Search Results - "Roy, Paul H"

The resistome of Pseudomonas aeruginosa in relationship to phenotypic susceptibility by Kos, Veronica N, Déraspe, Maxime, McLaughlin, Robert E, Whiteaker, James D, Roy, Paul H, Alm, Richard A, Corbeil, Jacques, Gardner, Humphrey

“…Many clinical isolates of Pseudomonas aeruginosa cause infections that are difficult to eradicate due to their resistance to a wide variety of antibiotics. Key…”
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Flexible protein database based on amino acid k-mers by Déraspe, Maxime, Boisvert, Sébastien, Laviolette, François, Roy, Paul H, Corbeil, Jacques

“…Identification of proteins is one of the most computationally intensive steps in genomics studies. It usually relies on aligners that do not accommodate rich…”
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Complete genome sequence of the multiresistant taxonomic outlier Pseudomonas aeruginosa PA7 by Roy, Paul H, Tetu, Sasha G, Larouche, André, Elbourne, Liam, Tremblay, Simon, Ren, Qinghu, Dodson, Robert, Harkins, Derek, Shay, Ryan, Watkins, Kisha, Mahamoud, Yasmin, Paulsen, Ian T

“…Pseudomonas aeruginosa PA7 is a non-respiratory human isolate from Argentina that is multiresistant to antibiotics. We first sequenced gyrA, gyrB, parC, parE,…”
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Phenetic Comparison of Prokaryotic Genomes Using k-mers by Déraspe, Maxime, Raymond, Frédéric, Boisvert, Sébastien, Culley, Alexander, Roy, Paul H, Laviolette, François, Corbeil, Jacques

“…Bacterial genomics studies are getting more extensive and complex, requiring new ways to envision analyses. Using the Ray Surveyor software, we demonstrate…”
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Complete Sequence of pOZ176, a 500-Kilobase IncP-2 Plasmid Encoding IMP-9-Mediated Carbapenem Resistance, from Outbreak Isolate Pseudomonas aeruginosa 96 by JIANHUI XIONG, ALEXANDER, David C, MA, Jennifer H, DERASPE, Maxime, LOW, Donald E, JAMIESON, Frances B, ROY, Paul H

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Comment on "Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection" by A.N. Zhang et al by Roy, Paul H, Partridge, Sally R, Hall, Ruth M

“…An article published in Microbiome in July 2018 uses incorrect definitions of integron integrase IntI1 and of class 1 integrons that affect the interpretation…”
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Culture-enriched human gut microbiomes reveal core and accessory resistance genes by Raymond, Frédéric, Boissinot, Maurice, Ouameur, Amin Ahmed, Déraspe, Maxime, Plante, Pier-Luc, Kpanou, Sewagnouin Rogia, Bérubé, Ève, Huletsky, Ann, Roy, Paul H, Ouellette, Marc, Bergeron, Michel G, Corbeil, Jacques

“…Low-abundance microorganisms of the gut microbiome are often referred to as a reservoir for antibiotic resistance genes. Unfortunately, these less-abundant…”
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Complete Genome Sequences of Klebsiella michiganensis and Citrobacter farmeri, KPC-2-Producers Serially Isolated from a Single Patient by Abed, Jehane Y., Déraspe, Maxime, Bérubé, Ève, D’Iorio, Matthew, Dewar, Ken, Boissinot, Maurice, Corbeil, Jacques, Bergeron, Michel G., Roy, Paul H.

“…Carbapenemase-producing Enterobacterales, including KPC-2 producers, have become a major clinical problem. During an outbreak in Quebec City, Canada,…”
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Potential Role of Group IIC-attC Introns in Integron Cassette Formation by LEON, Grégory, ROY, Paul H

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IntI2 Integron Integrase in Tn7 by Hansson, Karin, Sundström, Lars, Pelletier, Alex, Roy, Paul H

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Development of a PCR Assay for Identification of Staphylococci at Genus and Species Levels by MARTINEAU, Francis, PICARD, Francois J, KE, Danbing, PARADIS, Sonia, ROY, Paul H, OUELLETTE, Marc, BERGERON, Michel G

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Use of tuf Sequences for Genus-Specific PCR Detection and Phylogenetic Analysis of 28 Streptococcal Species by PICARD, Francois J, DANBING KE, BOUDREAU, Dominique K, BOISSINOT, Maurice, HULETSKY, Ann, RICHARD, Dave, OUELLETTE, Marc, ROY, Paul H, BERGERON, Michel G

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Presence of a Group II Intron in a Multiresistant Serratia marcescens Strain That Harbors Three Integrons and a Novel Gene Fusion by CENTRON, Daniela, ROY, Paul H

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The initial state of the human gut microbiome determines its reshaping by antibiotics by Raymond, Frédéric, Ouameur, Amin A, Déraspe, Maxime, Iqbal, Naeem, Gingras, Hélène, Dridi, Bédis, Leprohon, Philippe, Plante, Pier-Luc, Giroux, Richard, Bérubé, Ève, Frenette, Johanne, Boudreau, Dominique K, Simard, Jean-Luc, Chabot, Isabelle, Domingo, Marc-Christian, Trottier, Sylvie, Boissinot, Maurice, Huletsky, Ann, Roy, Paul H, Ouellette, Marc, Bergeron, Michel G, Corbeil, Jacques

“…Microbiome studies have demonstrated the high inter-individual diversity of the gut microbiota. However, how the initial composition of the microbiome affects…”
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Effect of attC structure on cassette excision by integron integrases by Larouche, André, Roy, Paul H

“…Integrons are genetic elements able to integrate and disseminate genes as cassettes by a site-specific recombination mechanism. These elements contain a gene…”
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Integron Integrases Possess a Unique Additional Domain Necessary for Activity by Messier, N, Roy, P H

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Analysis by Mutagenesis of a Chromosomal Integron Integrase from Shewanella amazonensis SB2BT by LAROUCHE, André, ROY, Paul H

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blaCTX-M-2 Is Located in an Unusual Class 1 Integron (In35) Which Includes Orf513 by ARDUINO, Sonia M, ROY, Paul H, JACOBY, George A, ORMAN, Betina E, PINEIRO, Silvia A, CENTRON, Daniela

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Development of Conventional and Real-Time PCR Assays for the Rapid Detection of Group B Streptococci by Ke, Danbing, Menard, Christian, Picard, Francois J, Boissinot, Maurice, Ouellette, Marc, Roy, Paul H, Bergeron, Michel G

“…Group B streptococci (GBS), or Streptococcus agalactiae, are the leading bacterial cause of meningitis and bacterial sepsis in newborns. Currently available…”
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Classifying mobile genetic elements and their interactions from sequence data: The importance of existing biological knowledge by Partridge, Sally R, Enne, Virve I, Grohmann, Elisabeth, Hall, Ruth M, Rood, Julian I, Roy, Paul H, Thomas, Christopher M, Firth, Neville

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