Search Results - "Saripella, Ganapathi Varma"

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    Comprehensive transcriptome analysis of different potato cultivars provides insight into early blight disease caused by Alternaria solani by Sajeevan, Radha Sivarajan, Abdelmeguid, Ingi, Saripella, Ganapathi Varma, Lenman, Marit, Alexandersson, Erik

    Published in BMC plant biology (08-03-2023)
    “…Early blight, caused by the necrotrophic fungal pathogen Alternaria solani, is an economically important disease affecting the tuber yield worldwide. The…”
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    Journal Article
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    Spatio-temporal transcriptome and storage compound profiles of developing faba bean ( Vicia faba ) seed tissues by Ohm, Hannah, Saripella, Ganapathi Varma, Hofvander, Per, Grimberg, Åsa

    Published in Frontiers in plant science (06-02-2024)
    “…Faba bean ( ) is a legume grown in diverse climate zones with a high potential for increased cultivation and use in food due to its nutritional seeds. In this…”
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    MACARON: a python framework to identify and re-annotate multi-base affected codons in whole genome/exome sequence data by Khan, Waqasuddin, Varma Saripella, Ganapathi, Ludwig, Thomas, Cuppens, Tania, Thibord, Florian, Génin, Emmanuelle, Deleuze, Jean-Francois, Trégouët, David-Alexandre

    Published in Bioinformatics (01-10-2018)
    “…Abstract Summary Predicted deleteriousness of coding variants is a frequently used criterion to filter out variants detected in next-generation sequencing…”
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    Transcriptional Regulation of Quinoa Seed Quality: Identification of Novel Candidate Genetic Markers for Increased Protein Content by Grimberg, Åsa, Saripella, Ganapathi Varma, Repo-Carrasco Valencia, Ritva Ann-Mari, Bengtsson, Therése, Alandia, Gabriela, Carlsson, Anders S.

    Published in Frontiers in plant science (02-06-2022)
    “…Quinoa ( Chenopodium quinoa Willd.) is a crop that has great potential for increased cultivation in diverse climate regions. The seed protein quality obtained…”
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    Journal Article
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    QTL Mapping for Domestication-Related Characteristics in Field Cress (Lepidium campestre)—A Novel Oil Crop for the Subarctic Region by Hammenhag, Cecilia, Saripella, Ganapathi Varma, Ortiz, Rodomiro, Geleta, Mulatu

    Published in Genes (19-10-2020)
    “…Domestication of a new crop requires identification and improvement of desirable characteristics Field cress (Lepidium campestre) is being domesticated as a…”
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    Effect of RNA silencing suppression activity of chrysanthemum virus B p12 protein on small RNA species by Vetukuri, Ramesh R., Kalyandurg, Pruthvi B., Saripella, Ganapathi Varma, Sen, Diya, Gil, Jose Fernando, Lukhovitskaya, Nina I., Grenville-Briggs, Laura J., Savenkov, Eugene I.

    Published in Archives of virology (01-12-2020)
    “…Chrysanthemum virus B encodes a multifunctional p12 protein that acts as a transcriptional activator in the nucleus and as a suppressor of RNA silencing in the…”
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    Genetic diversity of avocado from the southern highlands of Tanzania as revealed by microsatellite markers by Juma, Ibrahim, Geleta, Mulatu, Nyomora, Agnes, Saripella, Ganapathi Varma, Hovmalm, Helena Persson, Carlsson, Anders S., Fatih, Moneim, Ortiz, Rodomiro

    Published in Hereditas (14-09-2020)
    “…Abstract Background Avocado is an important cash crop in Tanzania, however its genetic diversity is not thoroughly investigated. This study was undertaken to…”
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    Journal Article
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    QTL Mapping and Transcriptome Analysis to Identify Differentially Expressed Genes Induced by Septoria Tritici Blotch Disease of Wheat by Odilbekov, Firuz, He, Xinyao, Armoniené, Rita, Saripella, Ganapathi Varma, Henriksson, Tina, Singh, Pawan Kumar, Chawade, Aakash

    Published in Agronomy (Basel) (04-09-2019)
    “…Resistance to Septoria tritici blotch (STB) is an economically important trait in many wheat-breeding programs across the world. Several quantitative trait…”
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    Genome-wide association analysis in dilated cardiomyopathy reveals two new players in systolic heart failure on chromosomes 3p25.1 and 22q11.23 by Garnier, Sophie, Harakalova, Magdalena, Weiss, Stefan, Mokry, Michal, Regitz-Zagrosek, Vera, Hengstenberg, Christian, Cappola, Thomas P, Isnard, Richard, Arbustini, Eloisa, Cook, Stuart A, van Setten, Jessica, Calis, Jorg J A, Hakonarson, Hakon, Morley, Michael P, Stark, Klaus, Prasad, Sanjay K, Li, Jin, O'Regan, Declan P, Grasso, Maurizia, Müller-Nurasyid, Martina, Meitinger, Thomas, Empana, Jean-Philippe, Strauch, Konstantin, Waldenberger, Melanie, Marguiles, Kenneth B, Seidman, Christine E, Kararigas, Georgios, Meder, Benjamin, Haas, Jan, Boutouyrie, Pierre, Lacolley, Patrick, Jouven, Xavier, Erdmann, Jeanette, Blankenberg, Stefan, Wichter, Thomas, Ruppert, Volker, Tavazzi, Luigi, Dubourg, Olivier, Roizes, Gérard, Dorent, Richard, de Groote, Pascal, Fauchier, Laurent, Trochu, Jean-Noël, Aupetit, Jean-François, Bilinska, Zofia T, Germain, Marine, Völker, Uwe, Hemerich, Daiane, Raji, Ibticem, Bacq-Daian, Delphine, Proust, Carole, Remior, Paloma, Gomez-Bueno, Manuel, Lehnert, Kristin, Maas, Renee, Olaso, Robert, Saripella, Ganapathi Varma, Felix, Stephan B, McGinn, Steven, Duboscq-Bidot, Laëtitia, van Mil, Alain, Besse, Céline, Fontaine, Vincent, Blanché, Hélène, Ader, Flavie, Keating, Brendan, Curjol, Angélique, Boland, Anne, Komajda, Michel, Cambien, François, Deleuze, Jean-François, Dörr, Marcus, Asselbergs, Folkert W, Villard, Eric, Trégouët, David-Alexandre, Charron, Philippe

    Published in European heart journal (21-05-2021)
    “…Abstract Aims  Our objective was to better understand the genetic bases of dilated cardiomyopathy (DCM), a leading cause of systolic heart failure. Methods and…”
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    Benchmarking the next generation of homology inference tools by Saripella, Ganapathi Varma, Sonnhammer, Erik L L, Forslund, Kristoffer

    Published in Bioinformatics (Oxford, England) (01-09-2016)
    “…Over the last decades, vast numbers of sequences were deposited in public databases. Bioinformatics tools allow homology and consequently functional inference…”
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    Genome-wide association analysis in dilated cardiomyopathy reveals two new players in systolic heart failure on chromosomes 3p25.1 and 22q11.23 by Garnier, Sophie, Harakalova, Magdalena, Weiss, Stefan, Mokry, Michal, Regitz-Zagrosek, Vera, Hengstenberg, Christian, Cappola, Thomas, Isnard, Richard, Arbustini, Eloisa, Cook, Stuart, van Setten, Jessica, Calis, Jorg, Hakonarson, Hakon, Morley, Michael, Stark, Klaus, Prasad, Sanjay, Li, Jin, O'Regan, Declan, Grasso, Maurizia, Müller-Nurasyid, Martina, Meitinger, Thomas, Empana, Jean-Philippe, Strauch, Konstantin, Waldenberger, Melanie, Marguiles, Kenneth, Seidman, Christine, Kararigas, Georgios, Meder, Benjamin, Haas, Jan, Boutouyrie, Pierre, Lacolley, Patrick, Jouven, Xavier, Erdmann, Jeanette, Blankenberg, Stefan, Wichter, Thomas, Ruppert, Volker, Tavazzi, Luigi, Dubourg, Olivier, Roizes, Gérard, Dorent, Richard, de Groote, Pascal, Fauchier, Laurent, Trochu, Jean-Noël, Aupetit, Jean-François, Bilinska, Zofia, Germain, Marine, Völker, Uwe, Hemerich, Daiane, Raji, Ibticem, Bacq-Daian, Delphine, Proust, Carole, Remior, Paloma, Gomez-Bueno, Manuel, Lehnert, Kristin, Maas, Renee, Olaso, Robert, Saripella, Ganapathi Varma, Felix, Stephan, Mcginn, Steven, Duboscq-Bidot, Laëtitia, van Mil, Alain, Besse, Céline, Fontaine, Vincent, Blanché, Hélène, Ader, Flavie, Keating, Brendan, Curjol, Angélique, Boland, Anne, Komajda, Michel, Cambien, François, Deleuze, Jean-François, Dörr, Marcus, Asselbergs, Folkert, Villard, Eric, Trégouët, David-Alexandre, Charron, Philippe

    Published in European heart journal (21-05-2021)
    “…Abstract Aims Our objective was to better understand the genetic bases of dilated cardiomyopathy (DCM), a leading cause of systolic heart failure. Methods and…”
    Get full text
    Journal Article
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    Genome-wide association analysis in dilated cardiomyopathy reveals two new players in systolic heart failure on chromosomes 3p25.1 and 22q11.23 by Garnier, Sophie, Harakalova, Magdalena, Weiss, Stefan, Mokry, Michal, Regitz-Zagrosek, Vera, Hengstenberg, Christian, Cappola, Thomas, Isnard, Richard, Arbustini, Eloisa, Cook, Stuart, van Setten, Jessica, Calis, Jorg, Hakonarson, Hakon, Morley, Michael, Stark, Klaus, Prasad, Sanjay, Li, Jin, O'Regan, Declan, Grasso, Maurizia, Müller-Nurasyid, Martina, Meitinger, Thomas, Empana, Jean-Philippe, Strauch, Konstantin, Waldenberger, Melanie, Marguiles, Kenneth, Seidman, Christine, Kararigas, Georgios, Meder, Benjamin, Haas, Jan, Boutouyrie, Pierre, Lacolley, Patrick, Jouven, Xavier, Erdmann, Jeanette, Blankenberg, Stefan, Wichter, Thomas, Ruppert, Volker, Tavazzi, Luigi, Dubourg, Olivier, Roizes, Gérard, Dorent, Richard, de Groote, Pascal, Fauchier, Laurent, Trochu, Jean-Noël, Aupetit, Jean-François, Bilinska, Zofia, Germain, Marine, Völker, Uwe, Hemerich, Daiane, Raji, Ibticem, Bacq-Daian, Delphine, Proust, Carole, Remior, Paloma, Gomez-Bueno, Manuel, Lehnert, Kristin, Maas, Renee, Olaso, Robert, Saripella, Ganapathi Varma, Felix, Stephan, Mcginn, Steven, Duboscq-Bidot, Laëtitia, van Mil, Alain, Besse, Céline, Fontaine, Vincent, Blanché, Hélène, Ader, Flavie, Keating, Brendan, Curjol, Angélique, Boland, Anne, Komajda, Michel, Cambien, François, Deleuze, Jean-François, Dörr, Marcus, Asselbergs, Folkert, Villard, Eric, Trégouët, David-Alexandre, Charron, Philippe

    Published in European heart journal (21-05-2021)
    “…Abstract Aims Our objective was to better understand the genetic bases of dilated cardiomyopathy (DCM), a leading cause of systolic heart failure. Methods and…”
    Get full text
    Journal Article
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    Comparison of Morphological and Genetic Characteristics of Avocados Grown in Tanzania by Juma, Ibrahim, Geleta, Mulatu, Hovmalm, Helena Persson, Nyomora, Agnes, Saripella, Ganapathi Varma, Carlsson, Anders S, Fatih, Moneim, Ortiz, Rodomiro

    Published in Genes (04-01-2021)
    “…Tanzania has been growing avocado for decades. A wide variability of the avocado germplasm has been found, and the crop is largely contributing to the earnings…”
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    Transcriptome Analysis of Potato Infected with the Necrotrophic Pathogen Alternaria solani by Brouwer, Sophie, Brus-Szkalej, Maja, Saripella, Ganapathi, Liang, Dong, Liljeroth, Erland, Grenville-Briggs, Laura

    Published in Plants (Basel) (18-10-2021)
    “…Potato early blight is caused by the necrotrophic fungus Alternaria solani and can result in yield losses of up to 50% if left uncontrolled. At present, the…”
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    Journal Article
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