Search Results - "Rosema, Sigrid"

Application of next generation sequencing in clinical microbiology and infection prevention by Deurenberg, Ruud H., Bathoorn, Erik, Chlebowicz, Monika A., Couto, Natacha, Ferdous, Mithila, García-Cobos, Silvia, Kooistra-Smid, Anna M.D., Raangs, Erwin C., Rosema, Sigrid, Veloo, Alida C.M., Zhou, Kai, Friedrich, Alexander W., Rossen, John W.A.

“…•Next generation sequencing makes it possible to standardise methods.•Next generation sequencing has a large number of applications in clinical…”
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Long-read sequencing-based in silico phage typing of vancomycin-resistant Enterococcus faecium by Lisotto, Paola, Raangs, Erwin C, Couto, Natacha, Rosema, Sigrid, Lokate, Mariëtte, Zhou, Xuewei, Friedrich, Alexander W, Rossen, John W. A, Harmsen, Hermie J. M, Bathoorn, Erik, Chlebowicz-Fliss, Monika A

“…Vancomycin-resistant enterococci (VRE) are successful nosocomial pathogens able to cause hospital outbreaks. In the Netherlands, core-genome MLST (cgMLST)…”
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Review on infection control strategies to minimize outbreaks of the emerging pathogen Elizabethkingia anophelis by Mallinckrodt, Lisa, Huis in 't Veld, Robert, Rosema, Sigrid, Voss, Andreas, Bathoorn, Erik

“…Background Elizabethkingia anophelis is a multi-drug resistant emerging opportunistic pathogen with a high mortality rate, causing healthcare-associated…”
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Molecular Characterisation of Vancomycin-Resistant Enterococcus faecium Isolates Belonging to the Lineage ST117/CT24 Causing Hospital Outbreaks by Lisotto, Paola, Couto, Natacha, Rosema, Sigrid, Lokate, Mariëtte, Zhou, Xuewei, Bathoorn, Erik, Harmsen, Hermie J. M., Friedrich, Alexander W., Rossen, John W. A., Chlebowicz-Fliss, Monika A.

“…Background: Vancomycin-resistant Enterococcus faecium (VREfm) is a successful nosocomial pathogen. The current molecular method recommended in the Netherlands…”
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Author Correction: Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens by Couto, Natacha, Schuele, Leonard, Raangs, Erwin C., Machado, Miguel P., Mendes, Catarina I., Jesus, Tiago F., Chlebowicz, Monika, Rosema, Sigrid, Ramirez, Mário, Carriço, João A., Autenrieth, Ingo B., Friedrich, Alex W., Peter, Silke, Rossen, John W.

“…A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper…”
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An ancient family of mobile genomic islands introducing cephalosporinase and carbapenemase genes in Enterobacteriaceae by Nepal, Suruchi, Bonn, Florian, Grasso, Stefano, Stobernack, Tim, de Jong, Anne, Zhou, Kai, Wedema, Ronald, Rosema, Sigrid, Becher, Dörte, Otto, Andreas, Rossen, John W., van Dijl, Jan Maarten, Bathoorn, Erik

“…The exchange of mobile genomic islands (MGIs) between microorganisms is often mediated by phages, which may provide benefits to the phage's host. The present…”
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Nosocomial transmission of tet(x3) , bla NDM-1 and bla OXA-97 -carrying Acinetobacter baumannii conferring resistance to eravacycline and omadacycline, the Netherlands, March to August 2021 by Talsma, Ditmer T, Monteiro, Rodrigo, Flores-Vallejo, Rosario Del Carmen, Heuvelmans, Maarten, Le, Thuy-Nga, Hendrickx, Antoni Pa, Rosema, Sigrid, Maat, Ianthe, van Dijl, Jan Maarten, Bathoorn, Erik

“…Carbapenem-resistant (CRAb) is an important pathogen causing serious nosocomial infections. We describe an outbreak of CRAb in an intensive care unit in the…”
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Neonatal Elizabethkingia anophelis meningitis originating from the water reservoir of an automated infant milk dispenser, the Netherlands, February 2024 by Brandsema, B Ruben, Fleurke, Ger-Jan, Rosema, Sigrid, Schins, Eke Mw, Helfferich, Jelte, Bathoorn, Erik

“…is a multidrug-resistant pathogen causing high mortality and morbidity in adults with comorbidities and neonates. We report a Dutch case of meningitis in a…”
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Nosocomial transmission of tet(x3), blaNDM-1 and blaOXA-97-carrying Acinetobacter baumannii conferring resistance to eravacycline and omadacycline, the Netherlands, March to August 2021 by Talsma, Ditmer T, Monteiro, Rodrigo, Flores-Vallejo, Rosario del Carmen, Heuvelmans, Maarten, Le, Thuy-Nga, Hendrickx, Antoni PA, Rosema, Sigrid, Maat, Ianthe, van Dijl, Jan Maarten, Bathoorn, Erik

“…Carbapenem-resistant Acinetobacter baumannii (CRAb) is an important pathogen causing serious nosocomial infections. We describe an outbreak of CRAb in an…”
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Predominance of CTX-M-15-producing ST131 strains among ESBL-producing Escherichia coli isolated from asylum seekers in the Netherlands by Louka, Christina, Ravensbergen, Sofanne J, Ott, Alewijn, Zhou, Xuewei, García-Cobos, Silvia, Friedrich, Alexander W, Pournaras, Spyros, Rosema, Sigrid, Rossen, John W, Stienstra, Ymkje, Bathoorn, Erik

“…Numerous studies show increased prevalence of MDR bacteria amongst asylum seekers, but data on the molecular profiles of such strains are limited. We aimed to…”
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Critical steps in clinical shotgun metagenomics for the concomitant detection and typing of microbial pathogens by Couto, Natacha, Schuele, Leonard, Raangs, Erwin C., Machado, Miguel P., Mendes, Catarina I., Jesus, Tiago F., Chlebowicz, Monika, Rosema, Sigrid, Ramirez, Mário, Carriço, João A., Autenrieth, Ingo B., Friedrich, Alex W., Peter, Silke, Rossen, John W.

“…High throughput sequencing has been proposed as a one-stop solution for diagnostics and molecular typing directly from patient samples, allowing timely and…”
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Epidemiological Typing of Serratia marcescens Isolates by Whole-Genome Multilocus Sequence Typing by Rossen, John W A, Dombrecht, Jill, Vanfleteren, Diederik, De Bruyne, Katrien, van Belkum, Alex, Rosema, Sigrid, Lokate, Mariette, Bathoorn, Erik, Reuter, Sandra, Grundmann, Hajo, Ertel, Julia, Higgins, Paul G, Seifert, Harald

“…is an opportunistic bacterial pathogen. It is notorious for its increasing antimicrobial resistance and its potential to cause outbreaks of colonization and…”
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Genetic Determinants in MRSA Carriage and Their Association with Decolonization Outcome by Westgeest, Annette C., Schippers, Emile F., Rosema, Sigrid, Fliss, Monika A., Kuijper, Ed J., Zwittink, Romy D., Lokate, Mariëtte, Wouthuyzen-Bakker, Marjan, Lambregts, Merel M. C., Bathoorn, Erik

“…Methicillin-resistant Staphylococcus aureus (MRSA) colonization increases the risk of infection. Response to decolonization treatment is highly variable and…”
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Sonication of heart valves detects more bacteria in infective endocarditis by Gomes, Anna, van Oosten, Marleen, Bijker, Kasper L. B., Boiten, Kathleen E., Salomon, Elisa N., Rosema, Sigrid, Rossen, John W. A., Natour, Ehsan, Douglas, Yvonne L., Kampinga, Greetje A., van Assen, Sander, Sinha, Bhanu

“…Optimal antimicrobial treatment of infective endocarditis requires identification and susceptibility patterns of pathogens. Sonication of explanted heart…”
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Maternal immunity against avian influenza H5N1 in chickens: limited protection and interference with vaccine efficacy by Maas, Riks, Rosema, Sigrid, Zoelen, Diana van, Venema, Sandra

“…After avian influenza (AI) vaccination, hens will produce progeny chickens with maternally derived AI-specific antibodies. In the present study we examined the…”
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Reprint of “Application of next generation sequencing in clinical microbiology and infection prevention” by Deurenberg, Ruud H., Bathoorn, Erik, Chlebowicz, Monika A., Couto, Natacha, Ferdous, Mithila, García-Cobos, Silvia, Kooistra-Smid, Anna M.D., Raangs, Erwin C., Rosema, Sigrid, Veloo, Alida C.M., Zhou, Kai, Friedrich, Alexander W., Rossen, John W.A.

“…•Next generation sequencing makes it possible to standardise methods.•Next generation sequencing has a large number of applications in clinical…”
Get full text