Search Results - "SHUANGGE MA"

A Selective Review of Group Selection in High-Dimensional Models by Huang, Jian, Breheny, Patrick, Ma, Shuangge

“…Grouping structures arise naturally in many statistical modeling problems. Several methods have been proposed for variable selection that respect grouping…”
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ZINBMM: a general mixture model for simultaneous clustering and gene selection using single-cell transcriptomic data by Li, Yang, Wu, Mingcong, Ma, Shuangge, Wu, Mengyun

“…Abstract Clustering is a critical component of single-cell RNA sequencing (scRNA-seq) data analysis and can help reveal cell types and infer cell lineages…”
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Asymptotic Properties of Bridge Estimators in Sparse High-Dimensional Regression Models by Huang, Jian, Horowitz, Joel L., Ma, Shuangge

“…We study the asymptotic properties of bridge estimators in sparse, high-dimensional, linear regression models when the number of covariates may increase to…”
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A Selective Review of Multi-Level Omics Data Integration Using Variable Selection by Wu, Cen, Zhou, Fei, Ren, Jie, Li, Xiaoxi, Jiang, Yu, Ma, Shuangge

“…High-throughput technologies have been used to generate a large amount of omics data. In the past, single-level analysis has been extensively conducted where…”
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Thyroid-Stimulating Hormone, Thyroid Hormones, and Risk of Papillary Thyroid Cancer: A Nested Case-Control Study by Huang, Huang, Rusiecki, Jennifer, Zhao, Nan, Chen, Yingtai, Ma, Shuangge, Yu, Herbert, Ward, Mary H, Udelsman, Robert, Zhang, Yawei

“…The effects of thyroid-stimulating hormone (TSH) and thyroid hormones on the development of human papillary thyroid cancer (PTC) remain poorly understood. The…”
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Birth weight reference percentiles for Chinese by Dai, Li, Deng, Changfei, Li, Yanhua, Zhu, Jun, Mu, Yi, Deng, Ying, Mao, Meng, Wang, Yanping, Li, Qi, Ma, Shuangge, Ma, Xiaomei, Zhang, Yawei

“…To develop a reference of population-based gestational age-specific birth weight percentiles for contemporary Chinese. Birth weight data was collected by the…”
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Exome sequencing identifies recurrent mutations in NF1 and RASopathy genes in sun-exposed melanomas by Krauthammer, Michael, Kong, Yong, Bacchiocchi, Antonella, Evans, Perry, Pornputtapong, Natapol, Wu, Cen, McCusker, Jamie P, Ma, Shuangge, Cheng, Elaine, Straub, Robert, Serin, Merdan, Bosenberg, Marcus, Ariyan, Stephan, Narayan, Deepak, Sznol, Mario, Kluger, Harriet M, Mane, Shrikant, Schlessinger, Joseph, Lifton, Richard P, Halaban, Ruth

“…Ruth Halaban, Michael Krauthammer and colleagues report exome sequencing of 213 melanomas and identify a distinct co-mutation pattern of NF1 with known…”
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Promoting sign consistency in the cure model estimation and selection by Shi, Xingjie, Ma, Shuangge, Huang, Yuan

“…In survival analysis, when a subset of subjects has extremely long survival, the two-part cure rate model has been commonly adopted. In the two-part model, the…”
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Principal component analysis based methods in bioinformatics studies by Ma, Shuangge, Dai, Ying

“…In analysis of bioinformatics data, a unique challenge arises from the high dimensionality of measurements. Without loss of generality, we use genomic study…”
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Racial differences in testicular cancer in the United States: descriptive epidemiology by Li, Yang, Lu, Qi, Wang, Yu, Ma, Shuangge

“…Testicular cancer (TC) is the most common malignancy in young adult men, and in many countries the incidence rates of testicular cancer have been increasing…”
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Life Expectancy after Myocardial Infarction, According to Hospital Performance by Bucholz, Emily M, Butala, Neel M, Ma, Shuangge, Normand, Sharon-Lise T, Krumholz, Harlan M

“…In an analysis of more than 119,000 patients with acute MI admitted to over 1800 hospitals, patients treated in high-performing hospitals (with low 30-day…”
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Prediction Consistency Regularization for Learning with Noise Labels Based on Contrastive Clustering by Sun, Xinkai, Zhang, Sanguo, Ma, Shuangge

“…In the classification task, label noise has a significant impact on models' performance, primarily manifested in the disruption of prediction consistency,…”
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Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma by Krauthammer, Michael, Kong, Yong, Ha, Byung Hak, Evans, Perry, Bacchiocchi, Antonella, McCusker, Jamie P, Cheng, Elaine, Davis, Matthew J, Goh, Gerald, Choi, Murim, Ariyan, Stephan, Narayan, Deepak, Dutton-Regester, Ken, Capatana, Ana, Holman, Edna C, Bosenberg, Marcus, Sznol, Mario, Kluger, Harriet M, Brash, Douglas E, Stern, David F, Materin, Miguel A, Lo, Roger S, Mane, Shrikant, Ma, Shuangge, Kidd, Kenneth K, Hayward, Nicholas K, Lifton, Richard P, Schlessinger, Joseph, Boggon, Titus J, Halaban, Ruth

“…Ruth Halaban and colleagues report exome sequences of 147 melanoma tumors. They identified a recurrent somatic activating alteration in the Rho GTPase RAC1 in…”
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Vertical integration methods for gene expression data analysis by Wu, Mengyun, Yi, Huangdi, Ma, Shuangge

“…Gene expression data have played an essential role in many biomedical studies. When the number of genes is large and sample size is limited, there is a 'lack…”
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CTHRC1+ fibroblasts and SPP1+ macrophages synergistically contribute to pro-tumorigenic tumor microenvironment in pancreatic ductal adenocarcinoma by Li, Evan, Cheung, Hoi Ching (Zoey), Ma, Shuangge

“…Pancreatic ductal adenocarcinoma (PDAC) is an extremely lethal cancer that accounts for over 90% of all pancreatic cancer cases. With a 5-year survival rate of…”
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Histopathological imaging features- versus molecular measurements-based cancer prognosis modeling by Zhang, Sanguo, Fan, Yu, Zhong, Tingyan, Ma, Shuangge

“…For lung and many other cancers, prognosis is essentially important, and extensive modeling has been carried out. Cancer is a genetic disease. In the past…”
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Penalized feature selection and classification in bioinformatics by Ma, Shuangge, Huang, Jian

“…In bioinformatics studies, supervised classification with high-dimensional input variables is frequently encountered. Examples routinely arise in genomic,…”
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Associations of physical activity and screen time with suboptimal health status and sleep quality among Chinese college freshmen: A cross-sectional study by Ma, Chenjin, Zhou, Long, Xu, Wangli, Ma, Shuangge, Wang, Yu

“…This study aimed to investigate the associations of physical activity (PA) and screen time (ST) with physiological, psychological, and social…”
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Supervised group Lasso with applications to microarray data analysis by Ma, Shuangge, Song, Xiao, Huang, Jian

“…A tremendous amount of efforts have been devoted to identifying genes for diagnosis and prognosis of diseases using microarray gene expression data. It has…”
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Racial differences in three major NHL subtypes: Descriptive epidemiology by Li, Yang, Wang, Yu, Wang, Zhuoyue, Yi, Danhui, Ma, Shuangge

“…Highlights • The three largest NHL subtypes are DLBCL, FL, and CLL/SLL. • There are racial differences in terms of patients’ characteristics, incidence, and…”
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