Search Results - "Reynolds, Richard C"

LayNii: A software suite for layer-fMRI by Huber, Laurentius (Renzo), Poser, Benedikt A., Bandettini, Peter A., Arora, Kabir, Wagstyl, Konrad, Cho, Shinho, Goense, Jozien, Nothnagel, Nils, Morgan, Andrew Tyler, van den Hurk, Job, Müller, Anna K, Reynolds, Richard C., Glen, Daniel R., Goebel, Rainer, Gulban, Omer Faruk

“…•A new software toolbox is introduced for layer-specific functional MRI: LayNii.•LayNii is a suite of command-line executable C++ programs for Linux, Windows,…”
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Highlight results, don't hide them: Enhance interpretation, reduce biases and improve reproducibility by Taylor, Paul A., Reynolds, Richard C., Calhoun, Vince, Gonzalez-Castillo, Javier, Handwerker, Daniel A., Bandettini, Peter A., Mejia, Amanda F., Chen, Gang

“…•Most studies do not present all results of their analysis, hiding subthreshold ones.•Hiding results negatively affects the interpretation and understanding of…”
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Neural substrates of classically conditioned fear-generalization in humans: a parametric fMRI study by Lissek, Shmuel, Bradford, Daniel E, Alvarez, Ruben P, Burton, Philip, Espensen-Sturges, Tori, Reynolds, Richard C, Grillon, Christian

“…Recent research on classical fear-conditioning in the anxiety disorders has identified overgeneralization of conditioned fear as an important conditioning…”
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Neural Mechanisms of Frustration in Chronically Irritable Children by Deveney, Christen M., Connolly, Megan E., Haring, Catherine T., Bones, Brian L., Reynolds, Richard C., Kim, Pilyoung, Pine, Daniel S., Leibenluft, Ellen

“…For severely and chronically irritable children, frustration during a feedback game revealed striking deactivation in the brain regions associated with spatial…”
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Quality control practices in FMRI analysis: Philosophy, methods and examples using AFNI by Reynolds, Richard C, Taylor, Paul A, Glen, Daniel R

“…Quality control (QC) is a necessary, but often an under-appreciated, part of FMRI processing. Here we describe procedures for performing QC on acquired or…”
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BOLD Response is more than just magnitude: Improving detection sensitivity through capturing hemodynamic profiles by Chen, Gang, Taylor, Paul A., Reynolds, Richard C., Leibenluft, Ellen, Pine, Daniel S., Brotman, Melissa A., Pagliaccio, David, Haller, Simone P.

“…•Large HRF shape heterogeneity exists across the brain, individuals, conditions, and groups.•Canonical HRF may suffer from under-fitting and information…”
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Effective Preprocessing Procedures Virtually Eliminate Distance-Dependent Motion Artifacts in Resting State FMRI by Gotts, Stephen J., Jo, Hang Joon, Reynolds, Richard C., Bandettini, Peter A., Martin, Alex, Cox, Robert W., Saad, Ziad S.

“…Artifactual sources of resting-state (RS) FMRI can originate from head motion, physiology, and hardware. Of these sources, motion has received considerable…”
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Comparison of heritability estimates on resting state fMRI connectivity phenotypes using the ENIGMA analysis pipeline by Adhikari, Bhim M, Jahanshad, Neda, Shukla, Dinesh, Glahn, David C, Blangero, John, Fox, Peter T, Reynolds, Richard C, Cox, Robert W, Fieremans, Els, Veraart, Jelle, Novikov, Dmitry S, Nichols, Thomas E, Hong, L Elliot, Thompson, Paul M, Kochunov, Peter

“…We measured and compared heritability estimates for measures of functional brain connectivity extracted using the Enhancing Neuroimaging Genetics through…”
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Neural Markers in Pediatric Bipolar Disorder and Familial Risk for Bipolar Disorder by Wiggins, Jillian Lee, PhD, Brotman, Melissa A., PhD, Adleman, Nancy E., PhD, Kim, Pilyoung, PhD, Wambach, Caroline G., BS, Reynolds, Richard C., MS, Chen, Gang, PhD, Towbin, Kenneth, MD, Pine, Daniel S., MD, Leibenluft, Ellen, MD

“…Abstract Objective Bipolar disorder (BD) is highly heritable. Neuroimaging studies comparing unaffected youth at high familial risk for BD (i.e., those with a…”
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Editorial: Demonstrating quality control (QC) procedures in fMRI by Taylor, Paul A, Glen, Daniel R, Reynolds, Richard C, Basavaraj, Arshitha, Moraczewski, Dustin, Etzel, Joset A

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Functional connectivity and laterality of the motor and sensory components in the volitional swallowing network by Lowell, Soren Y., Reynolds, Richard C., Chen, Gang, Horwitz, Barry, Ludlow, Christy L.

“…Functional neuroimaging has shown that multiple brain regions are active during volitional swallowing. Little is known, however, about which regions integrate…”
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Methods for cleaning the BOLD fMRI signal by Caballero-Gaudes, César, Reynolds, Richard C.

“…Blood oxygen-level-dependent functional magnetic resonance imaging (BOLD fMRI) has rapidly become a popular technique for the investigation of brain function…”
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Instructions and experiential learning have similar impacts on pain and pain-related brain responses but produce dissociations in value-based reversal learning by Atlas, Lauren Y, Dildine, Troy C, Palacios-Barrios, Esther E, Yu, Qingbao, Reynolds, Richard C, Banker, Lauren A, Grant, Shara S, Pine, Daniel S

“…Recent data suggest that interactions between systems involved in higher order knowledge and associative learning drive responses during value-based learning…”
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Functional Neuroimaging During Asleep DBS Surgery: A Proof of Concept Study by Sammartino, Francesco, Taylor, Paul, Chen, Gang, Reynolds, Richard C., Glen, Daniel, Krishna, Vibhor

“…Object: A real-time functional magnetic resonance imaging (fMRI) feedback during ventral intermediate nucleus (VIM) deep brain stimulation (DBS) under general…”
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Sensory stimulation activates both motor and sensory components of the swallowing system by Lowell, Soren Y., Poletto, Christopher J., Knorr-Chung, Bethany R., Reynolds, Richard C., Simonyan, Kristina, Ludlow, Christy L.

“…Volitional swallowing in humans involves the coordination of both brainstem and cerebral swallowing control regions. Peripheral sensory inputs are necessary…”
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Beware (Surprisingly Common) Left-Right Flips in Your MRI Data: An Efficient and Robust Method to Check MRI Dataset Consistency Using AFNI by Glen, Daniel R., Taylor, Paul A., Buchsbaum, Bradley R., Cox, Robert W., Reynolds, Richard C.

“…Knowing the difference between left and right is generally assumed throughout the brain MRI research community. However, we note widespread occurrences of…”
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Temporal similarity perfusion mapping: A standardized and model-free method for detecting perfusion deficits in stroke by Song, Sunbin, Bokkers, Reinoud P H, Luby, Marie, Edwardson, Matthew A, Brown, Tyler, Shah, Shreyansh, Cox, Robert W, Saad, Ziad S, Reynolds, Richard C, Glen, Daniel R, Cohen, Leonardo G, Latour, Lawrence L

“…Interpretation of the extent of perfusion deficits in stroke MRI is highly dependent on the method used for analyzing the perfusion-weighted signal intensity…”
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fMRI clustering and false-positive rates by Cox, Robert W., Chen, Gang, Glen, Daniel R., Reynolds, Richard C., Taylor, Paul A.

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FMRI Clustering in AFNI: False-Positive Rates Redux by Cox, Robert W, Chen, Gang, Glen, Daniel R, Reynolds, Richard C, Taylor, Paul A

“…Recent reports of inflated false-positive rates (FPRs) in FMRI group analysis tools by Eklund and associates in 2016 have become a large topic within (and…”
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SUMA by Saad, Ziad S., Reynolds, Richard C.

“…Surface-based brain imaging analysis offers the advantages of preserving the topology of cortical activation, increasing statistical power of group-level…”
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