Search Results - "Ruiz Ruano, Francisco"

Delimiting the origin of a B chromosome by FISH mapping, chromosome painting and DNA sequence analysis in Astyanax paranae (Teleostei, Characiformes) by Silva, Duílio M Z de A, Pansonato-Alves, José Carlos, Utsunomia, Ricardo, Araya-Jaime, Cristian, Ruiz-Ruano, Francisco J, Daniel, Sandro Natal, Hashimoto, Diogo Teruo, Oliveira, Cláudio, Camacho, Juan Pedro M, Porto-Foresti, Fábio, Foresti, Fausto

“…Supernumerary (B) chromosomes have been shown to contain a wide variety of repetitive sequences. For this reason, fluorescent in situ hybridisation (FISH) is a…”
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First complete female mitochondrial genome in four bivalve species genus Donax and their phylogenetic relationships within the Veneroida order by Fernández-Pérez, Jenyfer, Nantón, Ana, Ruiz-Ruano, Francisco J, Camacho, Juan Pedro M, Méndez, Josefina

“…Four species of the genus Donax (D. semistriatus, D. trunculus, D. variegatus and D. vittatus) are common on Iberian Peninsula coasts. Nevertheless, despite…”
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Irreproducible results and unsupported conclusions in Ahmad et al. [BMC genomics (2020) 21:656] by Ruiz-Ruano, Francisco J, Camacho, Juan Pedro M

“…Keywords: B chromosomes, Genes, Genomic DNA, Normalization, Transcriptome…”
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Uncovering the Ancestry of B Chromosomes in Moenkhausia sanctaefilomenae (Teleostei, Characidae) by Utsunomia, Ricardo, Silva, Duílio Mazzoni Zerbinato de Andrade, Ruiz-Ruano, Francisco J, Araya-Jaime, Cristian, Pansonato-Alves, José Carlos, Scacchetti, Priscilla Cardim, Hashimoto, Diogo Teruo, Oliveira, Claudio, Trifonov, Vladmir A, Porto-Foresti, Fábio, Camacho, Juan Pedro M, Foresti, Fausto

“…B chromosomes constitute a heterogeneous mixture of genomic parasites that are sometimes derived intraspecifically from the standard genome of the host…”
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Programmed DNA elimination of germline development genes in songbirds by Kinsella, Cormac M., Ruiz-Ruano, Francisco J., Dion-Côté, Anne-Marie, Charles, Alexander J., Gossmann, Toni I., Cabrero, Josefa, Kappei, Dennis, Hemmings, Nicola, Simons, Mirre J. P., Camacho, Juan Pedro M., Forstmeier, Wolfgang, Suh, Alexander

“…In some eukaryotes, germline and somatic genomes differ dramatically in their composition. Here we characterise a major germline–soma dissimilarity caused by a…”
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Rapid gene content turnover on the germline-restricted chromosome in songbirds by Schlebusch, Stephen A., Rídl, Jakub, Poignet, Manon, Ruiz-Ruano, Francisco J., Reif, Jiří, Pajer, Petr, Pačes, Jan, Albrecht, Tomáš, Suh, Alexander, Reifová, Radka

“…The germline-restricted chromosome (GRC) of songbirds represents a taxonomically widespread example of programmed DNA elimination. Despite its apparent…”
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Satellitome comparison of two oedipodine grasshoppers highlights the contingent nature of satellite DNA evolution by Camacho, Juan Pedro M, Cabrero, Josefa, López-León, María Dolores, Martín-Peciña, María, Perfectti, Francisco, Garrido-Ramos, Manuel A, Ruiz-Ruano, Francisco J

“…The full catalog of satellite DNA (satDNA) within a same genome constitutes the satellitome. The Library Hypothesis predicts that satDNA in relative species…”
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Editorial: Cytogenomics: Structural Organization and Evolution of Genomes by Utsunomia, Ricardo, Vaio, Magdalena, Ruiz-Ruano, Francisco J.

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Tandem Repeat DNA Provides Many Cytological Markers for Hybrid Zone Analysis in Two Subspecies of the Grasshopper Chorthippus parallelus by Navarro-Domínguez, Beatriz, Cabrero, Josefa, López-León, María Dolores, Ruiz-Ruano, Francisco J, Pita, Miguel, Bella, José L, Camacho, Juan Pedro M

“…Recent advances in next generation sequencing (NGS) have greatly increased our understanding of non-coding tandem repeat (TR) DNA. Here we show how TR DNA can…”
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Transient Microgeographic Clines during B Chromosome Invasion by Camacho, Juan Pedro M., Shaw, Michael W., Cabrero, Josefa, Bakkali, Mohammed, Ruíz-Estévez, Mercedes, Ruíz-Ruano, Francisco J., Martín-Blázquez, Rubén, López-León, María Dolores

“…The near-neutral model of B chromosome evolution predicts that the invasion of a new population should last some tens of generations, but the details on how it…”
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Author Correction: Satellitome comparison of two oedipodine grasshoppers highlights the contingent nature of satellite DNA evolution by Camacho, Juan Pedro M, Cabrero, Josefa, López-León, María Dolores, Martín-Peciña, María, Perfectti, Francisco, Garrido-Ramos, Manuel A, Ruiz-Ruano, Francisco J

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Long-term persistence of supernumerary B chromosomes in multiple species of Astyanax fish by Silva, Duílio Mazzoni Zerbinato de Andrade, Ruiz-Ruano, Francisco J, Utsunomia, Ricardo, Martín-Peciña, María, Castro, Jonathan Pena, Freire, Paula Paccielli, Carvalho, Robson Francisco, Hashimoto, Diogo T, Suh, Alexander, Oliveira, Claudio, Porto-Foresti, Fábio, Artoni, Roberto Ferreira, Foresti, Fausto, Camacho, Juan Pedro M

“…Eukaryote genomes frequently harbor supernumerary B chromosomes in addition to the "standard" A chromosome set. B chromosomes are thought to arise as…”
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High-throughput analysis of the satellitome illuminates satellite DNA evolution by Ruiz-Ruano, Francisco J., López-León, María Dolores, Cabrero, Josefa, Camacho, Juan Pedro M.

“…Satellite DNA (satDNA) is a major component yet the great unknown of eukaryote genomes and clearly underrepresented in genome sequencing projects. Here we show…”
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A Glimpse into the Satellite DNA Library in Characidae Fish (Teleostei, Characiformes) by Utsunomia, Ricardo, Ruiz-Ruano, Francisco J, Silva, Duílio M Z A, Serrano, Érica A, Rosa, Ivana F, Scudeler, Patrícia E S, Hashimoto, Diogo T, Oliveira, Claudio, Camacho, Juan Pedro M, Foresti, Fausto

“…Satellite DNA (satDNA) is an abundant fraction of repetitive DNA in eukaryotic genomes and plays an important role in genome organization and evolution. In…”
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The Ku70 DNA-repair protein is involved in centromere function in a grasshopper species by Cabrero, Josefa, Bakkali, Mohammed, Navarro-Domínguez, Beatriz, Ruíz-Ruano, Francisco J., Martín-Blázquez, Rubén, López-León, María Dolores, Camacho, Juan Pedro M.

“…The Ku70 protein is involved in numerous cell functions, the nonhomologous end joining (NHEJ) DNA repair pathway being the best known. Here, we report a novel…”
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In-Depth Satellitome Analyses of 37 Drosophila Species Illuminate Repetitive DNA Evolution in the Drosophila Genus by de Lima, Leonardo G., Ruiz-Ruano, Francisco J.

“…Abstract Satellite DNAs (SatDNA) are ubiquitously present in eukaryotic genomes and have been recently associated with several biological roles. Understanding…”
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DNA metabarcoding of Neotropical ichthyoplankton: Enabling high accuracy with lower cost by Nobile, André B., Freitas-Souza, Diogo, Ruiz-Ruano, Francisco J., Nobile, Maria Lígia M. O., Costa, Gabriela O., de Lima, Felipe P., Camacho, Juan Pedro M., Foresti, Fausto, Oliveira, Claudio

“…Knowledge of ichthyoplankton dynamics is extremely important for conservation management as it can provide information about preferential spawning sites,…”
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A mobile insulator system to detect and disrupt cis-regulatory landscapes in vertebrates by Bessa, José, Luengo, Mario, Rivero-Gil, Solangel, Ariza-Cosano, Ana, Maia, António H F, Ruiz-Ruano, Francisco J, Caballero, Pablo, Naranjo, Silvia, Carvajal, Jaime J, Gómez-Skarmeta, José Luis

“…In multicellular organisms, cis-regulation controls gene expression in space and time. Despite the essential implication of cis-regulation in the development…”
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Songbird germline-restricted chromosome as a potential arena of genetic conflicts by Vontzou, Niki, Pei, Yifan, Mueller, Jakob C, Reifová, Radka, Ruiz-Ruano, Francisco J, Schlebusch, Stephen A, Suh, Alexander

“…Genetic conflicts can arise between components of the genome with different inheritance strategies. The germline-restricted chromosome (GRC) of songbirds shows…”
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High dynamism for neo-sex chromosomes: satellite DNAs reveal complex evolution in a grasshopper by Ferretti, Ana B S M, Milani, Diogo, Palacios-Gimenez, Octavio M, Ruiz-Ruano, Francisco J, Cabral-de-Mello, Diogo C

“…A common characteristic of sex chromosomes is the accumulation of repetitive DNA, which accounts for their diversification and degeneration. In grasshoppers,…”
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