Search Results - "Rothenberg, Daniel"

Defining HLA-II Ligand Processing and Binding Rules with Mass Spectrometry Enhances Cancer Epitope Prediction by Abelin, Jennifer G., Harjanto, Dewi, Malloy, Matthew, Suri, Prerna, Colson, Tyler, Goulding, Scott P., Creech, Amanda L., Serrano, Lia R., Nasir, Gibran, Nasrullah, Yusuf, McGann, Christopher D., Velez, Diana, Ting, Ying S., Poran, Asaf, Rothenberg, Daniel A., Chhangawala, Sagar, Rubinsteyn, Alex, Hammerbacher, Jeff, Gaynor, Richard B., Fritsch, Edward F., Greshock, Joel, Oslund, Rob C., Barthelme, Dominik, Addona, Terri A., Arieta, Christina M., Rooney, Michael S.

“…Increasing evidence indicates CD4+ T cells can recognize cancer-specific antigens and control tumor growth. However, it remains difficult to predict the…”
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Sequence-based prediction of SARS-CoV-2 vaccine targets using a mass spectrometry-based bioinformatics predictor identifies immunogenic T cell epitopes by Poran, Asaf, Harjanto, Dewi, Malloy, Matthew, Arieta, Christina M, Rothenberg, Daniel A, Lenkala, Divya, van Buuren, Marit M, Addona, Terri A, Rooney, Michael S, Srinivasan, Lakshmi, Gaynor, Richard B

“…The ongoing COVID-19 pandemic has created an urgency to identify novel vaccine targets for protective immunity against SARS-CoV-2. Early reports identify…”
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On the representation of aerosol activation and its influence on model-derived estimates of the aerosol indirect effect by Rothenberg, Daniel, Avramov, Alexander, Wang, Chien

“…Interactions between aerosol particles and clouds contribute a great deal of uncertainty to the scientific community's understanding of anthropogenic climate…”
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Early signaling dynamics of the epidermal growth factor receptor by Reddy, Raven J., Gajadhar, Aaron S., Swenson, Eric J., Rothenberg, Daniel A., Curran, Timothy G., White, Forest M.

“…Despite extensive study of the EGF receptor (EGFR) signaling network, the immediate posttranslational changes that occur in response to growth factor…”
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The T-cell-directed vaccine BNT162b4 encoding conserved non-spike antigens protects animals from severe SARS-CoV-2 infection by Arieta, Christina M., Xie, Yushu Joy, Rothenberg, Daniel A., Diao, Huitian, Harjanto, Dewi, Meda, Shirisha, Marquart, Krisann, Koenitzer, Byron, Sciuto, Tracey E., Lobo, Alexander, Zuiani, Adam, Krumm, Stefanie A., Cadima Couto, Carla Iris, Hein, Stephanie, Heinen, André P., Ziegenhals, Thomas, Liu-Lupo, Yunpeng, Vogel, Annette B., Srouji, John R., Fesser, Stephanie, Thanki, Kaushik, Walzer, Kerstin, Addona, Theresa A., Türeci, Özlem, Şahin, Uğur, Gaynor, Richard B., Poran, Asaf

“…T cell responses play an important role in protection against beta-coronavirus infections, including SARS-CoV-2, where they associate with decreased COVID-19…”
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Health co-benefits of sub-national renewable energy policy in the US by Dimanchev, Emil G, Paltsev, Sergey, Yuan, Mei, Rothenberg, Daniel, Tessum, Christopher W, Marshall, Julian D, Selin, Noelle E

“…State and local policy-makers in the US have shown interest in transitioning electricity systems toward renewable energy sources and in mitigating harmful air…”
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Uncertainty in counting ice nucleating particles with continuous flow diffusion chambers by Garimella, Sarvesh, Rothenberg, Daniel A, Wolf, Martin J, David, Robert O, Kanji, Zamin A, Wang, Chien, Rösch, Michael, Cziczo, Daniel J

“…This study investigates the measurement of ice nucleating particle (INP) concentrations and sizing of crystals using continuous flow diffusion…”
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Aurora B kinase phosphorylates and instigates degradation of p53 by Gully, Chris P, Velazquez-Torres, Guermarie, Shin, Ji-Hyun, Fuentes-Mattei, Enrique, Wang, Edward, Carlock, Colin, Chen, Jian, Rothenberg, Daniel, Adams, Henry P, Choi, Hyun Ho, Guma, Sergei, Phan, Liem, Chou, Ping-Chieh, Su, Chun-Hui, Zhang, Fanmao, Chen, Jiun-Sheng, Yang, Tsung-Ying, Yeung, Sai-Ching J, Lee, Mong-Hong

“…Aurora B is a mitotic checkpoint kinase that plays a pivotal role in the cell cycle, ensuring correct chromosome segregation and normal progression through…”
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Defining HLA-II ligand processing and binding rules with mass spectrometry enhances cancer epitope prediction by Abelin, Jennifer G., Harjanto, Dewi, Malloy, Matthew, Suri, Prerna, Colson, Tyler, Goulding, Scott P., Creech, Amanda L., Serrano, Lia R., Nasir, Gibran, Nasrullah, Yusuf, McGann, Christopher D., Velez, Diana, Ting, Ying S., Poran, Asaf, Rothenberg, Daniel A., Chhangawala, Sagar, Rubinsteyn, Alex, Hammerbacher, Jeff, Gaynor, Richard B., Fritsch, Edward F., Greshock, Joel, Oslund, Rob C., Barthelme, Dominik, Addona, Terri A., Arieta, Christina M., Rooney, Michael S.

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Effective radiative forcing in the aerosol–climate model CAM5.3-MARC-ARG by Grandey, Benjamin S., Rothenberg, Daniel, Avramov, Alexander, Jin, Qinjian, Lee, Hsiang-He, Liu, Xiaohong, Lu, Zheng, Albani, Samuel, Wang, Chien

“…We quantify the effective radiative forcing (ERF) of anthropogenic aerosols modelled by the aerosol–climate model CAM5.3-MARC-ARG. CAM5.3-MARC-ARG is a new…”
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An aerosol activation metamodel of v1.2.0 of the pyrcel cloud parcel model: development and offline assessment for use in an aerosol–climate model by Rothenberg, Daniel, Wang, Chien

“…We describe an emulator of a detailed cloud parcel model which has been trained to assess droplet nucleation from a complex, multimodal aerosol size…”
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A Proteomics Approach to Profiling the Temporal Translational Response to Stress and Growth by Rothenberg, Daniel A, Taliaferro, J Matthew, Huber, Sabrina M, Begley, Thomas J, Dedon, Peter C, White, Forest M

“…To quantify dynamic protein synthesis rates, we developed MITNCAT, a method combining multiplexed isobaric mass tagging with pulsed SILAC (pSILAC) and…”
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Systematic discovery and validation of T cell targets directed against oncogenic KRAS mutations by Choi, Jaewon, Goulding, Scott P., Conn, Brandon P., McGann, Christopher D., Dietze, Jared L., Kohler, Jessica, Lenkala, Divya, Boudot, Antoine, Rothenberg, Daniel A., Turcott, Paul J., Srouji, John R., Foley, Kendra C., Rooney, Michael S., van Buuren, Marit M., Gaynor, Richard B., Abelin, Jennifer G., Addona, Terri A., Juneja, Vikram R.

“…Oncogenic mutations in KRAS can be recognized by T cells on specific class I human leukocyte antigen (HLA-I) molecules, leading to tumor control. To date, the…”
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Identification of Direct Kinase Substrates Using Analogue-Sensitive Alleles by Rothenberg, Daniel A, Gordon, Elizabeth A, White, Forest M, Lourido, Sebastian

“…Identifying the substrates of protein kinases remains a major obstacle in the elucidation of eukaryotic signaling pathways. Promiscuity among kinases and their…”
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The SPectrometer for Ice Nuclei (SPIN): an instrument to investigate ice nucleation by Garimella, Sarvesh, Kristensen, Thomas Bjerring, Ignatius, Karolina, Welti, Andre, Voigtländer, Jens, Kulkarni, Gourihar R, Sagan, Frank, Kok, Gregory Lee, Dorsey, James, Nichman, Leonid, Rothenberg, Daniel Alexander, Rösch, Michael, Kirchgäßner, Amélie Catharina Ruth, Ladkin, Russell, Wex, Heike, Wilson, Theodore W, Ladino, Luis Antonio, Abbatt, Jon P. D, Stetzer, Olaf, Lohmann, Ulrike, Stratmann, Frank, Cziczo, Daniel James

“…The SPectrometer for Ice Nuclei (SPIN) is a commercially available ice nucleating particle (INP) counter manufactured by Droplet Measurement Technologies in…”
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Moral Injury and the Lived Experience of Political Violence by Rothenberg, Daniel

“…Moral injury names how the lived experience of armed conflict can damage an individual's ethical foundations, often with serious consequences. While the term…”
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Introduction by Kirkpatrick, Jesse, Rothenberg, Daniel

“…In August 2021, the United States withdrew from Afghanistan, ending a twenty year war—the longest in American history. The past two decades of armed conflict,…”
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Introduction by Kirkpatrick, Jesse, Rothenberg, Daniel

“…In August 2021, the United States withdrew from Afghanistan, ending a twenty year war—the longest in American history. The past two decades of armed conflict,…”
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Introduction by Kirkpatrick, Jesse, Rothenberg, Daniel

“…In August 2021, the United States withdrew from Afghanistan, ending a twenty year war—the longest in American history. The past two decades of armed conflict,…”
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Field-Based Methods of Research on Human Rights Violations by Rothenberg, Daniel

“…Field-based research lies at the heart of human rights discourse and practice. Yet, there is a lack of consistency and coherence in the methodologies used and…”
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