Search Results - "Sahoo, Arpan"
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1
Reference-free cell type deconvolution of multi-cellular pixel-resolution spatially resolved transcriptomics data
Published in Nature communications (29-04-2022)“…Recent technological advancements have enabled spatially resolved transcriptomic profiling but at multi-cellular pixel resolution, thereby hindering the…”
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Journal Article -
2
Nanoparticle-based targeting of microglia improves the neural regeneration enhancing effects of immunosuppression in the zebrafish retina
Published in Communications biology (18-05-2023)“…Retinal Müller glia function as injury-induced stem-like cells in zebrafish but not mammals. However, insights gleaned from zebrafish have been applied to…”
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Journal Article -
3
Downregulation of Nodal inhibits metastatic progression in retinoblastoma
Published in Acta neuropathologica communications (26-08-2019)“…Retinoblastoma is the most common intraocular malignancy in children. We previously found that the ACVR1C/SMAD2 pathway is significantly upregulated in…”
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4
VeloViz: RNA velocity-informed embeddings for visualizing cellular trajectories
Published in Bioinformatics (03-01-2022)“…Abstract Motivation Single-cell transcriptomics profiling technologies enable genome-wide gene expression measurements in individual cells but can currently…”
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Journal Article -
5
Survival Distinctions for Cases Representing Immunologically Cold Tumors via Intrinsic Disorder Assessments for Blood-Sourced TRB Variable Regions
Published in International journal of molecular sciences (01-11-2024)“…T cell receptor beta (TRB) sequences were recovered from the Cancer Genome Atlas Uveal Melanoma blood exome files. Intrinsic disorder scores for amino acid…”
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6
Blood-based T cell receptor anti-viral CDR3s are associated with worse overall survival for neuroblastoma
Published in Journal of cancer research and clinical oncology (01-10-2023)“…With the advent of large collections of adaptive immune receptor recombination reads representing cancer, there is the opportunity to further investigate the…”
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Journal Article -
7
Stratification of Wilms tumor patients using physicochemical properties of the adaptive immune receptor polypeptides, IGL and TRG
Published in Journal of pediatric urology (10-10-2024)“…Wilms tumor (WT) is the most common pediatric renal malignancy. Current guidelines that stratify WT risk and determine treatment courses are inadequate, as…”
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Socratic Artificial Intelligence Learning (SAIL): The Role of a Virtual Voice Assistant in Learning Orthopedic Knowledge
Published in Journal of surgical education (01-11-2024)“…•The role of chatbots (smart speaker technology) in education is unclear.•We created a custom smart-speaker interface, SAIL.•SAIL helped orthopedic trainees…”
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9
Adaptive Immune Receptor Distinctions Along the Colorectal Polyp-Tumor Timelapse
Published in Clinical colorectal cancer (26-07-2024)“…Colorectal cancer (CRC) is the third-most common cancer diagnosed worldwide, with 1.85 million new cases per year. While mortality has significantly decreased…”
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Journal Article -
10
Use of Fitbit Technology Does Not Impact Health Biometrics in a Community of Older Adults
Published in Telemedicine journal and e-health (01-04-2021)“…To evaluate if the offering of Fitbit technology led to changes in cardiovascular health metrics in a cohort of older adults. A retrospective cohort study was…”
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Journal Article -
11
Axisymmetric Indentation of Elastic Membranes
Published 01-01-2019“…Study of elastic membranes are important for several physical applications ranging from deformed shapes of tents and inflatable structures to germination of…”
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Dissertation