Search Results - "Royle, J."
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1
Trap configuration and spacing influences parameter estimates in spatial capture-recapture models
Published in PloS one (05-02-2014)“…An increasing number of studies employ spatial capture-recapture models to estimate population size, but there has been limited research on how different…”
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Impacts of forest fragmentation on species richness: a hierarchical approach to community modelling
Published in The Journal of applied ecology (01-08-2009)“…1. Species richness is often used as a tool for prioritizing conservation action. One method for predicting richness and other summaries of community structure…”
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3
Migratory behavior and winter geography drive differential range shifts of eastern birds in response to recent climate change
Published in Proceedings of the National Academy of Sciences - PNAS (09-06-2020)“…Over the past half century, migratory birds in North America have shown divergent population trends relative to resident species, with the former declining…”
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Estimating and forecasting spatial population dynamics of apex predators using transnational genetic monitoring
Published in Proceedings of the National Academy of Sciences - PNAS (01-12-2020)“…The ongoing recovery of terrestrial large carnivores in North America and Europe is accompanied by intense controversy. On the one hand, reestablishment of…”
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Clathrin-Mediated Endocytosis Is the Dominant Mechanism of Vesicle Retrieval at Hippocampal Synapses
Published in Neuron (Cambridge, Mass.) (21-09-2006)“…The maintenance of synaptic transmission requires that vesicles be recycled after releasing neurotransmitter. Several modes of retrieval have been proposed to…”
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N-Mixture Models for Estimating Population Size from Spatially Replicated Counts
Published in Biometrics (01-03-2004)“…Spatial replication is a common theme in count surveys of animals. Such surveys often generate sparse count data from which it is difficult to estimate…”
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Sharing land via keystone structure: Retaining naturally regenerated trees may efficiently benefit birds in plantations
Published in Ecological applications (01-04-2023)“…Meeting food/wood demands with increasing human population and per‐capita consumption is a pressing conservation issue, and is often framed as a choice between…”
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A Bayesian State-space Formulation of Dynamic Occupancy Models
Published in Ecology (Durham) (01-07-2007)“…Species occurrence and its dynamic components, extinction and colonization probabilities, are focal quantities in biogeography and metapopulation biology, and…”
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Optimal sampling design for spatial capture–recapture
Published in Ecology (Durham) (01-03-2021)“…Spatial capture–recapture (SCR) has emerged as the industry standard for estimating population density by leveraging information from spatial locations of…”
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Spatially explicit models for inference about density in unmarked or partially marked populations
Published in The annals of applied statistics (01-06-2013)“…Recently developed spatial capture–recapture (SCR) models represent a major advance over traditional capture–recapture (CR) models because they yield explicit…”
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11
Hierarchical Bayes estimation of species richness and occupancy in spatially replicated surveys
Published in The Journal of applied ecology (01-04-2008)“…1. Species richness is the most widely used biodiversity metric, but cannot be observed directly as, typically, some species are overlooked. Imperfect…”
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A Hierarchical Model for Spatial Capture-Recapture Data
Published in Ecology (Durham) (01-08-2008)“…Estimating density is a fundamental objective of many animal population studies. Application of methods for estimating population size from ostensibly closed…”
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13
Inference about density and temporary emigration in unmarked populations
Published in Ecology (Durham) (01-07-2011)“…Few species are distributed uniformly in space, and populations of mobile organisms are rarely closed with respect to movement, yet many models of density rely…”
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14
Multi-species occurrence models to evaluate the effects of conservation and management actions
Published in Biological conservation (01-02-2010)“…Conservation and management actions often have direct and indirect effects on a wide range of species. As such, it is important to evaluate the impacts that…”
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15
Spatial proximity moderates genotype uncertainty in genetic tagging studies
Published in Proceedings of the National Academy of Sciences - PNAS (28-07-2020)“…Accelerating declines of an increasing number of animal populations worldwide necessitate methods to reliably and efficiently estimate demographic parameters…”
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16
Designing occupancy studies: general advice and allocating survey effort
Published in The Journal of applied ecology (01-12-2005)“…1. The fraction of sampling units in a landscape where a target species is present (occupancy) is an extensively used concept in ecology. Yet in many…”
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FerriTag is a new genetically-encoded inducible tag for correlative light-electron microscopy
Published in Nature communications (04-07-2018)“…A current challenge is to develop tags to precisely visualize proteins in cells by light and electron microscopy. Here, we introduce FerriTag, a…”
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A review of N‐mixture models
Published in Wiley interdisciplinary reviews. Computational statistics (01-11-2023)“…N‐mixture models were born in 2004 of the necessity to model animal population size from point counts with imperfect detection of individuals, where…”
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Estimating true instead of apparent survival using spatial Cormack–Jolly–Seber models
Published in Methods in ecology and evolution (01-12-2014)“…Summary Survival is often estimated from capture–recapture data using Cormack–Jolly–Seber (CJS) models, where mortality and emigration cannot be distinguished,…”
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Know what you don't know: Embracing state uncertainty in disease‐structured multistate models
Published in Methods in ecology and evolution (01-12-2022)“…Hidden Markov models (HMMs) are broadly applicable hierarchical models that derive their utility from separating state processes from observation processes…”
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