Search Results - "Reddy, S N"

Evidence for the role of transcription factors in the co-transcriptional regulation of intron retention by Ullah, Fahad, Jabeen, Saira, Salton, Maayan, Reddy, Anireddy S N, Ben-Hur, Asa

“…Alternative splicing is a widespread regulatory phenomenon that enables a single gene to produce multiple transcripts. Among the different types of alternative…”
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RODAN: a fully convolutional architecture for basecalling nanopore RNA sequencing data by Neumann, Don, Reddy, Anireddy S N, Ben-Hur, Asa

“…Despite recent progress in basecalling of Oxford nanopore DNA sequencing data, its wide adoption is still being hampered by its relatively low accuracy…”
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The origins of flow softening during high-temperature deformation of a Ti–6Al–4V alloy with a lamellar microstructure by Park, Chan Hee, Kim, Jeoung Han, Hyun, Yong-Taek, Yeom, Jong-Taek, Reddy, N.S.

“…•Flow softening of Ti–6Al–4V with a lamellar microstructure was modeled.•Flow softening originated from colony rotation and alpha particle coarsening.•The…”
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Alternative Splicing Variation: Accessing and Exploiting in Crop Improvement Programs by Dwivedi, Sangam L., Quiroz, Luis Felipe, Reddy, Anireddy S. N., Spillane, Charles, Ortiz, Rodomiro

“…Alternative splicing (AS) is a gene regulatory mechanism modulating gene expression in multiple ways. AS is prevalent in all eukaryotes including plants. AS…”
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A survey of the sorghum transcriptome using single-molecule long reads by Abdel-Ghany, Salah E., Hamilton, Michael, Jacobi, Jennifer L., Ngam, Peter, Devitt, Nicholas, Schilkey, Faye, Ben-Hur, Asa, Reddy, Anireddy S. N.

“…Alternative splicing and alternative polyadenylation (APA) of pre-mRNAs greatly contribute to transcriptome diversity, coding capacity of a genome and gene…”
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Multiplex CRISPR Mutagenesis of the Serine/Arginine-Rich (SR) Gene Family in Rice by Butt, Haroon, Piatek, Agnieszka, Li, Lixin, S N Reddy, Anireddy, M Mahfouz, Magdy

“…Plant growth responds to various environmental and developmental cues via signaling cascades that influence gene expression at the level of transcription and…”
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Transcriptome Analysis of Drought-Resistant and Drought-Sensitive Sorghum ( Sorghum bicolor ) Genotypes in Response to PEG-Induced Drought Stress by Abdel-Ghany, Salah E, Ullah, Fahad, Ben-Hur, Asa, Reddy, Anireddy S N

“…Drought is a major limiting factor of crop yields. In response to drought, plants reprogram their gene expression, which ultimately regulates a multitude of…”
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The Landscape of RNA-Protein Interactions in Plants: Approaches and Current Status by Burjoski, Vesper, Reddy, Anireddy S N

“…RNAs transmit information from DNA to encode proteins that perform all cellular processes and regulate gene expression in multiple ways. From the time of…”
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Development of an in vitro pre-mRNA splicing assay using plant nuclear extract by Albaqami, Mohammed, Reddy, Anireddy S N

“…Pre-mRNA splicing is an essential post-transcriptional process in all eukaryotes. In vitro splicing systems using nuclear or cytoplasmic extracts from…”
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Alternative Splicing and Protein Diversity: Plants Versus Animals by Chaudhary, Saurabh, Khokhar, Waqas, Jabre, Ibtissam, Reddy, Anireddy S N, Byrne, Lee J, Wilson, Cornelia M, Syed, Naeem H

“…Plants, unlike animals, exhibit a very high degree of plasticity in their growth and development and employ diverse strategies to cope with the variations…”
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Neural Network Approach to Construct a Processing Map from a Non-linear Stress–Temperature Relationship by Park, Chan Hee, Cha, Dojin, Kim, Minsoo, Reddy, N. S., Yeom, Jong-Taek

“…An accurate processing map for a metal provides a means of attaining a desired microstructure and required shape through thermo-mechanical processing. To…”
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Description of Hymenobacter arizonensis sp. nov. from the southwestern arid lands of the United States of America by Reddy, Gundlapally S. N., Garcia-Pichel, Ferran

“…Strain OR362-8 T was isolated from a biological soil crust sample collected from the southwestern arid lands of the United States of America, using BG11-PGY…”
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The Rice Serine/Arginine Splicing Factor RS33 Regulates Pre-mRNA Splicing during Abiotic Stress Responses by Butt, Haroon, Bazin, Jeremie, Prasad, Kasavajhala V S K, Awad, Nourelislam, Crespi, Martin, Reddy, Anireddy S N, Mahfouz, Magdy M

“…Abiotic stresses profoundly affect plant growth and development and limit crop productivity. Pre-mRNA splicing is a major form of gene regulation that helps…”
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Quantitative estimation of corrosion rate in 3C steels under seawater environment by Lee, Sedong, Narayana, P.L., Seok, Bang Won, Panigrahi, B.B., Lim, Su-Gun, S. Reddy, N.

“…An artificial neural network method is proposed to correlate the relationship between the corrosion rate of 3C steels with seawater environment factors. The…”
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Stress-Induced Changes in Alternative Splicing Landscape in Rice: Functional Significance of Splice Isoforms in Stress Tolerance by Ganie, Showkat Ahmad, Reddy, Anireddy S N

“…Improvements in yield and quality of rice are crucial for global food security. However, global rice production is substantially hindered by various biotic and…”
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DNA-Binding Activity of CAMTA3 Is Essential for Its Function: Identification of Critical Amino Acids for Its Transcriptional Activity by Prasad, Kasavajhala V S K, Abdel-Hameed, Amira A E, Jiang, Qiyan, Reddy, Anireddy S N

“…Calmodulin-binding transcription activators (CAMTAs), a small family of highly conserved transcription factors, function in calcium-mediated signaling…”
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Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing by Richardson, Dale N, Rogers, Mark F, Labadorf, Adam, Ben-Hur, Asa, Guo, Hui, Paterson, Andrew H, Reddy, Anireddy S N

“…Alternative splicing (AS) of pre-mRNA is a fundamental molecular process that generates diversity in the transcriptome and proteome of eukaryotic organisms. SR…”
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Quantitative profiling of N6-methyladenosine at single-base resolution in stem-differentiating xylem of Populus trichocarpa using Nanopore direct RNA sequencing by Gao, Yubang, Liu, Xuqing, Wu, Bizhi, Wang, Huihui, Xi, Feihu, Kohnen, Markus V., Reddy, Anireddy S. N., Gu, Lianfeng

“…Abstract There are no comprehensive methods to identify N 6 -methyladenosine (m 6 A) at single-base resolution for every single transcript, which is necessary…”
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Analysis of Transcriptome and Epitranscriptome in Plants Using PacBio Iso-Seq and Nanopore-Based Direct RNA Sequencing by Zhao, Liangzhen, Zhang, Hangxiao, Kohnen, Markus V, Prasad, Kasavajhala V S K, Gu, Lianfeng, Reddy, Anireddy S N

“…Nanopore sequencing from Oxford Nanopore Technologies (ONT) and Pacific BioSciences (PacBio) single-molecule real-time (SMRT) long-read isoform sequencing…”
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Bacillus aerius sp. nov., Bacillus aerophilus sp. nov., Bacillus stratosphericus sp. nov. and Bacillus altitudinis sp. nov., isolated from cryogenic tubes used for collecting air samples from high altitudes by Shivaji, S, Chaturvedi, P, Suresh, K, Reddy, G. S. N, Dutt, C. B. S, Wainwright, M, Narlikar, J. V, Bhargava, P. M

“…1 Centre for Cellular and Molecular Biology, Uppal Road, Hyderabad 500 007, India 2 Indian Space Research Organization, Antariksha Bhavan, New BEL Road,…”
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