Search Results - "Reeb, Valerie"

Staphylococcus aureus detection from CF respiratory samples is improved using alternative media by Zirbes, Christian F., Pitcher, Nicholas J., Davis, Joseph C., Bartels, Alyssa R., Krogh, Justin D., Teresi, Mary, Farber, Tyler, Milavetz, Francesca, Pamatmat, Anthony J., Rozen, Alexis L., Reinhardt, Lindsey D., Boyken, Linda, Singh, Sachinkumar B., Twait, Erik, Reeb, Valérie C., Ford, Bradley A., Fischer, Anthony J.

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Parallel evolution of linezolid-resistant Staphylococcus aureus in patients with cystic fibrosis by Pitcher, Nicholas J, Feder, Andries, Bolden, Nicholas, Zirbes, Christian F, Pamatmat, Anthony J, Boyken, Linda, Hill, Jared J, Bartels, Alyssa R, Thurman, Andrew L, Reeb, Valerie C, Porterfield, Harry S, Moustafa, Ahmed M, Planet, Paul J, Fischer, Anthony J

“…Linezolid is an antibiotic used to treat serious infections. Resistance to linezolid is considered rare but could emerge with repeated dosing. We recently…”
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A five-gene phylogeny of Pezizomycotina by Spatafora, J. W., Sung, G.-H., Johnson, D., Hesse, C., O'Rourke, B., Serdani, M., Spotts, R., Lutzoni, F., Hofstetter, V., Miadlikowska, J., Reeb, V., Gueidan, C., Fraker, E., Lumbsch, T., Lucking, R., Schmitt, I., Hosaka, K., Aptroot, A., Roux, C., Miller, A. N., Geiser, D. M., Hafellner, J., Hestmark, G., Arnold, A. E., Budel, B., Rauhut, A., Hewitt, D., Untereiner, W. A., Cole, M. S., Scheidegger, C., Schultz, M., Sipman, H., Schoch, C. L.

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Integrating Ambiguously Aligned Regions of DNA Sequences in Phylogenetic Analyses Without Violating Positional Homology by Lutzoni, François, Wagner, Peter, Reeb, Valérie, Zoller, Stefan, Olmstead, R.

“…Phylogenetic analyses of non-protein-coding nucleotide sequences such as ribosomal RNA genes, internal transcribed spacers, and introns are often impeded by…”
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New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes by Miadlikowska, J., Kauff, F., Hofstetter, V., Fraker, E., Grube, M., Hafellner, J., Reeb, V., Hodkinson, B. P., Kukwa, M., Lucking, R., Hestmark, G., Otalora, M. G., Rauhut, A., Budel, B., Scheidegger, C., Timdal, E., Stenroos, S., Brodo, I., Perlmutter, G. B., Ertz, D., Diederich, P., Lendemer, J. C., May, P., Schoch, C. L., Arnold, A. E., Gueidan, C., Tripp, E., Yahr, R., Robertson, C., Lutzoni, F.

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Contemporaneous radiations of fungi and plants linked to symbiosis by Lutzoni, François, Nowak, Michael D., Alfaro, Michael E., Reeb, Valérie, Miadlikowska, Jolanta, Krug, Michael, Arnold, A. Elizabeth, Lewis, Louise A., Swofford, David L., Hibbett, David, Hilu, Khidir, James, Timothy Y., Quandt, Dietmar, Magallón, Susana

“…Interactions between fungi and plants, including parasitism, mutualism, and saprotrophy, have been invoked as key to their respective macroevolutionary…”
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Adaptation through horizontal gene transfer in the cryptoendolithic red alga Galdieria phlegrea by Qiu, Huan, Price, Dana C., Weber, Andreas P.M., Reeb, Valérie, Chan Yang, Eun, Lee, Jun Mo, Kim, Su Yeon, Yoon, Hwan Su, Bhattacharya, Debashish

“…Thriving in the hot, acidic, and metal-rich environments associated with geothermal areas is possible for only a few eukaryotes, with the Cyanidiophytina red…”
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Major fungal lineages are derived from lichen symbiotic ancestors by Pagel, Mark, Lutzoni, François, Reeb, Valérie

“…About one-fifth of all known extant fungal species form obligate symbiotic associations with green algae, cyanobacteria or with both photobionts. These…”
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MRSA strains with distinct accessory genes predominate at different ages in cystic fibrosis by Porterfield, Harry S., Maakestad, Lucas J., LaMarche, Mason M., Thurman, Andrew L., Kienenberger, Zoe E., Pitcher, Nicholas J., Hansen, Alexis R., Zirbes, Christian F., Boyken, Linda, Muyskens, Bethany L., Pezzulo, Alejandro A., Singh, Sachinkumar B., Twait, Erik, Ford, Bradley, Diekema, Daniel J., Reeb, Valérie, Fischer, Anthony J.

“…Rationale Methicillin resistant Staphylococcus aureus (MRSA) is prevalent and consequential in cystic fibrosis (CF). Whole genome sequencing (WGS) could reveal…”
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five-gene phylogeny of Pezizomycotina by Spatafora, J.W, Sung, G.H, Johnson, D, Hesse, C, O'Rourke, B, Serdani, M, Spotts, R, Lutzoni, F, Hofstetter, V, Miadlikowska, J

“…Pezizomycotina is the largest subphylum of Ascomycota and includes the vast majority of filamentous, ascoma-producing species. Here we report the results from…”
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New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA- and two protein-coding genes by Miadlikowska, J, Kauff, F, Hofstetter, V, Fraker, E, Grube, M, Hafellner, J, Reeb, V, Hodkinson, B.P, Kukwa, M, Lucking, R

“…The Lecanoromycetes includes most of the lichen-forming fungal species (>13 500) and is therefore one of the most diverse class of all Fungi in terms of…”
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Good to the bone: microbial community thrives within bone cavities of a bison carcass at Yellowstone National Park by Reeb, Valérie, Kolel, Avraham, McDermott, Timothy R., Bhattacharya, Debashish

“…Summary The discovery of unanticipated microbial diversity in remote, often hostile environments has led to a greater appreciation of the complexity and…”
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Interrelationships of chromalveolates within a broadly sampled tree of photosynthetic protists by Reeb, Valérie C., Peglar, Michael T., Yoon, Hwan Su, Bai, Jennifer Ruoyu, Wu, Min, Shiu, Philip, Grafenberg, Jessie L., Reyes-Prieto, Adrian, Rümmele, Susanne E., Gross, Jeferson, Bhattacharya, Debashish

“…The Chromalveolata “supergroup” is a massive assemblage of single-celled and multicellular protists such as ciliates and kelps that remains to be substantiated…”
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Phylogenetic analyses suggest reverse splicing spread of group I introns in fungal ribosomal DNA by Bhattacharya, Debashish, Reeb, Valérie, Simon, Dawn M, Lutzoni, François

“…Group I introns have spread into over 90 different sites in nuclear ribosomal DNA (rDNA) with greater than 1700 introns reported in these genes. These…”
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The evolution of homing endonuclease genes and group I introns in nuclear rDNA by Haugen, Peik, Reeb, Valérie, Lutzoni, François, Bhattacharya, Debashish

“…Group I introns are autonomous genetic elements that can catalyze their own excision from pre-RNA. Understanding how group I introns move in nuclear ribosomal…”
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Phylogenetic affiliations of members of the heterogeneous lichen-forming fungi of the genus Lecidea sensu Zahlbruckner (Lecanoromycetes, Ascomycota) by Schmull, Michaela, Miadlikowska, Jolanta, Pelzer, Monika, Stocker-Wörgötter, Elfie, Hofstetter, Valerie, Fraker, Emily, Hodkinson, Brendan P., Reeb, Valerie, Kukwa, Martin, Lumbsch, H. Thorsten, Kauff, Frank, Lutzoni, François

“…The genus Lecidea Ach. sensu lato (sensu Zahlbruckner) includes almost 1200 species, out of which only 100 species represent Lecidea sensu stricto (sensu…”
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Evolution of Pleopsidium (Lichenized Ascomycota) S943 Group I Introns and the Phylogeography of an Intron-Encoded Putative Homing Endonuclease by Reeb, Valérie, Haugen, Peik, Bhattacharya, Debashish, Lutzoni, François

“…The sporadic distribution of nuclear group I introns among different fungal lineages can be explained by vertical inheritance of the introns followed by…”
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Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory by Reeb, Valérie, Lutzoni, François, Roux, Claude

“…Despite the recent progress in molecular phylogenetics, many of the deepest relationships among the main lineages of the largest fungal phylum, Ascomycota,…”
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Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits by Lutzoni, F, Kauff, F, Cox, D.J, McLaughlin, D, Celio, G, Dentinger, B, Padamsee, M, Hibbett, D, James, T.Y, Baloch, E

“…Based on an overview of progress in molecular systematics of the true fungi (Fungi/Eumycota) since 1990, little overlap was found among single-locus data…”
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The lichen family Acarosporaceae: Circumscription, origin of divergence and evolution of group I intron encoded homing endonuclease by Reeb, Valerie Christine

“…The lichen-forming fungi family Acarosporaceae has several putative ancestral character states suggesting a basal position within the lichenized ascomycetes…”
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