Search Results - "SHIDA, Toshio"

AP site recognition mechanism by the tryptophan residue in the vicinity of the catalytic center of AP endonucleases by Shida, Toshio

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CD81 and CD9 work independently as extracellular components upon fusion of sperm and oocyte by Ohnami, Naoko, Nakamura, Akihiro, Miyado, Mami, Sato, Masahiro, Kawano, Natsuko, Yoshida, Keiichi, Harada, Yuichirou, Takezawa, Youki, Kanai, Seiya, Ono, Chihiro, Takahashi, Yuji, Kimura, Ken, Shida, Toshio, Miyado, Kenji, Umezawa, Akihiro

“…When a sperm and oocyte unite into one cell upon fertilization, membranous fusion between the sperm and oocyte occurs. In mice, Izumo1 and a tetraspanin…”
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Mutational Analysis of Catalytic Sites of the Cell Wall Lytic N-Acetylmuramoyl-l-alanine Amidases CwlC and CwlV by Shida, T, Hattori, H, Ise, F, Sekiguchi, J

“…The Bacillus subtilis CwlC and the Bacillus polymyxa var. colistinus CwlV are the cell wall lytic N -acetylmuramoyl- l -alanine amidases in the CwlB (LytC)…”
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Identification and Characterization of Novel Cell Wall Hydrolase CwlT by Fukushima, Tatsuya, Kitajima, Toshihiko, Yamaguchi, Hiroyuki, Ouyang, Qin, Furuhata, Kazumi, Yamamoto, Hiroki, Shida, Toshio, Sekiguchi, Junichi

“…A cell wall hydrolase homologue, Bacillus subtilis YddH (renamed CwlT), was determined to be a novel cell wall lytic enzyme. The cwlT gene is located in the…”
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Characterization of the AP endonucleases from Thermoplasma volcanium and Lactobacillus plantarum: Contributions of two important tryptophan residues to AP site recognition by Kaneda, K.(Shinshu Univ., Ueda, Nagano (Japan). Faculty of Textile Science), Ohishi, K, Sekiguchi, J, Shida, T

“…Escherichia coli AP endonuclease (ExoIII) and its human homolog (APE1) have the sole tryptophan residue for AP site recognition (AP site recognizer) but these…”
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Production of Long-chain Levan by a sacC Insertional Mutant from Bacillus subtilis 327UH by SHIDA, Toshio, MUKAIJO, Kohsuke, ISHIKAWA, Shu, YAMAMOTO, Hiroki, SEKIGUCHI, Junichi

“…A hyper extracellular protein producer, Bacillus subtilis 327UH, produced large amounts of levan in a medium containing 20% sucrose, and the yield of levan…”
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Characterization of Bacillus subtilis ExoA protein: A multifunctional DNA-repair enzyme similar to the Escherichia coli exonuclease III by Shida, T. (Shinshu Univ., Ueda, Nagano (Japan). Faculty of Textile Science), Ogawa, T, Ogasawara, N, Sekiguchi, J

“…To discover the physiological role of the Bacillus subtilis ExoA protein, which is similar in amino acid sequence to Escherichia coli exonuclease III, an…”
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Analysis of Substrate Specificity of the RuvC Holliday Junction Resolvase with Synthetic Holliday Junctions by Shida, T, Iwasaki, H, Saito, A, Kyogoku, Y, Shinagawa, H

“…The Escherichia coli RuvC protein endonucleolytically resolves Holliday junctions, which are formed as intermediates during genetic recombination and…”
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Overexpression, purification, and characterization of Bacillus subtilis N-acetylmuramoyl-L-alanine amidase CwlC by Shida, T. (Shinshu Univ., Ueda, Nagano (Japan). Faculty of Textile Science), Hattori, H, Ise, F, Sekiguchi, J

“…N-acetylmuramoyl-L-alanine amidase CwlC of Bacillus subtilis was overproduced in Escherichia coli and purified 21-fold. The amidase hydrolyzed type A cell…”
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Accumulation of a recombinant Aspergillus oryzae lipase artificially localized on the Bacillus subtilis cell surface by Kobayashi, Gota, Toida, Jinichi, Akamatsu, Takashi, Yamamoto, Hiroki, Shida, Toshio, Sekiguchi, Junichi

“…cutL cDNA encoding an extracellular lipase, L1, from Aspergillus oryzae was fused to the cell wall-binding domain (CWB) region of a plasmid, pHCB3R…”
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Identification and Characterization of Novel Cell Wall Hydrolase CwlT: A TWO-DOMAIN AUTOLYSIN EXHIBITING N-ACETYLMURAMIDASE AND DL-ENDOPEPTIDASE ACTIVITIES by Fukushima, Tatsuya, Kitajima, Toshihiko, Yamaguchi, Hiroyuki, Ouyang, Qin, Furuhata, Kazumi, Yamamoto, Hiroki, Shida, Toshio, Sekiguchi, Junichi

“…A cell wall hydrolase homologue, Bacillus subtilis YddH (renamed CwlT), was determined to be a novel cell wall lytic enzyme. The cwlT gene is located in the…”
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Characterization and Comparison of Synthetic Immobile and Mobile Holliday Junctions by Shida, Toshio, Iwasaki, Hiroshi, Shinagawa, Hideo, Kyogoku, Yoshimasa

“…Eight synthetic Holliday junction (HJ) oligonucleotides containing an immobile or a mobile junction were characterized by gel electrophoresis, ultraviolet…”
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Role of the tryptophan residue in the vicinity of the catalytic center of exonuclease III family AP endonucleases: AP site recognition mechanism by Kaneda, Kohichi, Sekiguchi, Junichi, Shida, Toshio

“…The mechanisms by which AP endonucleases recognize AP sites have not yet been determined. Based on our previous study with Escherichia coli exonuclease III…”
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Chemical Synthesis and Properties of an Oligodeoxyribonucleotide Containing a 2-Deoxyribosylformamide Residue by SHIDA, Toshio, IWAORI, Hisaya, ARAKAWA, Masahiko, SEKIGUCHI, Junichi

“…To elucidate the conformational properties of DNA with a 2-deoxyribosylformamide residue (dF), an oligodeoxyribonucleotide containing this abasic residue in a…”
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Solution Structure of the Peptidoglycan Binding Domain of Bacillus subtilis Cell Wall Lytic Enzyme CwlC:  Characterization of the Sporulation-Related Repeats by NMR by Mishima, Masaki, Shida, Toshio, Yabuki, Kazuto, Kato, Ken-ichi, Sekiguchi, Junichi, Kojima, Chojiro

“…Bacillus subtilis CwlC is a cell wall lytic N-acetylmuramoyl-l-alanine amidase that plays an important role in mother-cell lysis during sporulation. The enzyme…”
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Self-Association of Telomeric Short Oligodeoxyribonucleotides Containing a dG Cluster by SHIDA, Toshio, YOKOYAMA, Kohji, TAMAI, Satoshi, SEKIGUCHI, Junichi

“…Oligonucleotides containing a dG cluster, d(TmGnTm), are models of single-stranded parts of telomeric deoxyribonucleic acid and substitutes for poly(dG)…”
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Characterization of the AP Endonucleases from Thermoplasma volcanium and Lactobacillus plantarum by KANEDA, Kohichi, OHISHI, Kaori, SEKIGUCHI, Junichi, SHIDA, Toshio

“…Escherichia coli AP endonuclease (ExoIII) and its human homolog (APE1) have the sole tryptophan residue for AP site recognition (AP site recognizer) but these…”
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Polynucleotides. LXIII. Solution Conformation of Oligodeoxyribonucleotides containing an Alternating dC-dG Sequence which can form a Left-handed Double Helix by UESUGI, SEIICHI, SHIDA, TOSHIO, IKEHARA, MORIO

“…To elucidate the conformational properties and their chain length dependency in solution of oligodeoxyribonucleotides containing an alternating C-G sequence,…”
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Incipient complex formation between AP endonucleases and DNA containing AP site: A vital role of the tryptophan residue by Yamada, Yasunori, Kodera, Takuya, Ohishi, Kaori, Kaneda, Kohichi, Shida, Toshio

“…Abstract To elucidate whether the tryptophan residues in the vicinity of the catalytic site are involved in AP site recognition and are critical for AP…”
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Cleavage of Single- and Double-Stranded DNAs Containing an Abasic Residue by Escherichia Coli Exonuclease III (AP Endonuclease VI) by Shida, Toshio, Noda, Mitsuhiro, Sekiguchi, Junichi

“…The Escherichia coli exonuclease III (AP endonuclease VI) is a DNA-repair enzyme that hydrolyzes the phosphodiester bond 5′ to an abasic site in DNA. To study…”
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