stress-induced transcriptional regulation increases protein synthesis leading to cell death by Han, Jaeseok, Back, Sung Hoon, Hur, Junguk, Lin, Yu-Hsuan, Gildersleeve, Robert, Shan, Jixiu, Yuan, Celvie L., Krokowski, Dawid, Wang, Shiyu, Hatzoglou, Maria, Kilberg, Michael S., Sartor, Maureen A., Kaufman, Randal J.

    Published in Nature cell biology (01-05-2013)
    “…Protein misfolding in the endoplasmic reticulum (ER) leads to cell death through PERK-mediated phosphorylation of eIF2α, although the mechanism is not…”
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    MethylSig: a whole genome DNA methylation analysis pipeline by Park, Yongseok, Figueroa, Maria E, Rozek, Laura S, Sartor, Maureen A

    Published in Bioinformatics (Oxford, England) (01-09-2014)
    “…DNA methylation plays critical roles in gene regulation and cellular specification without altering DNA sequences. The wide application of reduced…”
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    Impact of cabazitaxel on 2-year survival and palliation of tumour-related pain in men with metastatic castration-resistant prostate cancer treated in the TROPIC trial by Bahl, A., Oudard, S., Tombal, B., Özgüroĝlu, M., Hansen, S., Kocak, I., Gravis, G., Devin, J., Shen, L., de Bono, J.S., Sartor, A.O.

    Published in Annals of oncology (01-09-2013)
    “…Cabazitaxel significantly improves overall survival (OS) versus mitoxantrone in patients with metastatic castration-resistant prostate cancer after docetaxel…”
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    Biomarkers in the Management and Treatment of Men with Metastatic Castration-Resistant Prostate Cancer by Armstrong, Andrew J, Eisenberger, Mario A, Halabi, Susan, Oudard, Stephane, Nanus, David M, Petrylak, Daniel P, Sartor, A. Oliver, Scher, Howard I

    Published in European urology (01-03-2012)
    “…Abstract Context We have recently witnessed a rapid increase in the number of effective systemic agents for men with metastatic castration-resistant prostate…”
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    PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data by Zhang, Yanxiao, Lin, Yu-Hsuan, Johnson, Timothy D, Rozek, Laura S, Sartor, Maureen A

    Published in Bioinformatics (Oxford, England) (15-09-2014)
    “…ChIP-Seq is the standard method to identify genome-wide DNA-binding sites for transcription factors (TFs) and histone modifications. There is a growing need to…”
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    MicroRNA-320 Is Involved in the Regulation of Cardiac Ischemia/Reperfusion Injury by Targeting Heat-Shock Protein 20 by REN, Xiao-Ping, JINGHAI WU, XIAOHONG WANG, SARTOR, Maureen A, JIANG QIAN, JONES, Keith, NICOLAOU, Persoulla, PRITCHARD, Tracy J, FAN, Guo-Chang

    Published in Circulation (New York, N.Y.) (05-05-2009)
    “…Recent studies have identified critical roles for microRNAs (miRNAs) in a variety of cellular processes, including regulation of cardiomyocyte death. However,…”
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    Germline BLM mutations and metastatic prostate cancer by Ledet, Elisa M., Antonarakis, Emmanuel S., Isaacs, William B., Lotan, Tamara L., Pritchard, Colin, Sartor, A. Oliver

    Published in The Prostate (01-02-2020)
    “…Background Biallelic loss‐of‐function BLM mutations result in Bloom syndrome: a genetic disorder characterized by growth deficiencies, photosensitivity, and…”
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    Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data by Karnovsky, Alla, Weymouth, Terry, Hull, Tim, Tarcea, V. Glenn, Scardoni, Giovanni, Laudanna, Carlo, Sartor, Maureen A., Stringer, Kathleen A., Jagadish, H. V., Burant, Charles, Athey, Brian, Omenn, Gilbert S.

    Published in Bioinformatics (01-02-2012)
    “…Motivation: Metabolomics is a rapidly evolving field that holds promise to provide insights into genotype-phenotype relationships in cancers, diabetes and…”
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    Prognosis of isolated congenital diaphragmatic hernia using lung‐area‐to‐head‐circumference ratio: variability across centers in a national perinatal network by Senat, M.‐V., Bouchghoul, H., Stirnemann, J., Vaast, P., Boubnova, J., Begue, L., Carricaburu, E., Sartor, A., Jani, J., Benachi, A., Bouyer, J.

    Published in Ultrasound in obstetrics & gynecology (01-02-2018)
    “…ABSTRACT Objective Congenital diaphragmatic hernia (CDH) is a severe anomaly. The observed‐to‐expected lung‐area‐to‐head‐circumference ratio (o/e‐LHR) has been…”
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    Progression of metastatic castrate-resistant prostate cancer: impact of therapeutic intervention in the post-docetaxel space by Sartor, A Oliver

    Published in Journal of hematology and oncology (23-04-2011)
    “…Despite the proven success of hormonal therapy for prostate cancer using chemical or surgical castration, most patients eventually will progress to a phase of…”
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    LRpath: a logistic regression approach for identifying enriched biological groups in gene expression data by Sartor, Maureen A., Leikauf, George D., Medvedovic, Mario

    Published in Bioinformatics (15-01-2009)
    “…Motivation: The elucidation of biological pathways enriched with differentially expressed genes has become an integral part of the analysis and interpretation…”
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