Search Results - "Sangket, Unitsa"
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1
VOE: automated analysis of variant epitopes of SARS-CoV-2 for the development of diagnostic tests or vaccines for COVID-19
Published in PeerJ (San Francisco, CA) (19-06-2024)“…The development of serodiagnostic tests and vaccines for COVID-19 depends on the identification of epitopes from the SARS-CoV-2 genome. An epitope is the…”
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2
In silico analysis of protein toxin and bacteriocins from Lactobacillus paracasei SD1 genome and available online databases
Published in PloS one (24-08-2017)“…Lactobacillus paracasei SD1 is a potential probiotic strain due to its ability to survive several conditions in human dental cavities. To ascertain its safety…”
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3
Ovarian Transcriptome Analysis of Vitellogenic and Non-Vitellogenic Female Banana Shrimp (Fenneropenaeus merguiensis)
Published in PloS one (14-10-2016)“…The banana shrimp (Fenneropenaeus merguiensis) is one of the most commercially important penaeid species in the world. Its numbers are declining in the wild,…”
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4
DisVar: an R library for identifying variants associated with diseases using large-scale personal genetic information
Published in PeerJ (San Francisco, CA) (28-09-2023)“…Background Genetic variants may potentially play a contributing factor in the development of diseases. Several genetic disease databases are used in medical…”
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bestDEG: a web-based application automatically combines various tools to precisely predict differentially expressed genes (DEGs) from RNA-Seq data
Published in PeerJ (San Francisco, CA) (10-11-2022)“…Differential gene expression analysis using RNA sequencing technology (RNA-Seq) has become the most popular technique in transcriptome research. Although many…”
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6
Diversification of the ant odorant receptor gene family and positive selection on candidate cuticular hydrocarbon receptors
Published in BMC research notes (27-08-2015)“…Chemical communication plays important roles in the social behavior of ants making them one of the most successful groups of animals on earth. However, the…”
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RNA-Seq dataset of thoracic ganglia transcriptome across four ovarian development stages in Fenneropenaeus merguiensis
Published in Data in brief (01-06-2021)“…Banana shrimp (Fenneropenaeus merguiensis) is an economically important shrimp in marine aquaculture. Although there is plenty of transcriptome research for…”
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Diversity of Human Enterovirus Co-Circulations in Five Kindergartens in Bangkok between July 2019 and January 2020
Published in Viruses (01-06-2023)“…Human enterovirus causes various clinical manifestations in the form of rashes, febrile illness, flu-like illness, uveitis, hand-foot-mouth disease (HFMD),…”
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SNPer: an R library for quantitative variant analysis on single nucleotide polymorphisms among influenza virus populations
Published in PloS one (13-04-2015)“…Influenza virus (IFV) can evolve rapidly leading to genetic drifts and shifts resulting in human and animal influenza epidemics and pandemics. The genetic…”
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Journal Article -
10
Integrated Automatic Workflow for Phylogenetic Tree Analysis Using Public Access and Local Web Services
Published in Journal of integrative bioinformatics (01-03-2016)“…At the present, coding sequence (CDS) has been discovered and larger CDS is being revealed frequently. Approaches and related tools have also been developed…”
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ParallABEL: an R library for generalized parallelization of genome-wide association studies
Published in BMC bioinformatics (29-04-2010)“…Genome-Wide Association (GWA) analysis is a powerful method for identifying loci associated with complex traits and drug response. Parts of GWA analyses,…”
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12
Molecular Evolution of the Odorant and Gustatory Receptor Genes in Lepidopteran Insects: Implications for Their Adaptation and Speciation
Published in Journal of molecular evolution (01-08-2014)“…Lepidoptera (comprised of butterflies and moths) is one of the largest groups of insects, including more than 160,000 described species. Chemoreception plays…”
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13
Long non-coding RNA profile in banana shrimp, Fenneropenaeus merguiensis and the potential role of lncPV13 in vitellogenesis
Published in Comparative biochemistry and physiology. Part A, Molecular & integrative physiology (01-11-2021)“…The long non-coding RNAs (lncRNAs) have been known to play important roles in several biological processes as well as in reproduction. This study aimed to…”
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14
Potential receptors in Fenneropenaeus merguiensis ovary and role of saxophone, the bone morphogenetic protein receptor, in ovarian development
Published in Comparative biochemistry and physiology. Part A, Molecular & integrative physiology (01-04-2022)“…Receptors, which play an initial role in signaling pathways in several physiological processes, including reproduction, are among the several molecular factors…”
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15
Transcriptome profiling of gonad-stimulating factors in thoracic ganglia and a potential role of Indian hedgehog gene in vitellogenesis of banana shrimp Fenneropenaeus merguiensis
Published in Comparative biochemistry and physiology. Part D, Genomics & proteomics (01-09-2023)“…Shrimp reproduction is controlled by several factors. Central nervous tissues, especially thoracic ganglia and brain, are known sources of gonad stimulating…”
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Journal Article -
16
Integrated Automatic Workflow for Phylogenetic Tree Analysis Using Public Access and Local Web Services
Published in Journal of integrative bioinformatics (28-11-2016)“…At the present, coding sequence (CDS) has been discovered and larger CDS is being revealed frequently. Approaches and related tools have also been developed…”
Get full text
Journal Article -
17
SNPer: An R Library for Quantitative Variant Analysis on Single Nucleotide Polymorphisms among Influenza Virus Populations: e0122812
Published in PloS one (01-04-2015)“…Influenza virus (IFV) can evolve rapidly leading to genetic drifts and shifts resulting in human and animal influenza epidemics and pandemics. The genetic…”
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Journal Article -
18
Automatic synchronization and distribution of biological databases and software over low-bandwidth networks among developing countries
Published in Bioinformatics (15-01-2008)“…Bioinformatics involves the collection, organization and analysis of large amounts of biological data, using networks of computers and databases. Developing…”
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19
An efficient process for enhancing genotype imputation in Genome-wide association studies using high performance computing
Published in 2015 International Computer Science and Engineering Conference (ICSEC) (01-11-2015)“…Genotype imputation based analysis usually consumes computational and data intensive. This paper presents a practical and efficient process for enhancing the…”
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Conference Proceeding -
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Linguistic Knowledge Extraction from Neural Networks Using Maximum Weight and Frequency Data Representation
Published in 2006 IEEE Conference on Cybernetics and Intelligent Systems (01-06-2006)“…This paper presents a method of linguistic rule extraction from neural networks nodes pruning using frequency interval data representation. The method composes…”
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Conference Proceeding