Search Results - "Ramos, R. C"

Genome-scale modeling of Chinese hamster ovary cells by hybrid semi-parametric flux balance analysis by Ramos, João R. C., Oliveira, Gil P., Dumas, Patrick, Oliveira, Rui

“…Flux balance analysis (FBA) is currently the standard method to compute metabolic fluxes in genome-scale networks. Several FBA extensions employing diverse…”
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Entangled Macroscopic Quantum States in Two Superconducting Qubits by Berkley, A. J., Xu, H., Ramos, R. C., Gubrud, M. A., Strauch, F. W., Johnson, P. R., Anderson, J. R., Dragt, A. J., Lobb, C. J., Wellstood, F. C.

“…We present spectroscopic evidence for the creation of entangled macroscopic quantum states in two current-biased Josephson-junction qubits coupled by a…”
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A General Hybrid Modeling Framework for Systems Biology Applications: Combining Mechanistic Knowledge with Deep Neural Networks under the SBML Standard by Pinto, José, Ramos, João R. C., Costa, Rafael S., Oliveira, Rui

“…In this paper, a computational framework is proposed that merges mechanistic modeling with deep neural networks obeying the Systems Biology Markup Language…”
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Hybrid deep modeling of a CHO-K1 fed-batch process: combining first-principles with deep neural networks by Pinto, José, Ramos, João R. C., Costa, Rafael S., Rossell, Sergio, Dumas, Patrick, Oliveira, Rui

“…Introduction: Hybrid modeling combining First-Principles with machine learning is becoming a pivotal methodology for Biopharma 4.0 enactment. Chinese Hamster…”
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Hybrid Deep Modeling of a GS115 (Mut+) Pichia pastoris Culture with State–Space Reduction by Pinto, José, Ramos, João R. C., Costa, Rafael S., Oliveira, Rui

“…Hybrid modeling workflows combining machine learning with mechanistic process descriptions are becoming essential tools for bioprocess digitalization. In this…”
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From blue light to clock genes in zebrafish ZEM-2S cells by Ramos, Bruno C R, Moraes, Maria Nathália C M, Poletini, Maristela O, Lima, Leonardo H R G, Castrucci, Ana Maria L

“…Melanopsin has been implicated in the mammalian photoentrainment by blue light. This photopigment, which maximally absorbs light at wavelengths between 470 and…”
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Methane release from the southern Brazilian margin during the last glacial by Portilho-Ramos, R. C., Cruz, A. P. S., Barbosa, C. F., Rathburn, A. E., Mulitza, S., Venancio, I. M., Schwenk, T., Rühlemann, C., Vidal, L., Chiessi, C. M., Silveira, C. S.

“…Seafloor methane release can significantly affect the global carbon cycle and climate. Appreciable quantities of methane are stored in continental margin…”
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Coupling of equatorial Atlantic surface stratification to glacial shifts in the tropical rainbelt by Portilho-Ramos, R. C., Chiessi, C. M., Zhang, Y., Mulitza, S., Kucera, M., Siccha, M., Prange, M., Paul, A.

“…The modern state of the Atlantic meridional overturning circulation promotes a northerly maximum of tropical rainfall associated with the Intertropical…”
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Hydroxychloroquine (HCQ) in lupus pregnancy: double-blind and placebo-controlled study by Levy, R A, Vilela, V S, Cataldo, M J, Ramos, R C, Duarte, J LMB, Tura, B R, Albuquerque, E MN, Jesús, N R

“…We conducted a randomized, controlled study to assess the need for hydroxychloroquine (HCQ) during lupus pregnancy and to assess safety. Twenty consecutive…”
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Deep hybrid modeling of a HEK293 process: Combining long short-term memory networks with first principles equations by Ramos, João R C, Pinto, José, Poiares-Oliveira, Gil, Peeters, Ludovic, Dumas, Patrick, Oliveira, Rui

“…The combination of physical equations with deep learning is becoming a promising methodology for bioprocess digitalization. In this paper, we investigate for…”
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Mid‐ to Late Holocene Contraction of the Intertropical Convergence Zone Over Northeastern South America by Chiessi, C. M., Mulitza, S., Taniguchi, N. K., Prange, M., Campos, M. C., Häggi, C., Schefuß, E., Pinho, T. M. L., Frederichs, T., Portilho‐Ramos, R. C., Sousa, S. H. M., Crivellari, S., Cruz, F. W.

“…Modern precipitation over northeastern (NE) South America is strongly controlled by the seasonal meridional migration of the Intertropical Convergence Zone…”
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A dynamic model linking cell growth to intracellular metabolism and extracellular by‐product accumulation by Ramos, João R. C., Rath, Alexander G., Genzel, Yvonne, Sandig, Volker, Reichl, Udo

“…Mathematical modeling of animal cell growth and metabolism is essential for the understanding and improvement of the production of biopharmaceuticals. Models…”
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Spectroscopy of three-particle entanglement in a macroscopic superconducting circuit by HUIZHONG XU, STRAUCH, Frederick W, WELLSTOOD, F. C, DUTTA, S. K, JOHNSON, Philip R, RAMOS, R. C, BERKLEY, A. J, PAIK, H, ANDERSON, J. R, DRAGT, A. J, LOBB, C. J

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Atolchelys lepida, a new side-necked turtle from the Early Cretaceous of Brazil and the age of crown Pleurodira by Romano, Pedro S. R., Gallo, Valéria, Ramos, Renato R. C., Antonioli, Luzia

“…We report a new pleurodiran turtle from the Barremian Morro do Chaves Formation, Sergipe-Alagoas Basin, Brazil. We tested the phylogenetic position of…”
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The incidence and magnitude of fibrinolytic activation in trauma patients: a rebuttal by Ramos, C. R., Moore, E. E., Manco‐Johnson, M. L., Silliman, C. C., Chapman, M. C., Banerjee, A.

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Evaluation of nitrogen dioxide chemiluminescence monitors in a polluted urban environment by Dunlea, E. J., Herndon, S. C., Nelson, D. D., Volkamer, R. M., San Martini, F., Sheehy, P. M., Zahniser, M. S., Shorter, J. H., Wormhoudt, J. C., Lamb, B. K., Allwine, E. J., Gaffney, J. S., Marley, N. A., Grutter, M., Marquez, C., Blanco, S., Cardenas, B., Retama, A., Ramos Villegas, C. R., Kolb, C. E., Molina, L. T., Molina, M. J.

“…Data from a recent field campaign in Mexico City are used to evaluate the performance of the EPA Federal Reference Method for monitoring the ambient…”
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Design for effective thermalization of junctions for quantum coherence by Ramos, R.C., Gubrud, M.A., Berkley, A.J., Anderson, J.R., Lobb, C.J., Wellstood, F.C.

“…We present a design for effectively isolating low-dissipation superconducting tunnel junctions without causing excessive heating. In order to obtain a long…”
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Measurements of Decoherence in Three dc SQUID Phase Qubits by Paik, H., Cooper, B.K., Dutta, S.K., Lewis, R.M., Ramos, R.C., Palomaki, T.A., Przybysz, A.J., Dragt, A.J., Anderson, J.R., Lobb, C.J., Wellstood, F.C.

“…We report measurements of spectroscopic linewidth and Rabi oscillations in three thin-film dc SQUID phase qubits. One device had a 6-turn Nb loop, the second…”
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Determination of relaxation time of a Josephson junction qubit by DUTTA, S. K, XU, H, BERKLEY, A. J, RAMOS, R. C, GUBRUD, M. A, ANDERSON, J. R, LOBB, C. J, WELLSTOOD, F. C

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Cooper-pair box as a variable capacitor by Paik, H., Strauch, F.W., Ramos, R.C., Berkley, A.J., Xu, H., Dutta, S.K., Johnson, P.R., Dragt, A.J., Anderson, J.R., Lobb, C.J., Wellstood, F.C.

“…We calculate the effective capacitance of a Cooper-pair box and demonstrate that the Cooper-pair box can be used as a variable capacitor. The gate voltage…”
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