Search Results - "Romy Chakraborty"

Enhanced crude oil depletion by constructed bacterial consortium comprising bioemulsifier producer and petroleum hydrocarbon degraders by Xia, Mingqian, Fu, Dafang, Chakraborty, Romy, Singh, Rajendra Prasad, Terry, Norman

“…[Display omitted] •Rhodococcus erythropolis OSDS1 produced highly stable bioemulsifier.•Emulsification capacity of bioemulsifier was diesel > mineral/crude…”
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Probing the active fraction of soil microbiomes using BONCAT-FACS by Couradeau, Estelle, Sasse, Joelle, Goudeau, Danielle, Nath, Nandita, Hazen, Terry C., Bowen, Ben P., Chakraborty, Romy, Malmstrom, Rex R., Northen, Trent R.

“…The ability to link soil microbial diversity to soil processes requires technologies that differentiate active microbes from extracellular DNA and dormant…”
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Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill by Bælum, Jacob, Borglin, Sharon, Chakraborty, Romy, Fortney, Julian L., Lamendella, Regina, Mason, Olivia U., Auer, Manfred, Zemla, Marcin, Bill, Markus, Conrad, Mark E., Malfatti, Stephanie A., Tringe, Susannah G., Holman, Hoi-Ying, Hazen, Terry C., Jansson, Janet K.

“…Summary The Deepwater Horizon oil spill resulted in a massive influx of hydrocarbons into the Gulf of Mexico (the Gulf). To better understand the fate of the…”
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Microbial Interactions With Dissolved Organic Matter Drive Carbon Dynamics and Community Succession by Wu, Xiaoqin, Wu, Liyou, Liu, Yina, Zhang, Ping, Li, Qinghao, Zhou, Jizhong, Hess, Nancy J, Hazen, Terry C, Yang, Wanli, Chakraborty, Romy

“…Knowledge of dynamic interactions between natural organic matter (NOM) and microbial communities is critical not only to delineate the routes of NOM…”
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Exometabolite niche partitioning among sympatric soil bacteria by Baran, Richard, Brodie, Eoin L., Mayberry-Lewis, Jazmine, Hummel, Eric, Da Rocha, Ulisses Nunes, Chakraborty, Romy, Bowen, Benjamin P., Karaoz, Ulas, Cadillo-Quiroz, Hinsby, Garcia-Pichel, Ferran, Northen, Trent R.

“…Soils are arguably the most microbially diverse ecosystems. Physicochemical properties have been associated with the maintenance of this diversity. Yet, the…”
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Succession of Hydrocarbon-Degrading Bacteria in the Aftermath of the Deepwater Horizon Oil Spill in the Gulf of Mexico by Dubinsky, Eric A, Conrad, Mark E, Chakraborty, Romy, Bill, Markus, Borglin, Sharon E, Hollibaugh, James T, Mason, Olivia U, M. Piceno, Yvette, Reid, Francine C, Stringfellow, William T, Tom, Lauren M, Hazen, Terry C, Andersen, Gary L

“…The Deepwater Horizon oil spill produced large subsurface plumes of dispersed oil and gas in the Gulf of Mexico that stimulated growth of psychrophilic,…”
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Emerging Trends in Biological Treatment of Wastewater From Unconventional Oil and Gas Extraction by Acharya, Shwetha M, Chakraborty, Romy, Tringe, Susannah G

“…Unconventional oil and gas exploration generates an enormous quantity of wastewater, commonly referred to as flowback and produced water (FPW). Limited…”
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Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria by Hazen, Terry C., Dubinsky, Eric A., DeSantis, Todd Z., Andersen, Gary L., Piceno, Yvette M., Singh, Navjeet, Jansson, Janet K., Probst, Alexander, Borglin, Sharon E., Fortney, Julian L., Stringfellow, William T., Bill, Markus, Conrad, Mark E., Tom, Lauren M., Chavarria, Krystle L., Alusi, Thana R., Lamendella, Regina, Joyner, Dominique C., Spier, Chelsea, Baelum, Jacob, Auer, Manfred, Zemla, Mardn L., Chakraborty, Romy, Sonnenthal, Eric L., D'haeseleer, Patrik, Holman, Hoi-Ying N., Osman, Shariff, Lu, Zhenmei, Van Nostrand, Joy D., Deng, Ye, Zhou, Jizhong, Mason, Olivia U.

“…The biological effects and expected fate of the vast amount of oil in the Gulf of Mexico from the Deepwater Horizon blowout are unknown owing to the depth and…”
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Culturing of "Unculturable" Subsurface Microbes: Natural Organic Carbon Source Fuels the Growth of Diverse and Distinct Bacteria From Groundwater by Wu, Xiaoqin, Spencer, Sarah, Gushgari-Doyle, Sara, Yee, Mon Oo, Voriskova, Jana, Li, Yifan, Alm, Eric J, Chakraborty, Romy

“…Recovery and cultivation of diverse environmentally-relevant microorganisms from the terrestrial subsurface remain a challenge despite recent advances in…”
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Systematic discovery of pseudomonad genetic factors involved in sensitivity to tailocins by Carim, Sean, Azadeh, Ashley L., Kazakov, Alexey E., Price, Morgan N., Walian, Peter J., Lui, Lauren M., Nielsen, Torben N., Chakraborty, Romy, Deutschbauer, Adam M., Mutalik, Vivek K., Arkin, Adam P.

“…Tailocins are bactericidal protein complexes produced by a wide variety of bacteria that kill closely related strains and may play a role in microbial…”
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Specialized Plant Growth Chamber Designs to Study Complex Rhizosphere Interactions by Yee, Mon Oo, Kim, Peter, Li, Yifan, Singh, Anup K, Northen, Trent R, Chakraborty, Romy

“…The rhizosphere is a dynamic ecosystem shaped by complex interactions between plant roots, soil, microbial communities and other micro- and macro-fauna…”
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Plant Growth Promotion Diversity in Switchgrass-Colonizing, Diazotrophic Endophytes by Gushgari-Doyle, Sara, Schicklberger, Marcus, Li, Yifan V., Walker, Robert, Chakraborty, Romy

“…Endophytic nitrogen-fixing (diazotrophic) bacteria are essential members of the microbiome of switchgrass ( Panicum virgatum ), considered to be an important…”
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Developing stable, simplified, functional consortia from Brachypodium rhizosphere for microbial application in sustainable agriculture by Chen, Mingfei, Acharya, Shwetha M, Yee, Mon Oo, Cabugao, Kristine Grace M, Chakraborty, Romy

“…The rhizosphere microbiome plays a crucial role in supporting plant productivity and ecosystem functioning by regulating nutrient cycling, soil integrity, and…”
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High-throughput protein characterization by complementation using DNA barcoded fragment libraries by Biggs, Bradley W, Price, Morgan N, Lai, Dexter, Escobedo, Jasmine, Fortanel, Yuridia, Huang, Yolanda Y, Kim, Kyoungmin, Trotter, Valentine V, Kuehl, Jennifer V, Lui, Lauren M, Chakraborty, Romy, Deutschbauer, Adam M, Arkin, Adam P

“…Our ability to predict, control, or design biological function is fundamentally limited by poorly annotated gene function. This can be particularly challenging…”
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Microbial Phosphorus Mobilization Strategies Across a Natural Nutrient Limitation Gradient and Evidence for Linkage With Iron Solubilization Traits by Wang, Shi, Walker, Robert, Schicklberger, Marcus, Nico, Peter S., Fox, Patricia M., Karaoz, Ulas, Chakraborty, Romy, Brodie, Eoin L.

“…Microorganisms have evolved several mechanisms to mobilize and mineralize occluded and insoluble phosphorus (P), thereby promoting plant growth in terrestrial…”
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Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community by Hemme, Christopher L, Green, Stefan J, Rishishwar, Lavanya, Prakash, Om, Pettenato, Angelica, Chakraborty, Romy, Deutschbauer, Adam M, Van Nostrand, Joy D, Wu, Liyou, He, Zhili, Jordan, I King, Hazen, Terry C, Arkin, Adam P, Kostka, Joel E, Zhou, Jizhong

“…Unraveling the drivers controlling the response and adaptation of biological communities to environmental change, especially anthropogenic activities, is a…”
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Characterizing Natural Organic Matter Transformations by Microbial Communities in Terrestrial Subsurface Ecosystems: A Critical Review of Analytical Techniques and Challenges by Cabugao, Kristine Grace M, Gushgari-Doyle, Sara, Chacon, Stephany S, Wu, Xiaoqin, Bhattacharyya, Amrita, Bouskill, Nicholas, Chakraborty, Romy

“…Determining the mechanisms, traits, and pathways that regulate microbial transformation of natural organic matter (NOM) is critical to informing our…”
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A Defined Medium for Cultivation and Exometabolite Profiling of Soil Bacteria by de Raad, Markus, Li, Yifan V, Kuehl, Jennifer V, Andeer, Peter F, Kosina, Suzanne M, Hendrickson, Andrew, Saichek, Nicholas R, Golini, Amber N, Han, La Zhen, Wang, Ying, Bowen, Benjamin P, Deutschbauer, Adam M, Arkin, Adam P, Chakraborty, Romy, Northen, Trent R

“…Exometabolomics is an approach to assess how microorganisms alter, or react to their environments through the depletion and production of metabolites. It…”
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Measurement of Volatile Compounds for Real-Time Analysis of Soil Microbial Metabolic Response to Simulated Snowmelt by Kim, Junhyeong, Goldstein, Allen H., Chakraborty, Romy, Jardine, Kolby, Weber, Robert, Sorensen, Patrick O., Wang, Shi, Faybishenko, Boris, Misztal, Pawel K., Brodie, Eoin L.

“…Snowmelt dynamics are a significant determinant of microbial metabolism in soil and regulate global biogeochemical cycles of carbon and nutrients by creating…”
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Anaerobic Degradation of Benzene, Toluene, Ethylbenzene, and Xylene Compounds by Dechloromonas Strain RCB by CHAKRABORTY, Romy, O'CONNOR, Susan M, CHAN, Emily, COATES, John D

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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