Search Results - "SHAHID, Muhammad Qasim"
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Production Assessment and Genome Comparison Revealed High Yield Potential and Novel Specific Alleles Associated with Fertility and Yield in Neo-Tetraploid Rice
Published in Rice (New York, N.Y.) (03-06-2020)“…Background Neo-tetraploid rice (NTR) is a new tetraploid rice germplasm that developed from the crossing and directional selection of different autotetraploid…”
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Genomics Analyses Reveal Unique Classification, Population Structure and Novel Allele of Neo-Tetraploid Rice
Published in Rice (New York, N.Y.) (06-02-2021)“…Background Neo-tetraploid rice (NTR) is a useful new germplasm that developed from the descendants of the autotetraploid rice (ATR) hybrids. NTR showed…”
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Insights into the nutritional properties and molecular basis of biosynthesis of amino acids and vitamins of Gastrodia elata offered by metabolomic and transcriptomic analysis
Published in Frontiers in plant science (26-06-2023)“…Blume ( ), a traditional and precious Chinese medicinal material, has been approved as a functional food. However, understanding 's nutritional properties and…”
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Genome sequencing and resequencing identified three horizontal gene transfers and uncovered the genetic mechanism on the intraspecies adaptive evolution of Gastrodia elata Blume
Published in Frontiers in plant science (04-01-2023)“…Horizontal gene transfer is a rare and useful genetic mechanism in higher plants. Blume ( ) (Orchidaceae), well known as traditional medicinal material in East…”
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DNA molecular markers in plant breeding: current status and recent advancements in genomic selection and genome editing
Published in Biotechnology, biotechnological equipment (04-03-2018)“…With the development of molecular marker technology in the 1980s, the fate of plant breeding has changed. Different types of molecular markers have been…”
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Cytological and transcriptome analyses reveal abrupt gene expression for meiosis and saccharide metabolisms that associated with pollen abortion in autotetraploid rice
Published in Molecular genetics and genomics : MGG (01-12-2018)“…Autotetraploid rice is a useful germplasm that has four chromosome sets and strong biological advantages; however, low fertility limits its commercial…”
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Molecular footprints of selection effects and whole genome duplication (WGD) events in three blueberry species: detected by transcriptome dataset
Published in BMC plant biology (03-06-2020)“…Both selection effects and whole genome duplication played very important roles in plant speciation and evolution, and to decipher the corresponding molecular…”
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Genome-wide analysis of DNA polymorphisms, the methylome and transcriptome revealed that multiple factors are associated with low pollen fertility in autotetraploid rice
Published in PloS one (06-08-2018)“…Autotetraploid rice is a useful germplasm with high biomass production; however, low fertility is the main barrier in commercial utilization. In our previous…”
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Alleviated lead toxicity in rice plant by co-augmented action of genome doubling and TiO2 nanoparticles on gene expression, cytological and physiological changes
Published in The Science of the total environment (10-02-2024)“…Lead is a very toxic and futile heavy metal for rice plants because of its injurious effects on plant growth and metabolic processes. Polyploidy or whole…”
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A Whole Genome DArTseq and SNP Analysis for Genetic Diversity Assessment in Durum Wheat from Central Fertile Crescent
Published in PloS one (18-01-2017)“…Until now, little attention has been paid to the geographic distribution and evaluation of genetic diversity of durum wheat from the Central Fertile Crescent…”
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Silicon and iron nanoparticles protect rice against lead (Pb) stress by improving oxidative tolerance and minimizing Pb uptake
Published in Scientific reports (12-03-2024)“…Lead (Pb) is toxic to the development and growth of rice plants. Nanoparticles (NPs) have been considered one of the efficient remediation techniques to…”
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Comparative Small RNA Analysis of Pollen Development in Autotetraploid and Diploid Rice
Published in International journal of molecular sciences (12-04-2016)“…MicroRNAs (miRNAs) play key roles in plant reproduction. However, knowledge on microRNAome analysis in autotetraploid rice is rather limited. Here,…”
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Global identification and analysis revealed differentially expressed lncRNAs associated with meiosis and low fertility in autotetraploid rice
Published in BMC plant biology (19-02-2020)“…Autotetraploid rice is a useful germplasm for polyploid rice breeding. Our previous research showed that non-coding RNAs might be associated with low fertility…”
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Mobile genomic element diversity in world collection of safflower (Carthamus tinctorius L.) panel using iPBS-retrotransposon markers
Published in PloS one (26-02-2019)“…Safflower (Carthamus tinctorius L.) is a multipurpose crop of dry land yielding very high quality of edible oil. Present study was aimed to investigate the…”
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Characterization of genetic diversity in Turkish common bean gene pool using phenotypic and whole-genome DArTseq-generated silicoDArT marker information
Published in PloS one (11-10-2018)“…Turkey presents a great diversity of common bean landraces in farmers' fields. We collected 183 common bean accessions from 19 different Turkish geographic…”
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Heterosis analysis and underlying molecular regulatory mechanism in a wide-compatible neo-tetraploid rice line with long panicles
Published in BMC plant biology (21-02-2020)“…Neo-tetraploid rice, which is a new germplasm developed from autotetraploid rice, has a powerful biological and yield potential and could be used for…”
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Analysis of small RNAs revealed differential expressions during pollen and embryo sac development in autotetraploid rice
Published in BMC genomics (06-02-2017)“…Partial pollen and embryo sac sterilities are the two main reasons for low fertility in autotetraploid rice. Our previous study revealed that small RNAs…”
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Evaluation of Genetic Diversity and Development of a Core Collection of Wild Rice (Oryza rufipogon Griff.) Populations in China
Published in PloS one (31-12-2015)“…Common wild rice (Oryza rufipogon Griff.), the progenitor of Asian cultivated rice (O. sativa L.), is endangered due to habitat loss. The objectives of this…”
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Comparative Cytological and Gene Expression Analysis Reveals That a Common Wild Rice Inbred Line Showed Stronger Drought Tolerance Compared with the Cultivar Rice
Published in International journal of molecular sciences (28-06-2024)“…Common wild rice ( Griff.) is an important germplasm resource containing valuable genes. Our previous analysis reported a stable wild rice inbred line, Huaye3,…”
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Comparative study on cytogenetics and transcriptome between diploid and autotetraploid rice hybrids harboring double neutral genes
Published in PloS one (28-09-2020)“…Double pollen fertility neutral genes, Sa.sup.n and Sb.sup.n, can control pollen sterility in intersubspecific (indica x japonica) rice hybrids, which has…”
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