Search Results - "SIERACKI, MICHAEL E."

The others: our biased perspective of eukaryotic genomes by del Campo, Javier, Sieracki, Michael E., Molestina, Robert, Keeling, Patrick, Massana, Ramon, Ruiz-Trillo, Iñaki

“…•There is an important bias in eukaryotic knowledge, affecting cultures and genomes.•Eukaryotic genomics are biased towards multicellular organisms and their…”
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Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles by Massana, Ramon, del Campo, Javier, Sieracki, Michael E, Audic, Stéphane, Logares, Ramiro

“…Molecular surveys in planktonic marine systems have unveiled a large novel diversity of small protists. A large part of this diversity belongs to basal…”
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Assembling the marine metagenome, one cell at a time by Woyke, Tanja, Xie, Gary, Copeland, Alex, González, José M, Han, Cliff, Kiss, Hajnalka, Saw, Jimmy H, Senin, Pavel, Yang, Chi, Chatterji, Sourav, Cheng, Jan-Fang, Eisen, Jonathan A, Sieracki, Michael E, Stepanauskas, Ramunas

“…The difficulty associated with the cultivation of most microorganisms and the complexity of natural microbial assemblages, such as marine plankton or human…”
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Matching phylogeny and metabolism in the uncultured marine bacteria, one cell at a time by Stepanauskas, Ramunas, Sieracki, Michael E

“…The identification of predominant microbial taxa with specific metabolic capabilities remains one the biggest challenges in environmental microbiology, because…”
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Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean by Swan, Brandon K., Martinez-Garcia, Manuel, Preston, Christina M., Sczyrba, Alexander, Woyke, Tanja, Lamy, Dominique, Reinthaler, Thomas, Poulton, Nicole J., Masland, E. Dashiell P., Gomez, Monica Lluesma, Sieracki, Michael E., DeLong, Edward F., Herndl, Gerhard J., Stepanauskas, Ramunas

“…Recent studies suggest that unidentified prokaryotes fix inorganic carbon at globally significant rates in the immense dark ocean. Using single-cell sorting…”
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Single-Cell Genomics Reveals Organismal Interactions in Uncultivated Marine Protists by Yoon, Hwan Su, Price, Dana C., Stepanauskas, Ramunas, Rajah, Veeran D., Sieracki, Michael E., Wilson, William H., Yang, Eun Chan, Duffy, Siobain, Bhattacharya, Debashish

“…Whole-genome shotgun sequence data from three individual cells isolated from seawater, followed by analysis of ribosomal DNA, indicated that the cells…”
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High-throughput single-cell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton by Martinez-Garcia, Manuel, Swan, Brandon K, Poulton, Nicole J, Gomez, Monica Lluesma, Masland, Dashiell, Sieracki, Michael E, Stepanauskas, Ramunas

“…Recent discoveries suggest that photoheterotrophs (rhodopsin-containing bacteria (RBs) and aerobic anoxygenic phototrophs (AAPs)) and chemoautotrophs may be…”
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Comparative genomics reveals new functional insights in uncultured MAST species by Labarre, Aurelie, López-Escardó, David, Latorre, Francisco, Leonard, Guy, Bucchini, François, Obiol, Aleix, Cruaud, Corinne, Sieracki, Michael E., Jaillon, Olivier, Wincker, Patrick, Vandepoele, Klaas, Logares, Ramiro, Massana, Ramon

“…Heterotrophic lineages of stramenopiles exhibit enormous diversity in morphology, lifestyle, and habitat. Among them, the marine stramenopiles (MASTs)…”
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Single Cell Genomics Reveals Viruses Consumed by Marine Protists by Brown, Julia M, Labonté, Jessica M, Brown, Joseph, Record, Nicholas R, Poulton, Nicole J, Sieracki, Michael E, Logares, Ramiro, Stepanauskas, Ramunas

“…The predominant model of the role of viruses in the marine trophic web is that of the "viral shunt," where viral infection funnels a substantial fraction of…”
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Accessing the genomic information of unculturable oceanic picoeukaryotes by combining multiple single cells by Mangot, Jean-François, Logares, Ramiro, Sánchez, Pablo, Latorre, Fran, Seeleuthner, Yoann, Mondy, Samuel, Sieracki, Michael E., Jaillon, Olivier, Wincker, Patrick, Vargas, Colomban de, Massana, Ramon

“…Pico-sized eukaryotes play key roles in the functioning of marine ecosystems, but we still have a limited knowledge on their ecology and evolution. The MAST-4…”
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Unveiling in situ interactions between marine protists and bacteria through single cell sequencing by Martinez-Garcia, Manuel, Brazel, David, Poulton, Nicole J, Swan, Brandon K, Gomez, Monica Lluesma, Masland, Dashiell, Sieracki, Michael E, Stepanauskas, Ramunas

“…Heterotrophic protists are a highly diverse and biogeochemically significant component of marine ecosystems, yet little is known about their species-specific…”
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Capturing diversity of marine heterotrophic protists: one cell at a time by Heywood, Jane L, Sieracki, Michael E, Bellows, Wendy, Poulton, Nicole J, Stepanauskas, Ramunas

“…Recent applications of culture-independent, molecular methods have revealed unexpectedly high diversity in a variety of functional and phylogenetic groups of…”
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Taming the smallest predators of the oceans by del Campo, Javier, Not, Fabrice, Forn, Irene, Sieracki, Michael E, Massana, Ramon

“…Protists (unicellular eukaryotes) arguably account for most eukaryotic diversity and are central players of the biosphere. Known protist diversity and biology…”
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Phylogenetic Diversity and Specificity of Bacteria Closely Associated with Alexandrium spp. and Other Phytoplankton by Jasti, Suresh, Sieracki, Michael E, Poulton, Nicole J, Giewat, Michael W, Rooney-Varga, Juliette N

“…While several studies have suggested that bacterium-phytoplankton interactions have the potential to dramatically influence harmful algal bloom dynamics,…”
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Exploring Microdiversity in Novel Kordia sp. (Bacteroidetes) with Proteorhodopsin from the Tropical Indian Ocean via Single Amplified Genomes by Royo-Llonch, Marta, Ferrera, Isabel, Cornejo-Castillo, Francisco M, Sánchez, Pablo, Salazar, Guillem, Stepanauskas, Ramunas, González, José M, Sieracki, Michael E, Speich, Sabrina, Stemmann, Lars, Pedrós-Alió, Carlos, Acinas, Silvia G

“…Marine Bacteroidetes constitute a very abundant bacterioplankton group in the oceans that plays a key role in recycling particulate organic matter and includes…”
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Distribution of Planktonic Aerobic Anoxygenic Photoheterotrophic Bacteria in the Northwest Atlantic by Sieracki, Michael E., Ilana C. Gilg, Edward C. Thier, Nicole J. Poulton, Goericke, Ralf

“…Aerobic anoxygenic photoheterotrophic (AAP) bacteria can use both dissolved organic matter and light for energy production, but their photosynthesis does not…”
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Targeted sorting of single virus-infected cells of the coccolithophore Emiliania huxleyi by Martínez Martínez, Joaquín, Poulton, Nicole J, Stepanauskas, Ramunas, Sieracki, Michael E, Wilson, William H

“…Discriminating infected from healthy cells is the first step to understanding the mechanisms and ecological implications of viral infection. We have developed…”
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Planktonic microbes in the Gulf of Maine area by Li, William K W, Andersen, Robert A, Gifford, Dian J, Incze, Lewis S, Martin, Jennifer L, Pilskaln, Cynthia H, Rooney-Varga, Juliette N, Sieracki, Michael E, Wilson, William H, Wolff, Nicholas H

“…In the Gulf of Maine area (GoMA), as elsewhere in the ocean, the organisms of greatest numerical abundance are microbes. Viruses in GoMA are largely…”
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Reconstruction of protein domain evolution using single-cell amplified genomes of uncultured choanoflagellates sheds light on the origin of animals by López-Escardó, David, Grau-Bové, Xavier, Guillaumet-Adkins, Amy, Gut, Marta, Sieracki, Michael E, Ruiz-Trillo, Iñaki

“…Understanding the origins of animal multicellularity is a fundamental biological question. Recent genome data have unravelled the role that co-option of…”
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Nitrogen and silicon limitation of phytoplankton communities across an urban estuary: The East River-Long Island Sound system by Gobler, Christopher J., Buck, Nathan J., Sieracki, Michael E., Sañudo-Wilhelmy, Sergio A.

“…To understand how nutrient loading may impact phytoplankton community growth, structure, and photosynthetic efficiency in Long Island Sound (LIS), nutrient…”
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