Search Results - "Rozemuller, E. H."

Sequencing analysis of RNA and DNA of exons 1 through 11 shows p53 gene alterations to be present in almost 100% of head and neck squamous cell cancers by Kropveld, A, Rozemuller, E H, Leppers, F G, Scheidel, K C, de Weger, R A, Koole, R, Hordijk, G J, Slootweg, P J, Tilanus, M G

“…Data on p53 alterations in human cancers are mainly based on studies restricted to the core domain (exons 5-9), because mutations outside this region are…”
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Common and well-documented HLA alleles: 2012 update to the CWD catalogue by Mack, S. J., Cano, P., Hollenbach, J. A., He, J., Hurley, C. K., Middleton, D., Moraes, M. E., Pereira, S. E., Kempenich, J. H., Reed, E. F., Setterholm, M., Smith, A. G., Tilanus, M. G., Torres, M., Varney, M. D., Voorter, C. E. M., Fischer, G. F., Fleischhauer, K., Goodridge, D., Klitz, W., Little, A.-M., Maiers, M., Marsh, S. G. E., Müller, C. R., Noreen, H., Rozemuller, E. H., Sanchez-Mazas, A., Senitzer, D., Trachtenberg, E., Fernandez-Vina, Marcelo

“…We have updated the catalogue of common and well‐documented (CWD) human leukocyte antigen (HLA) alleles to reflect current understanding of the prevalence of…”
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Sensitive detection of p53 mutation: analysis by direct sequencing and multisequence analysis by Rozemuller, E H, Kropveld, A, Kreyveld, E, Leppers, F G, Scheidel, K C, Slootweg, P J, Tilanus, M G

“…In a wide variety of tumors, p53 mutations may have prognostic and diagnostic value. However, mutational screening methods often are restricted to the core…”
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Assignment of HLA-DPB alleles by computerized matching based upon sequence data by Rozemuller, E H, Bouwens, A G, Bast, B E, Tilanus, M G

“…Routine HLA typing by serology has been supported by DNA or protein analysis of the respective molecules in cases when serologic typing was inconclusive or…”
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A multicenter international evaluation of single-tube amplification protocols for sequencing-based typing of HLA-DRB1 and HLA-DRB3,4,5 by Sayer, D.C., Whidborne, R., De Santis, D., Rozemuller, E.H., Christiansen, F.T., Tilanus, M.G.

“…:  We have described previously a novel single‐tube polymerase chain reaction (PCR) amplification (STAmp) protocol for the efficient sequencing‐based typing…”
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Comparison of DRB sequence-based typing using different strategies by Voorter, C. E. M., Rozemuller, E. H., de Bruyn-Geraets, D., van der Zwan, A.-W., Tilanus, M. G.J., van den Berg-Loonen, E. M.

“…Sequence‐based typing (SBT) has become an important tool in the identification of HLA alleles. In this study a comparison was made between SBT of DRB 1/3/4/5…”
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Sequencing-based typing of MICA reveals 33 alleles: a study on linkage with classical HLA genes by Visser, C J, Tilanus, M G, Tatari, Z, van der Zwan, A W, Bakker, R, Rozemuller, E H, Schaeffer, V, Tamouza, R, Charron, D

“…Polymorphism of MICA exons 2, 3, 4, and 5 was investigated in DNA samples using a sequencing based typing (SBT) approach. In connection with these exons, we…”
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Bioinformatics: analysis of HLA sequence data by Rozemuller, E H, Tilanus, M G

“…High resolution HLA typing is a requirement for the selection of matched donors in hematopoietic cell transplantation. The high resolution typing method that…”
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A Generic Sequencing Based Typing Approach for the Identification of HLA-A Diversity by Scheltinga, Sitha A., Johnston-Dow, Leslie A., White, Camille B., van der Zwan, Anne-Wil, Bakema, Jantine E., Rozemuller, Erik H., van den Tweel, Jan G., Kronick, Mel N., Tilanus, Marcel G.J.

“…Sequencing Based Typing (SBT) is a generic approach for the identification of HLA-A polymorphism. This approach includes the high resolution typing of the…”
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HLA-A3306, a novel variant in the Indian population by Rozemuller, E. H., Mehra, N., Van Der Zwan, A.-W., Jaini, R., Tilanus, M. G. J.

“…: We describe a new HLA‐A allele, A*3306, which was identified by sequencing based typing (SBT) in an individual of Indian origin. A*3306 is similar to A*3303,…”
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Going back to the roots: effective utilisation of HLA typing information for bone marrow registries requires full knowledge of the DNA sequences of the oligonucleotide reagents used in the testing by Helmberg, W., Hegland, J., Hurley, C.K., Maiers, M., Marsh, S.G.E., Müller, C., Rozemuller, E.H.

“…: Information obtained by DNA‐based HLA typing assays is more detailed and of higher quality than that obtained by conventional serological techniques…”
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Identifying new alleles using the new-allele reporter in SBTengine(R) by Rozemuller, E H, Koene, GJPA, Mulder, W

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A computerized method to predict the discriminatory properties for class II sequencing based typing by Rozemuller, Erik H., Tilanus, Marcel G.J.

“…Accurate identification of alleles or groups of alleles is obtained using DNA techniques for HLA class II typing. In PCR-SSP and PCR-SSO the typing resolution…”
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Ambiguous DPB1 allele combinations resolved by direct sequencing of selectively amplified alleles by Versluis, L F, Rozemuller, E H, Duran, K, Tilanus, M G

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DPB18501, a novel DPB1 variant in the US Black population by Rozemuller, E.H., Van Der Zwan, A.W., Voorter, C.E.M., Tilanus, M.G.J.

“…: We describe a new DPB1 allele, DPB1*8501, which was identified by sequencing‐based typing (SBT) in the UCLA exchange. DPB1*8501 is similar to DPB1*2701 with…”
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HLA-A towards a high-resolution DNA typing by Scheltinga, S.A., Williams, F., van der Zwan, A.-W., Rozemulier, E.H., Middleton, D., Tilanus, M.G.J.

“…: Sequencing‐based typing (SBT) and sequence‐specific oligonucleotide probing (PCR‐SSOP) are DNA‐based typing approaches to identify HLA‐A alleles. In this…”
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An evaluation of a multicenter study on HLA-DPB1 typing using solid-phase Taq-cycle sequencing chemistry by Rozemuller, E H, Eliaou, J F, Baxter-Lowe, L A, Charron, D, Kronick, M, Tilanus, M G

“…In HLA Class II genes, polymorphism is mainly located in the second exon. Most DNA based typing methods are confined to the identification of specific sequence…”
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Sequenase sequence profiles used for HLA-DPB1 sequencing-based typing by Rozemuller, E H, Chadwick, B, Charron, D, Baxter-Lowe, L A, Eliaou, J F, Johnston-Dow, L, Tilanus, M G

“…Sequencing-based HLA typing (SBT) is a PCR based high resolution HLA typing method in which polymorphic regions of the gene are sequenced and directly used for…”
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NK-KIR ligand identification: a quick Q-PCR approach for HLA-C epitope typing by Schellekens, J., Rozemuller, E. H., Borst, H. P. E., Otten, H. G., Van Den Tweel, J. G., Tilanus, M. G. J.

“…Interaction of donor natural killer (NK)‐cell‐associated killer cell immunoglobulin‐like receptors (KIRs) with the patient’s human leukocyte antigen‐C (HLA‐C)…”
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KIR2DL4 gene polymorphism identified by sequencing based typing (KIR-SBT) and the construction of its allele database for direct sequence analysis by Schellekens, J, Wijbenga, J, Rozemuller, E H, Tilanus, MGJ

“…The killer cell immunoglobulin like receptors (KIR) on natural killer (NK) cells recognize defined groups of HLA class I alleles. By this mechanism the NK…”
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