Search Results - "Ramon, Jan"
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1
Linear Programs with Conjunctive Database Queries
Published in Logical methods in computer science (01-01-2024)“…In this paper, we study the problem of optimizing a linear program whose variables are the answers to a conjunctive query. For this we propose the language…”
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IncGraph: Incremental graphlet counting for topology optimisation
Published in PloS one (26-04-2018)“…Graphlets are small network patterns that can be counted in order to characterise the structure of a network (topology). As part of a topology optimisation…”
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A machine learning based framework to identify and classify long terminal repeat retrotransposons
Published in PLoS computational biology (23-04-2018)“…Transposable elements (TEs) are repetitive nucleotide sequences that make up a large portion of eukaryotic genomes. They can move and duplicate within a…”
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A polynomial-time maximum common subgraph algorithm for outerplanar graphs and its application to chemoinformatics
Published in Annals of mathematics and artificial intelligence (01-12-2013)“…Metrics for structured data have received an increasing interest in the machine learning community. Graphs provide a natural representation for structured…”
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Effective feature construction by maximum common subgraph sampling
Published in Machine learning (01-05-2011)“…The standard approach to feature construction and predictive learning in molecular datasets is to employ computationally expensive graph mining techniques and…”
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Frequent subgraph mining in outerplanar graphs
Published in Data mining and knowledge discovery (01-11-2010)Get full text
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Computerized prediction of intensive care unit discharge after cardiac surgery: development and validation of a Gaussian processes model
Published in BMC medical informatics and decision making (25-10-2011)“…The intensive care unit (ICU) length of stay (LOS) of patients undergoing cardiac surgery may vary considerably, and is often difficult to predict within the…”
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A lower bound on the probability that a binomial random variable is exceeding its mean
Published in Statistics & probability letters (01-12-2016)“…We provide a lower bound on the probability that a binomial random variable is exceeding its mean. Our proof employs estimates on the mean absolute deviation…”
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An accurate, scalable and verifiable protocol for federated differentially private averaging
Published in Machine learning (01-11-2022)“…Learning from data owned by several parties, as in federated learning, raises challenges regarding the privacy guarantees provided to participants and the…”
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Limits of multi-relational graphs
Published in Machine learning (01-01-2023)“…Graphons are limits of large graphs. Motivated by a theoretical problem from statistical relational learning, we develop a generalization of basic results from…”
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Guest editors introduction: special issue on inductive logic programming
Published in Machine learning (01-06-2016)“…Issue Title: Special Issue on Inductive Logic Programming; Guest Editors: Jesse Davis and Jan Ramon…”
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Learning relational dependency networks in hybrid domains
Published in Machine learning (01-09-2015)“…Statistical relational learning (SRL) is concerned with developing formalisms for representing and learning from data that exhibit both uncertainty and…”
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13
Hoeffding’s Inequality for Sums of Dependent Random Variables
Published in Mediterranean journal of mathematics (01-12-2017)“…Let X 1 , … , X n be, possibly dependent, [0, 1]-valued random variables. What is a sharp upper bound on the probability that their sum is significantly larger…”
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Cheaper faster drug development validated by the repositioning of drugs against neglected tropical diseases
Published in Journal of the Royal Society interface (06-03-2015)“…There is an urgent need to make drug discovery cheaper and faster. This will enable the development of treatments for diseases currently neglected for economic…”
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15
Predicting Tryptic Cleavage from Proteomics Data Using Decision Tree Ensembles
Published in Journal of proteome research (03-05-2013)“…Trypsin is the workhorse protease in mass spectrometry-based proteomics experiments and is used to digest proteins into more readily analyzable peptides. To…”
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16
Closed-loop cycles of experiment design, execution, and learning accelerate systems biology model development in yeast
Published in Proceedings of the National Academy of Sciences - PNAS (03-09-2019)“…One of the most challenging tasks in modern science is the development of systems biology models: Existing models are often very complex but generally have low…”
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Machine learning applications in proteomics research: How the past can boost the future
Published in Proteomics (Weinheim) (01-03-2014)“…Machine learning is a subdiscipline within artificial intelligence that focuses on algorithms that allow computers to learn solving a (complex) problem from…”
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18
An efficiently computable subgraph pattern support measure: counting independent observations
Published in Data mining and knowledge discovery (01-11-2013)“…Graph support measures are functions measuring how frequently a given subgraph pattern occurs in a given database graph. An important class of support measures…”
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Automated detection of toxicophores and prediction of mutagenicity using PMCSFG algorithm
Published in Molecular informatics (01-03-2023)“…Maximum common substructures (MCS) have received a lot of attention in the chemoinformatics community. They are typically used as a similarity measure between…”
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Graph sampling with applications to estimating the number of pattern embeddings and the parameters of a statistical relational model
Published in Data mining and knowledge discovery (01-07-2018)“…Counting the number of times a pattern occurs in a database is a fundamental data mining problem. It is a subroutine in a diverse set of tasks ranging from…”
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