Search Results - "SZITENBERG, Amir"

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  1. 1

    Dissecting the factors shaping fish skin microbiomes in a heterogeneous inland water system by Krotman, Yaron, Yergaliyev, Timur M, Alexander Shani, Rivka, Avrahami, Yosef, Szitenberg, Amir

    Published in Microbiome (31-01-2020)
    “…Fish skin microbiomes are rarely studied in inland water systems, in spite of their importance for fish health and ecology. This is mainly because fish species…”
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    Journal Article
  2. 2

    Temporal and spatial variation in distribution of fish environmental DNA in England’s largest lake by Lawson Handley, Lori, Read, Daniel S., Winfield, Ian J., Kimbell, Helen, Johnson, Harriet, Li, Jianlong, Hahn, Christoph, Blackman, Rosetta, Wilcox, Rose, Donnelly, Rob, Szitenberg, Amir, Hänfling, Bernd

    Published in Environmental DNA (Hoboken, N.J.) (01-05-2019)
    “…Environmental DNA offers great potential as a biodiversity monitoring tool. Previous work has demonstrated that eDNA metabarcoding provides reliable…”
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  3. 3

    Comparative Genomics of Apomictic Root-Knot Nematodes: Hybridization, Ploidy, and Dynamic Genome Change by Szitenberg, Amir, Salazar-Jaramillo, Laura, Blok, Vivian C, Laetsch, Dominik R, Joseph, Soumi, Williamson, Valerie M, Blaxter, Mark L, Lunt, David H

    Published in Genome biology and evolution (01-10-2017)
    “…The root-knot nematodes (genus Meloidogyne) are important plant parasites causing substantial agricultural losses. The Meloidogyne incognita group (MIG) of…”
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    Skin Microbiome Compositional Changes in Atopic Dermatitis Accompany Dead Sea Climatotherapy by Brandwein, Michael, Fuks, Garold, Israel, Avigail, Sabbah, Fareed, Hodak, Emmilia, Szitenberg, Amir, Harari, Marco, Steinberg, Droron, Bentwich, Zvi, Shental, Noam, Meshner, Shiri

    Published in Photochemistry and photobiology (01-11-2019)
    “…Dead Sea climatotherapy (DSC) is a well‐established therapeutic modality for the treatment of several diseases, including atopic dermatitis. Skin microbiome…”
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  6. 6

    Bacterial Community Structure Dynamics in Meloidogyne incognita-Infected Roots and Its Role in Worm-Microbiome Interactions by Yergaliyev, Timur M., Alexander-Shani, Rivka, Dimerets, Hana, Pivonia, Shimon, Bird, David McK, Rachmilevitch, Shimon, Szitenberg, Amir

    Published in mSphere (15-07-2020)
    “…Plant parasitic nematodes such as Meloidogyne incognita have a complex life cycle, occurring sequentially in various niches of the root and rhizosphere. They…”
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  7. 7

    Teasing apart the host-related, nutrient-related and temperature-related effects shaping the phenology and microbiome of the tropical seagrass Halophila stipulacea by Szitenberg, Amir, Beca-Carretero, Pedro, Azcárate-García, Tomás, Yergaliyev, Timur, Alexander-Shani, Rivka, Winters, Gidon

    Published in Environmental microbiome (15-04-2022)
    “…Halophila stipulacea seagrass meadows are an ecologically important and threatened component of the ecosystem in the Gulf of Aqaba. Recent studies have…”
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  8. 8

    ReproPhylo: An Environment for Reproducible Phylogenomics by Szitenberg, Amir, John, Max, Blaxter, Mark L, Lunt, David H

    Published in PLoS computational biology (01-09-2015)
    “…The reproducibility of experiments is key to the scientific process, and particularly necessary for accurate reporting of analyses in data-rich fields such as…”
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  9. 9

    Diversity of sponge mitochondrial introns revealed by cox 1 sequences of Tetillidae by Szitenberg, Amir, Rot, Chagai, Ilan, Micha, Huchon, Dorothée

    Published in BMC evolutionary biology (20-09-2010)
    “…Animal mitochondrial introns are rare. In sponges and cnidarians they have been found in the cox 1 gene of some spirophorid and homosclerophorid sponges, as…”
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  10. 10

    The evolution of tyrosine-recombinase elements in Nematoda by Szitenberg, Amir, Koutsovoulos, Georgios, Blaxter, Mark L, Lunt, David H

    Published in PloS one (08-09-2014)
    “…Transposable elements can be categorised into DNA and RNA elements based on their mechanism of transposition. Tyrosine recombinase elements (YREs) are…”
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  11. 11

    Eukaryotic Adaptation to Years-Long Starvation Resembles that of Bacteria by Aouizerat, Tzemach, Gelman, Daniel, Szitenberg, Amir, Gutman, Itay, Glazer, Shunit, Reich, Eli, Schoemann, Miriam, Kaplan, Rachel, Saragovi, Amijai, Hazan, Ronen, Klutstein, Michael

    Published in iScience (27-09-2019)
    “…The Growth Advantage in Stationary Phase (GASP) phenomenon, described in bacteria, reflects the genetic adaptation of bacteria to stress, including starvation,…”
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  12. 12

    Isolation and Characterization of Live Yeast Cells from Ancient Clay Vessels by Aouizerat, Tzemach, Maeir, Aren M, Paz, Yitzhak, Gadot, Yuval, Szitenberg, Amir, Alkalay-Oren, Sivan, Coppenhagen-Glazer, Shunit, Klutstein, Michael, Hazan, Ronen

    Published in Bio-protocol (05-01-2020)
    “…Ancient fermented food has been studied mainly based on residue analysis and recipes and reconstruction attempts were performed using modern domesticated…”
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  13. 13

    Mitochondrial and morphological variation of Tilapia zillii in Israel by Szitenberg, Amir, Goren, Menachem, Huchon, Dorothée

    Published in BMC research notes (02-04-2012)
    “…Tilapia zillii is widespread in the East Levant inland aquatic systems as well as in artificial water reservoirs. In this study we explore the genetic and…”
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  14. 14

    Diversity of sponge mitochondrial introns revealed by cox 1sequences of Tetillidae by Szitenberg, Amir, Rot, Chagai, Ilan, Micha, Huchon, Dorothée

    Published in BMC evolutionary biology (20-09-2010)
    “…Background Animal mitochondrial introns are rare. In sponges and cnidarians they have been found in the cox 1 gene of some spirophorid and homosclerophorid…”
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    Journal Article
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    Patch-scale to hillslope-scale geodiversity alleviates susceptibility of dryland ecosystems to climate change: insights from the Israeli Negev by Stavi, Ilan, Yizhaq, Hezi, Szitenberg, Amir, Zaady, Eli

    “…Notes: In homogeneous hillslopes, the thick soil layer enables shrubby and herbaceous vegetation to develop deep root systems, which compete for water…”
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    A matter of choice: Understanding the interactions between epiphytic foraminifera and their seagrass host Halophila stipulacea by Masawa, Jenipher, Winters, Gidon, Kaminer, Moran, Szitenberg, Amir, Gruntman, Michal, Ashckenazi-Polivoda, Sarit

    Published in Marine environmental research (01-04-2024)
    “…In sub/tropical waters, benthic foraminifera are among the most abundant epiphytic organisms inhabiting seagrass meadows. This study explored the nature of the…”
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  17. 17

    Widespread prevalence but contrasting patterns of intragenomic rRNA polymorphisms in nematodes: Implications for phylogeny, species delimitation and life history inference by Qing, Xue, Bik, Holly, Yergaliyev, Timur M., Gu, Jianfeng, Fonderie, Pamela, Brown‐Miyara, Sigal, Szitenberg, Amir, Bert, Wim

    Published in Molecular ecology resources (01-01-2020)
    “…Ribosomal RNA genes have long been a favoured locus in phylogenetic and metabarcoding studies. Within a genome, rRNA loci are organized as tandem repeated…”
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  18. 18

    Genetic Drift, Not Life History or RNAi, Determine Long-Term Evolution of Transposable Elements by Szitenberg, Amir, Cha, Soyeon, Opperman, Charles H, Bird, David M, Blaxter, Mark L, Lunt, David H

    Published in Genome biology and evolution (01-09-2016)
    “…Transposable elements (TEs) are a major source of genome variation across the branches of life. Although TEs may play an adaptive role in their host's genome,…”
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  19. 19

    Mitochondrial group I and group II introns in the sponge orders Agelasida and Axinellida by Huchon, Dorothée, Szitenberg, Amir, Shefer, Sigal, Ilan, Micha, Feldstein, Tamar

    Published in BMC evolutionary biology (12-12-2015)
    “…Self-splicing introns are present in the mitochondria of members of most eukaryotic lineages. They are divided into Group I and Group II introns, according to…”
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