Search Results - "Riit, Taavi"

Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi by Tedersoo, Leho, Anslan, Sten, Bahram, Mohammad, Põlme, Sergei, Riit, Taavi, Liiv, Ingrid, Kõljalg, Urmas, Kisand, Veljo, Nilsson, Henrik, Hildebrand, Falk, Bork, Peer, Abarenkov, Kessy

“…Rapid development of high-throughput (HTS) molecular identification methods has revolutionized our knowledge about taxonomic diversity and ecology of fungi…”
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Soil mycobiomes in native European aspen forests and hybrid aspen plantations have a similar fungal richness but different compositions, mainly driven by edaphic and floristic factors by Rähn, Elisabeth, Lutter, Reimo, Riit, Taavi, Tullus, Tea, Tullus, Arvo, Tedersoo, Leho, Drenkhan, Rein, Tullus, Hardi

“…The cultivation of short-rotation tree species on non-forest land is increasing due to the growing demand for woody biomass for the future bioeconomy and to…”
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Molecular Characterization of African Swine Fever Virus Isolates in Estonia in 2014–2019 by Vilem, Annika, Nurmoja, Imbi, Niine, Tarmo, Riit, Taavi, Nieto, Raquel, Viltrop, Arvo, Gallardo, Carmina

“…After the extensive spread of the African swine fever virus (ASFV) genotype II in Eastern Europe, the first case of African swine fever (ASF) in Estonia was…”
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Highly Clonal Structure and Abundance of One Haplotype Characterise the Diplodia sapinea Populations in Europe and Western Asia by Adamson, Kalev, Laas, Marili, Blumenstein, Kathrin, Busskamp, Johanna, Langer, Gitta J., Klavina, Darta, Kaur, Anu, Maaten, Tiit, Mullett, Martin S., Müller, Michael M., Ondrušková, Emília, Padari, Allar, Pilt, Enn, Riit, Taavi, Solheim, Halvor, Soonvald, Liina, Tedersoo, Leho, Terhonen, Eeva, Drenkhan, Rein

“…Diplodia sapinea is a cosmopolitan endophyte and opportunistic pathogen having occurred on several conifer species in Europe for at least 200 years. In Europe,…”
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Oomycete Soil Diversity Associated with Betula and Alnus in Forests and Urban Settings in the Nordic–Baltic Region by Riit, Taavi, Cleary, Michelle, Adamson, Kalev, Blomquist, Mimmi, Burokienė, Daiva, Marčiulynienė, Diana, Oliva, Jonàs, Poimala, Anna, Redondo, Miguel Angel, Strømeng, Gunn Mari, Talgø, Venche, Tedersoo, Leho, Thomsen, Iben Margrete, Uimari, Anne, Witzell, Johanna, Drenkhan, Rein

“…This study aimed to determine the differences and drivers of oomycete diversity and community composition in alder- and birch-dominated park and natural forest…”
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Corrigendum for: "Oomycete-specific ITS primers for identification and metabarcoding" published in MycoKeys, doi: 10.3897/mycokeys.14.9244 by Riit, Taavi, Tedersoo, Leho, Drenkhan, Rein, Runno-Paurson, Eve, Kokko, Harri, Anslan, Sten

“…[This corrects the article DOI: 10.3897/mycokeys.14.9244.]…”
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An investigation of Inonotus obliquus in Estonia: Its distribution, abundance of conks, rot extent in infected trees, and peculiarities of basidiospore dispersal by Adamson, Kalev, Vester, Marili, Kütt, Karin, Riit, Taavi, Padari, Allar, Jürimaa, Katrin, Drenkhan, Rein

“…Inonotus obliquus, a well-known forest fungal pathogen, started gaining attention for its potential medicinal uses. Known as Chaga, the fungus has become…”
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Global diversity and geography of soil fungi by Tedersoo, Leho, Bahram, Mohammad, Põlme, Sergei, Kõljalg, Urmas, Yorou, Nourou S., Wijesundera, Ravi, Ruiz, Luis Villarreal, Vasco-Palacios, Aída M., Thu, Pham Quang, Suija, Ave, Smith, Matthew E., Sharp, Cathy, Saluveer, Erki, Saitta, Alessandro, Rosas, Miguel, Riit, Taavi, Ratkowsky, David, Pritsch, Karin, Põldmaa, Kadri, Piepenbring, Meike, Phosri, Cherdchai, Peterson, Marko, Parts, Kaarin, Pärtel, Kadri, Otsing, Eveli, Nouhra, Eduardo, Njouonkou, André L., Nilsson, R. Henrik, Morgado, Luis N., Mayor, Jordan, May, Tom W., Majuakim, Luiza, Lodge, D. Jean, Lee, Su See, Larsson, Karl-Henrik, Kohout, Petr, Hosaka, Kentaro, Hiiesalu, Indrek, Henkel, Terry W., Harend, Helery, Guo, Liang-dong, Greslebin, Alina, Grelet, Gwen, Geml, Jozsef, Gates, Genevieve, Dunstan, William, Dunk, Chris, Drenkhan, Rein, Dearnaley, John, De Kesel, André, Dang, Tan, Chen, Xin, Buegger, Franz, Brearley, Francis Q., Bonito, Gregory, Anslan, Sten, Abell, Sandra, Abarenkov, Kessy

“…Fungi play major roles in ecosystem processes, but the determinants of fungal diversity and biogeographic patterns remain poorly understood. Using DNA…”
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Soil fungal diversity of birch plantations on former agricultural land resembles naturally regenerated birch stands on agricultural and forest land by Lutter, Reimo, Riit, Taavi, Agan, Ahto, Rähn, Elisabeth, Tullus, Arvo, Sopp, Reeno, Ots, Katri, Kaivapalu, Marju, Täll, Kristjan, Tullus, Tea, Tedersoo, Leho, Drenkhan, Rein, Tullus, Hardi

“…•Forest plantations are often reported to host lower biodiversity than natural forests.•The response of soil fungi to land use and birch regeneration methods…”
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Oomycete-specific ITS primers for identification and metabarcoding by Riit, Taavi, Tedersoo, Leho, Drenkhan, Rein, Runno-Paurson, Eve, Kokko, Harri, Anslan, Sten

“…Microbial metabarcoding studies using high throughput sequencing technologies generate unprecedented amounts of DNA sequence data and make it possible to…”
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Response to Comment on “Global diversity and geography of soil fungi” by Tedersoo, Leho, Bahram, Mohammad, Põlme, Sergei, Anslan, Sten, Riit, Taavi, Kõljalg, Urmas, Nilsson, R. Henrik, Hildebrand, Falk, Abarenkov, Kessy

“…Schadt and Rosling (Technical Comment, 26 June 2015, p. 1438) argue that primer-template mismatches neglected the fungal class Archaeorhizomycetes in a global…”
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The effect of stump harvesting on tree growth and the infection of root rot in young Norway spruce stands in hemiboreal Estonia by Aosaar, Jürgen, Drenkhan, Tiia, Adamson, Kalev, Aun, Kristiina, Becker, Hardo, Buht, Mikko, Drenkhan, Rein, Fjodorov, Merit, Jürimaa, Katrin, Morozov, Gunnar, Pihlak, Laura, Piiskop, Kätlin, Riit, Taavi, Varik, Mats, Väär, Rait, Uri, Marek, Uri, Veiko

“…•Positive effect of stump removal on the height growth of the trees was revealed.•Stump removal had no effect on the nutritional status of the needles of young…”
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Improving ITS sequence data for identification of plant pathogenic fungi by Nilsson, R. Henrik, Hyde, Kevin D., Pawłowska, Julia, Ryberg, Martin, Tedersoo, Leho, Aas, Anders Bjørnsgard, Alias, Siti A., Alves, Artur, Anderson, Cajsa Lisa, Antonelli, Alexandre, Arnold, A. Elizabeth, Bahnmann, Barbara, Bahram, Mohammad, Bengtsson-Palme, Johan, Berlin, Anna, Branco, Sara, Chomnunti, Putarak, Dissanayake, Asha, Drenkhan, Rein, Friberg, Hanna, Frøslev, Tobias Guldberg, Halwachs, Bettina, Hartmann, Martin, Henricot, Beatrice, Jayawardena, Ruvishika, Jumpponen, Ari, Kauserud, Håvard, Koskela, Sonja, Kulik, Tomasz, Liimatainen, Kare, Lindahl, Björn D., Lindner, Daniel, Liu, Jian-Kui, Maharachchikumbura, Sajeewa, Manamgoda, Dimuthu, Martinsson, Svante, Neves, Maria Alice, Niskanen, Tuula, Nylinder, Stephan, Pereira, Olinto Liparini, Pinho, Danilo Batista, Porter, Teresita M., Queloz, Valentin, Riit, Taavi, Sánchez-García, Marisol, de Sousa, Filipe, Stefańczyk, Emil, Tadych, Mariusz, Takamatsu, Susumu, Tian, Qing, Udayanga, Dhanushka, Unterseher, Martin, Wang, Zheng, Wikee, Saowanee, Yan, Jiye, Larsson, Ellen, Larsson, Karl-Henrik, Kõljalg, Urmas, Abarenkov, Kessy

“…Summary Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours. These taxa…”
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Oomycete Soil Diversity Associated with IBetula/I and IAlnus/I in Forests and Urban Settings in the Nordic–Baltic Region by Riit, Taavi, Cleary, Michelle, Adamson, Kalev, Blomquist, Mimmi, Burokienė, Daiva, Marčiulynienė, Diana, Oliva, Jonàs, Poimala, Anna, Redondo, Miguel Angel, Strømeng, Gunn Mari, Talgø, Venche, Tedersoo, Leho, Thomsen, Iben Margrete, Uimari, Anne, Witzell, Johanna, Drenkhan, Rein

“…This study aimed to determine the differences and drivers of oomycete diversity and community composition in alder- and birch-dominated park and natural forest…”
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Fungal biogeography. Global diversity and geography of soil fungi by Tedersoo, Leho, Bahram, Mohammad, Põlme, Sergei, Kõljalg, Urmas, Yorou, Nourou S, Wijesundera, Ravi, Villarreal Ruiz, Luis, Vasco-Palacios, Aída M, Thu, Pham Quang, Suija, Ave, Smith, Matthew E, Sharp, Cathy, Saluveer, Erki, Saitta, Alessandro, Rosas, Miguel, Riit, Taavi, Ratkowsky, David, Pritsch, Karin, Põldmaa, Kadri, Piepenbring, Meike, Phosri, Cherdchai, Peterson, Marko, Parts, Kaarin, Pärtel, Kadri, Otsing, Eveli, Nouhra, Eduardo, Njouonkou, André L, Nilsson, R Henrik, Morgado, Luis N, Mayor, Jordan, May, Tom W, Majuakim, Luiza, Lodge, D Jean, Lee, Su See, Larsson, Karl-Henrik, Kohout, Petr, Hosaka, Kentaro, Hiiesalu, Indrek, Henkel, Terry W, Harend, Helery, Guo, Liang-dong, Greslebin, Alina, Grelet, Gwen, Geml, Jozsef, Gates, Genevieve, Dunstan, William, Dunk, Chris, Drenkhan, Rein, Dearnaley, John, De Kesel, André, Dang, Tan, Chen, Xin, Buegger, Franz, Brearley, Francis Q, Bonito, Gregory, Anslan, Sten, Abell, Sandra, Abarenkov, Kessy

“…Fungi play major roles in ecosystem processes, but the determinants of fungal diversity and biogeographic patterns remain poorly understood. Using DNA…”
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FUNGAL BIOGEOGRAPHY. Response to Comment on "Global diversity and geography of soil fungi" by Tedersoo, Leho, Bahram, Mohammad, Põlme, Sergei, Anslan, Sten, Riit, Taavi, Kõljalg, Urmas, Nilsson, R Henrik, Hildebrand, Falk, Abarenkov, Kessy

“…Schadt and Rosling (Technical Comment, 26 June 2015, p. 1438) argue that primer-template mismatches neglected the fungal class Archaeorhizomycetes in a global…”
Get full text