Search Results - "Ronquist, F."

Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology by Huelsenbeck, John P., Ronquist, Fredrik, Nielsen, Rasmus, Bollback, Jonathan P.

“…As a discipline, phylogenetics is becoming transformed by a flood of molecular data. These data allow broad questions to be asked about the history of life,…”
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Ancestral Areas and Parsimony by Ronquist, Fredrik

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Bayesian inference of character evolution by Ronquist, Fredrik

“…Much recent progress in evolutionary biology is based on the inference of ancestral states and past transformations in important traits on phylogenetic trees…”
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Phylogeny of the Eucoilinae (Hymenoptera: Cynipoidea: Figitidae) by Fontal-Cazalla, F.M., Buffington, M.L., Nordlander, G., Liljeblad, J., Ros-Farré, P., Nieves-Aldrey, J.L., Pujade-Villar, J., Ronquist, F.

“…The Eucoilinae are a diverse and important group of parasitoids of Diptera, particularly in the tropics, but they are poorly known systematically and their…”
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Phylogeny of the Eucoilinae (Hymenoptera: Cynipoidea: Figitidae) by Fontal-Cazalla, F.M., Buffington, M.L., Nordlander, G., Liljeblad, J., Ros-Farré, P., Nieves-Aldrey, J.L., Pujade-Villar, J., Ronquist, F.

“…The Eucoilinae are a diverse and important group of parasitoids of Diptera, particularly in the tropics, but they are poorly known systematically and their…”
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Evolution of parasitism among closely related species: phylogenetic relationships and the origin of inquilinism in gall wasps (Hymenoptera: Cynipidae) by Ronquist, F. (Uppsala University, Uppsala, Sweden)

“…A new term, agastoparasitism, is proposed for parasitism among closely related species. Cynipid inquilines are typical agastoparasites. They cannot induce…”
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Closing the gap between rocks and clocks using total-evidence dating by Ronquist, Fredrik, Lartillot, Nicolas, Phillips, Matthew J.

“…Total-evidence dating (TED) allows evolutionary biologists to incorporate a wide range of dating information into a unified statistical analysis. One might…”
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Morphology and evolution of the cynipoid egg (Hymenoptera) by VÅRDAL, H., SAHLÉN, G., RONQUIST, F.

“…We describe gross egg morphology and provide the first data on eggshell ultrastructure in cynipoids (Hymenoptera) based on species representing three…”
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Online tree expansion could help solve the problem of scalability in Bayesian phylogenetics by Truszkowski, Jakub, Perrigo, Allison, Broman, David, Ronquist, Fredrik, Antonelli, Alexandre

“…Abstract Bayesian phylogenetics is now facing a critical point. Over the last 20 years, Bayesian methods have reshaped phylogenetic inference and gained…”
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MrBayes 3: Bayesian phylogenetic inference under mixed models by Ronquist, Fredrik, Huelsenbeck, John P.

“…MrBayes 3 performs Bayesian phylogenetic analysis combining information from different data partitions or subsets evolving under different stochastic…”
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Southern Hemisphere Biogeography Inferred by Event-Based Models: Plant versus Animal Patterns by Sanmartín, Isabel, Ronquist, Fredrik, Cunningham, Cliff

“…The Southern Hemisphere has traditionally been considered as having a fundamentally vicariant history. The common trans-Pacific disjunctions are usually…”
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Inferring speciation and extinction rates under different sampling schemes by Höhna, Sebastian, Stadler, Tanja, Ronquist, Fredrik, Britton, Tom

“…The birth-death process is widely used in phylogenetics to model speciation and extinction. Recent studies have shown that the inferred rates are sensitive to…”
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Dispersal-Vicariance Analysis: A New Approach to the Quantification of Historical Biogeography by Ronquist, Fredrik

“…Quantification in historical biogeography has usually been based on the search for a single branching relationship among areas of endemism. Unlike organisms,…”
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A mixed relaxed clock model by Lartillot, Nicolas, Phillips, Matthew J., Ronquist, Fredrik

“…Over recent years, several alternative relaxed clock models have been proposed in the context of Bayesian dating. These models fall in two distinct categories:…”
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MRBAYES: Bayesian inference of phylogenetic trees by Huelsenbeck, John P., Ronquist, Fredrik

“…The program MRBAYES performs Bayesian inference of phylogeny using a variant of Markov chain Monte Carlo. Availability: MRBAYES, including the source code,…”
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ASV portal: an interface to DNA-based biodiversity data in the Living Atlas by Prager, Maria, Lundin, Daniel, Ronquist, Fredrik, Andersson, Anders F

“…The Living Atlas is an open source platform used to collect, visualise and analyse biodiversity data from multiple sources, and serves as the national…”
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Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference by Altekar, Gautam, Dwarkadas, Sandhya, Huelsenbeck, John P., Ronquist, Fredrik

“…Motivation: Bayesian estimation of phylogeny is based on the posterior probability distribution of trees. Currently, the only numerical method that can…”
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New solutions to old problems: widespread taxa, redundant distributions and missing areas in event–based biogeography by Sanmartín, I., Ronquist, F.

“…Area cladograms are widely used in historical biogeography to summarize area relationships. Constructing such cladograms is complicated by the existence of…”
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Bayesian Phylogenetic Analysis of Combined Data by Nylander, Johan A. A., Ronquist, Fredrik, Huelsenbeck, John P., Nieves-Aldrey, Joséluis, Buckley, Thomas

“…The recent development of Bayesian phylogenetic inference using Markov chain Monte Carlo (MCMC) techniques has facilitated the exploration of parameter-rich…”
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RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language by Höhna, Sebastian, Landis, Michael J., Heath, Tracy A., Boussau, Bastien, Lartillot, Nicolas, Moore, Brian R., Huelsenbeck, John P., Ronquist, Fredrik

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