Search Results - "Ramsay, Luke"

A chromosome conformation capture ordered sequence of the barley genome by Mascher, Martin, Gundlach, Heidrun, Himmelbach, Axel, Beier, Sebastian, Twardziok, Sven O., Wicker, Thomas, Radchuk, Volodymyr, Dockter, Christoph, Hedley, Pete E., Russell, Joanne, Bayer, Micha, Ramsay, Luke, Liu, Hui, Haberer, Georg, Zhang, Xiao-Qi, Zhang, Qisen, Barrero, Roberto A., Li, Lin, Taudien, Stefan, Groth, Marco, Felder, Marius, Hastie, Alex, Šimková, Hana, Staňková, Helena, Vrána, Jan, Chan, Saki, Muñoz-Amatriaín, María, Ounit, Rachid, Wanamaker, Steve, Bolser, Daniel, Colmsee, Christian, Schmutzer, Thomas, Aliyeva-Schnorr, Lala, Grasso, Stefano, Tanskanen, Jaakko, Chailyan, Anna, Sampath, Dharanya, Heavens, Darren, Clissold, Leah, Cao, Sujie, Chapman, Brett, Dai, Fei, Han, Yong, Li, Hua, Li, Xuan, Lin, Chongyun, McCooke, John K., Tan, Cong, Wang, Penghao, Wang, Songbo, Yin, Shuya, Zhou, Gaofeng, Poland, Jesse A., Bellgard, Matthew I., Borisjuk, Ljudmilla, Houben, Andreas, Doležel, Jaroslav, Ayling, Sarah, Lonardi, Stefano, Kersey, Paul, Langridge, Peter, Muehlbauer, Gary J., Clark, Matthew D., Caccamo, Mario, Schulman, Alan H., Mayer, Klaus F. X., Platzer, Matthias, Close, Timothy J., Scholz, Uwe, Hansson, Mats, Zhang, Guoping, Braumann, Ilka, Spannagl, Manuel, Li, Chengdao, Waugh, Robbie, Stein, Nils

“…Cereal grasses of the Triticeae tribe have been the major food source in temperate regions since the dawn of agriculture. Their large genomes are characterized…”
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Development and Evaluation of a Barley 50k iSelect SNP Array by Bayer, Micha M, Rapazote-Flores, Paulo, Ganal, Martin, Hedley, Pete E, Macaulay, Malcolm, Plieske, Jörg, Ramsay, Luke, Russell, Joanne, Shaw, Paul D, Thomas, William, Waugh, Robbie

“…High-throughput genotyping arrays continue to be an attractive, cost-effective alternative to sequencing based approaches. We have developed a new 50k Illumina…”
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The effect of temperature on the male and female recombination landscape of barley by Phillips, Dylan, Jenkins, Glyn, Macaulay, Malcolm, Nibau, Candida, Wnetrzak, Joanna, Fallding, Derek, Colas, Isabelle, Oakey, Helena, Waugh, Robbie, Ramsay, Luke

“…Barley (Hordeum vulgare) is a crop of global significance. However, a third of the genes of barley are largely inaccessible to conventional breeding programmes…”
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Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley by Comadran, Jordi, Kilian, Benjamin, Russell, Joanne, Ramsay, Luke, Stein, Nils, Ganal, Martin, Shaw, Paul, Bayer, Micha, Thomas, William, Marshall, David, Hedley, Pete, Tondelli, Alessandro, Pecchioni, Nicola, Francia, Enrico, Korzun, Viktor, Walther, Alexander, Waugh, Robbie

“…Robbie Waugh and colleagues report that the EARLINESS PER SE ( EPS2 ) locus is associated with spring growth habit and environmental adaptation in barley…”
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A Comparison of Mainstream Genotyping Platforms for the Evaluation and Use of Barley Genetic Resources by Darrier, Benoit, Russell, Joanne, Milner, Sara G, Hedley, Pete E, Shaw, Paul D, Macaulay, Malcolm, Ramsay, Luke D, Halpin, Claire, Mascher, Martin, Fleury, Delphine L, Langridge, Peter, Stein, Nils, Waugh, Robbie

“…We compared the performance of two commonly used genotyping platforms, genotyping-by-sequencing (GBS) and single nucleotide polymorphism-arrays (SNP), to…”
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An evaluation of genotyping by sequencing (GBS) to map the Breviaristatum-e (ari-e) locus in cultivated barley by Liu, Hui, Bayer, Micha, Druka, Arnis, Russell, Joanne R, Hackett, Christine A, Poland, Jesse, Ramsay, Luke, Hedley, Pete E, Waugh, Robbie

“…We explored the use of genotyping by sequencing (GBS) on a recombinant inbred line population (GPMx) derived from a cross between the two-rowed barley cultivar…”
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Understanding the genetic control and physiological traits associated with rhizosheath production by barley (Hordeum vulgare) by George, Timothy S, Brown, Lawrie K, Ramsay, Luke, White, Philip J, Newton, Adrian C, Bengough, A. Glyn, Russell, Joanne, Thomas, William T. B

“…There is an urgent need for simple rapid screens of root traits that improve the acquisition of nutrients and water. Temperate cereals produce rhizosheaths of…”
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A highly mutagenised barley ( cv. Golden Promise) TILLING population coupled with strategies for screening-by-sequencing by Schreiber, Miriam, Barakate, Abdellah, Uzrek, Nicola, Macaulay, Malcolm, Sourdille, Adeline, Morris, Jenny, Hedley, Pete E, Ramsay, Luke, Waugh, Robbie

“…We developed and characterised a highly mutagenised TILLING population of the barley ( ) cultivar Golden Promise. Golden Promise is the 'reference' genotype…”
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Development and implementation of high-throughput SNP genotyping in barley by Close, Timothy J, Bhat, Prasanna R, Lonardi, Stefano, Wu, Yonghui, Rostoks, Nils, Ramsay, Luke, Druka, Arnis, Stein, Nils, Svensson, Jan T, Wanamaker, Steve, Bozdag, Serdar, Roose, Mikeal L, Moscou, Matthew J, Chao, Shiaoman, Varshney, Rajeev K, Szucs, Péter, Sato, Kazuhiro, Hayes, Patrick M, Matthews, David E, Kleinhofs, Andris, Muehlbauer, Gary J, DeYoung, Joseph, Marshall, David F, Madishetty, Kavitha, Fenton, Raymond D, Condamine, Pascal, Graner, Andreas, Waugh, Robbie

“…High density genetic maps of plants have, nearly without exception, made use of marker datasets containing missing or questionable genotype calls derived from…”
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Association mapping of malting quality traits in UK spring and winter barley cultivar collections by Looseley, Mark E., Ramsay, Luke, Bull, Hazel, Swanston, J. Stuart, Shaw, Paul D., Macaulay, Malcolm, Booth, Allan, Russell, Joanne R., Waugh, Robbie, Thomas, William T. B.

“…Key message Historical malting quality data was collated from UK national and recommended list trial data and used in a GWAS. 25 QTL were identified, with the…”
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Measuring the frequency and distribution of meiotic crossovers in homozygous barley inbred lines by Schreiber, Miriam, Chen, Yun-Yu, Ramsay, Luke, Waugh, Robbie

“…We report a novel approach for establishing the number and position of CO events in individual homozygous inbred plants by combining low level EMS mutagenesis,…”
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Genome-wide association mapping to candidate polymorphism resolution in the unsequenced barley genome by Cockram, James, White, Jon, Zuluaga, Diana L., Smith, David, Comadran, Jordi, Macaulay, Malcolm, Luo, Zewei, Kearsey, Mike J., Werner, Peter, Harrap, David, Tapsell, Chris, Liu, Hui, Hedley, Peter E., Stein, Nils, Schulte, Daniela, Steuernagel, Burkhard, Marshall, David F., Thomas, William T. B., Ramsay, Luke, Mackay, Ian, Balding, David J., Waugh, Robbie, O'Sullivan, Donal M., Doebley, John

“…Although commonplace in human disease genetics, genome-wide association (GWA) studies have only relatively recently been applied to plants. Using 32 phenotypes…”
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An Induced Mutation in HvRECQL4 Increases the Overall Recombination and Restores Fertility in a Barley HvMLH3 Mutant Background by Arrieta, Mikel, Macaulay, Malcolm, Colas, Isabelle, Schreiber, Miriam, Shaw, Paul D, Waugh, Robbie, Ramsay, Luke

“…Plant breeding relies on the meiotic recombination or crossing over to generate the new combinations of the alleles along and among the chromosomes. However,…”
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The emergence of whole genome association scans in barley by Waugh, Robbie, Jannink, Jean-Luc, Muehlbauer, Gary J, Ramsay, Luke

“…Barley geneticists are currently using association genetics to identify and fine map traits directly in elite plant breeding material. This has been made…”
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Conserved signalling components coordinate epidermal patterning and cuticle deposition in barley by Liu, Linsan, Jose, Sarah B., Campoli, Chiara, Bayer, Micha M., Sánchez-Diaz, Miguel A., McAllister, Trisha, Zhou, Yichun, Eskan, Mhmoud, Milne, Linda, Schreiber, Miriam, Batstone, Thomas, Bull, Ian D., Ramsay, Luke, von Wettstein-Knowles, Penny, Waugh, Robbie, Hetherington, Alistair M., McKim, Sarah M.

“…Faced with terrestrial threats, land plants seal their aerial surfaces with a lipid-rich cuticle. To breathe, plants interrupt their cuticles with adjustable…”
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A spontaneous mutation in MutL-Homolog 3 (HvMLH3) affects synapsis and crossover resolution in the barley desynaptic mutant des10 by Colas, Isabelle, Macaulay, Malcolm, Higgins, James D., Phillips, Dylan, Barakate, Abdellah, Posch, Markus, Armstrong, Susan J., Franklin, F. Chris H., Halpin, Claire, Waugh, Robbie, Ramsay, Luke

“…Although meiosis is evolutionarily conserved, many of the underlying mechanisms show species-specific differences. These are poorly understood in large genome…”
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Barley Anther and Meiocyte Transcriptome Dynamics in Meiotic Prophase I by Barakate, Abdellah, Orr, Jamie, Schreiber, Miriam, Colas, Isabelle, Lewandowska, Dominika, McCallum, Nicola, Macaulay, Malcolm, Morris, Jenny, Arrieta, Mikel, Hedley, Pete E, Ramsay, Luke, Waugh, Robbie

“…In flowering plants, successful germinal cell development and meiotic recombination depend upon a combination of environmental and genetic factors. To gain…”
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Unlocking the genetic diversity and population structure of the newly introduced two-row spring European HerItage Barley collecTion (ExHIBiT) by Bernád, Villő, Al-Tamimi, Nadia, Langan, Patrick, Gillespie, Gary, Dempsey, Timothy, Henchy, Joey, Harty, Mary, Ramsay, Luke, Houston, Kelly, Macaulay, Malcolm, Shaw, Paul D, Raubach, Sebastian, Mcdonnel, Kevin P, Russell, Joanne, Waugh, Robbie, Khodaeiaminjan, Mortaza, Negrão, Sónia

“…In the last century, breeding programs have traditionally favoured yield-related traits, grown under high-input conditions, resulting in a loss of genetic…”
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Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties by Rostoks, N, Ramsay, L, MacKenzie, K, Cardle, L, Bhat, P.R, Roose, M.L, Svensson, J.T, Stein, N, Varshney, R.K, Marshall, D.F

“…Genomewide association studies depend on the extent of linkage disequilibrium (LD), the number and distribution of markers, and the underlying structure in…”
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Downregulation of Barley Regulator of Telomere Elongation Helicase 1 Alters the Distribution of Meiotic Crossovers by Barakate, Abdellah, Arrieta, Mikel, Macaulay, Malcolm, Vivera, Sebastian, Davidson, Diane, Stephens, Jennifer, Orr, Jamie, Schreiber, Miriam, Ramsay, Luke, Halpin, Claire, Waugh, Robbie

“…Programmed meiotic DNA double-strand breaks (DSBs), necessary for proper chromosomal segregation and viable gamete formation, are repaired by homologous…”
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