Search Results - "Reed, Samantha B"

Shewanella oneidensis MR-1 nanowires are outer membrane and periplasmic extensions of the extracellular electron transport components by Pirbadian, Sahand, Barchinger, Sarah E., Leung, Kar Man, Byun, Hye Suk, Jangir, Yamini, Bouhenni, Rachida A., Reed, Samantha B., Romine, Margaret F., Saffarini, Daad A., Shi, Liang, Gorby, Yuri A., Golbeck, John H., El-Naggar, Mohamed Y.

“…Bacterial nanowires offer an extracellular electron transport (EET) pathway for linking the respiratory chain of bacteria to external surfaces, including…”
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Current Production and Metal Oxide Reduction by Shewanella oneidensis MR-1 Wild Type and Mutants by Bretschger, Orianna, Obraztsova, Anna, Sturm, Carter A, Chang, In Seop, Gorby, Yuri A, Reed, Samantha B, Culley, David E, Reardon, Catherine L, Barua, Soumitra, Romine, Margaret F, Zhou, Jizhong, Beliaev, Alexander S, Bouhenni, Rachida, Saffarini, Daad, Mansfeld, Florian, Kim, Byung-Hong, Fredrickson, James K, Nealson, Kenneth H

“…Shewanella oneidensis MR-1 is a gram-negative facultative anaerobe capable of utilizing a broad range of electron acceptors, including several solid…”
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Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization by Pinchuk, Grigory E, Rodionov, Dmitry A, Yang, Chen, Li, Xiaoqing, Osterman, Andrei L, Dervyn, Etienne, Geydebrekht, Oleg V, Reed, Samantha B, Romine, Margaret F, Collart, Frank R, Scott, James H, Fredrickson, Jim K, Beliaev, Alexander S

“…The ability to use lactate as a sole source of carbon and energy is one of the key metabolic signatures of Shewanellae, a diverse group of dissimilatory…”
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Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation by Pinchuk, Grigoriy E, Hill, Eric A, Geydebrekht, Oleg V, De Ingeniis, Jessica, Zhang, Xiaolin, Osterman, Andrei, Scott, James H, Reed, Samantha B, Romine, Margaret F, Konopka, Allan E, Beliaev, Alexander S, Fredrickson, Jim K, Reed, Jennifer L

“…Shewanellae are gram-negative facultatively anaerobic metal-reducing bacteria commonly found in chemically (i.e., redox) stratified environments. Occupying…”
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Hydrogenase- and outer membrane c-type cytochrome-facilitated reduction of technetium(VII) by Shewanella oneidensis MR-1 by Marshall, Matthew J., Plymale, Andrew E., Kennedy, David W., Shi, Liang, Wang, Zheming, Reed, Samantha B., Dohnalkova, Alice C., Simonson, Cody J., Liu, Chongxuan, Saffarini, Daad A., Romine, Margaret F., Zachara, John M., Beliaev, Alexander S., Fredrickson, James K.

“…Summary Pertechnetate, 99Tc(VII)O4–, is a highly mobile radionuclide contaminant at US Department of Energy sites that can be enzymatically reduced by a range…”
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Investigations of structure and metabolism within Shewanella oneidensis MR-1 biofilms by McLean, Jeffrey S., Majors, Paul D., Reardon, Catherine L., Bilskis, Christina L., Reed, Samantha B., Romine, Margaret F., Fredrickson, James K.

“…Biofilms possess spatially and temporally varying metabolite concentration profiles at the macroscopic and microscopic scales. This results in varying growth…”
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Electrically Conductive Bacterial Nanowires Produced by Shewanella oneidensis Strain MR-1 and Other Microorganisms by Gorby, Yuri A., Yanina, Svetlana, McLean, Jeffrey S., Rosso, Kevin M., Moyles, Dianne, Dohnalkova, Alice, Beveridge, Terry J., Chang, In Seop, Kim, Byung Hong, Kim, Kyung Shik, Culley, David E., Reed, Samantha B., Romine, Margaret F., Saffarini, Daad A., Hill, Eric A., Shi, Liang, Elias, Dwayne A., Kennedy, David W., Pinchuk, Grigoriy, Watanabe, Kazuya, Ishii, Shun'ichi, Logan, Bruce, Nealson, Kenneth H., Fredrickson, Jim K.

“…Shewanella oneidensis MR-1 produced electrically conductive pilus-like appendages called bacterial nanowires in direct response to electron-acceptor…”
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Reduction of nitrate in Shewanella oneidensis depends on atypical NAP and NRF systems with NapB as a preferred electron transport protein from CymA to NapA by Gao, Haichun, Yang, Zamin K, Barua, Soumitra, Reed, Samantha B, Romine, Margaret F, Nealson, Kenneth H, Fredrickson, James K, Tiedje, James M, Zhou, Jizhong

“…In the genome of Shewanella oneidensis , a napDAGHB gene cluster encoding periplasmic nitrate reductase (NapA) and accessory proteins and an nrfA gene encoding…”
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c-Type cytochrome-dependent formation of U(IV) nanoparticles by Shewanella oneidensis by Marshall, Matthew J, Beliaev, Alexander S, Dohnalkova, Alice C, Kennedy, David W, Shi, Liang, Wang, Zheming, Boyanov, Maxim I, Lai, Barry, Kemner, Kenneth M, McLean, Jeffrey S, Reed, Samantha B, Culley, David E, Bailey, Vanessa L, Simonson, Cody J, Saffarini, Daad A, Romine, Margaret F, Zachara, John M, Fredrickson, James K

“…Modern approaches for bioremediation of radionuclide contaminated environments are based on the ability of microorganisms to effectively catalyze changes in…”
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Manganese sulfide formation via concomitant microbial manganese oxide and thiosulfate reduction by Lee, Ji-Hoon, Kennedy, David W., Dohnalkova, Alice, Moore, Dean A., Nachimuthu, Ponnusamy, Reed, Samantha B., Fredrickson, James K.

“…Summary The dissimilatory metal‐reducing bacterium, Shewanella oneidensis MR‐1 produced γ‐MnS (rambergite) nanoparticles during the concurrent reduction of…”
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Molecular characterization of a novel Staphylococcus aureus serine protease operon by REED, Samantha B, WESSON, Carla A, LIOU, Linda E, TRUMBLE, William R, SCHLIEVERT, Patrick M, BOHACH, Gregory A, BAYLES, Kenneth W

“…The present study identified and characterized a unique operon (spl) encoding six serine protease-like proteins. In addition, native Spl proteins were isolated…”
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Identification of Nicotinamide Mononucleotide Deamidase of the Bacterial Pyridine Nucleotide Cycle Reveals a Novel Broadly Conserved Amidohydrolase Family by Galeazzi, Luca, Bocci, Paola, Amici, Adolfo, Brunetti, Lucia, Ruggieri, Silverio, Romine, Margaret, Reed, Samantha, Osterman, Andrei L., Rodionov, Dmitry A., Sorci, Leonardo, Raffaelli, Nadia

“…The pyridine nucleotide cycle is a network of salvage and recycling routes maintaining homeostasis of NAD(P) cofactor pool in the cell. Nicotinamide…”
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Genomic encyclopedia of sugar utilization pathways in the Shewanella genus by Rodionov, Dmitry A, Yang, Chen, Li, Xiaoqing, Rodionova, Irina A, Wang, Yanbing, Obraztsova, Anna Y, Zagnitko, Olga P, Overbeek, Ross, Romine, Margaret F, Reed, Samantha, Fredrickson, James K, Nealson, Kenneth H, Osterman, Andrei L

“…Carbohydrates are a primary source of carbon and energy for many bacteria. Accurate projection of known carbohydrate catabolic pathways across diverse bacteria…”
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Control of proteobacterial central carbon metabolism by the HexR transcriptional regulator: a case study in Shewanella oneidensis by Leyn, Semen A, Li, Xiaoqing, Zheng, Qingxiang, Novichkov, Pavel S, Reed, Samantha, Romine, Margaret F, Fredrickson, James K, Yang, Chen, Osterman, Andrei L, Rodionov, Dmitry A

“…Bacteria exploit multiple mechanisms for controlling central carbon metabolism (CCM). Thus, a bioinformatic analysis together with some experimental data…”
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The octaheme SirA catalyses dissimilatory sulfite reduction in Shewanella oneidensis MR-1 by Shirodkar, Sheetal, Reed, Samantha B., Romine, Margaret F., Saffarini, Daad

“…Shewanella oneidensis MR-1 is a metal reducer that uses a large number of electron acceptors that include thiosulfate, polysulfide, and sulfite. The enzyme…”
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Bacterial Nanowires of Shewanella Oneidensis MR-1 are Outer Membrane and Periplasmic Extensions of the Extracellular Electron Transport Components by Pirbadian, Sahand, Barchinger, Sarah E., Leung, Kar Man, Byun, Hye Suk, Jangir, Yamini, Bouhenni, Rachida A., Reed, Samantha B., Romine, Margaret F., Saffarini, Daad A., Shi, Liang, Gorby, Yuri A., Golbeck, John H., El-Naggar, Mohamed Y.

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Impacts of Shewanella oneidensis c-type cytochromes on aerobic and anaerobic respiration by Gao, Haichun, Barua, Soumitra, Liang, Yili, Wu, Lin, Dong, Yangyang, Reed, Samantha, Chen, Jingrong, Culley, Dave, Kennedy, David, Yang, Yunfeng, He, Zhili, Nealson, Kenneth H., Fredrickson, James K., Tiedje, James M., Romine, Margaret, Zhou, Jizhong

“…Summary Shewanella are renowned for their ability to utilize a wide range of electron acceptors (EA) for respiration, which has been partially accredited to…”
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Role of outer membrane c-type cytochromes MtrC and OmcA in Shewanella oneidensis MR-1 cell production, accumulation, and detachment during respiration on hematite by MITCHELL, A. C., PETERSON, L., REARDON, C. L., REED, S. B., CULLEY, D. E., ROMINE, M. R., GEESEY, G. G.

“…The iron‐reducing bacterium Shewanella oneidensis MR‐1 has the capacity to contribute to iron cycling over the long term by respiring on crystalline iron…”
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Constraint-Based Model of Shewanella oneidensis MR-1 Metabolism: A Tool for Data Analysis and Hypothesis Generation: e1000822 by Pinchuk, Grigoriy E, Hill, Eric A, Geydebrekht, Oleg V, Ingeniis, Jessica De, Zhang, Xiaolin, Osterman, Andrei, Scott, James H, Reed, Samantha B, Romine, Margaret F, Konopka, Allan E, Beliaev, Alexander S, Fredrickson, Jim K, Reed, Jennifer L

“…Shewanellae are gram-negative facultatively anaerobic metal-reducing bacteria commonly found in chemically (i.e., redox) stratified environments. Occupying…”
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Current Production and Metal Oxide Reduction by Shewanella oneidensis MR-1 Wild Type and Mutants by Bretschger, Orianna, Obraztsova, Anna, Sturm, Carter A., Chang, In Seop, Gorby, Yuri A., Reed, Samantha B., Culley, David E., Reardon, Catherine L., Barua, Soumitra, Romine, Margaret F., Zhou, Jizhong, Beliaev, Alexander S., Bouhenni, Rachida, Saffarini, Daad, Mansfeld, Florian, Kim, Byung-Hong, Fredrickson, James K., Nealson, Kenneth H.

“…Shewanella oneidensis MR-1 is a gram-negative facultative anaerobe capable of utilizing a broad range of electron acceptors, including several solid…”
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