Search Results - "Raja, Mugasimangalam C."

De Novo transcriptome assembly (NGS) of Curcuma longa L. rhizome reveals novel transcripts related to anticancer and antimalarial terpenoids by Annadurai, Ramasamy S, Neethiraj, Ramprasad, Jayakumar, Vasanthan, Damodaran, Anand C, Rao, Sudha Narayana, Katta, Mohan A V S K, Gopinathan, Sreeja, Sarma, Santosh Prasad, Senthilkumar, Vanitha, Niranjan, Vidya, Gopinath, Ashok, Mugasimangalam, Raja C

“…Herbal remedies are increasingly being recognised in recent years as alternative medicine for a number of diseases including cancer. Curcuma longa L., commonly…”
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Next generation sequencing and de novo transcriptome analysis of Costus pictus D. Don, a non-model plant with potent anti-diabetic properties by Annadurai, Ramasamy S, Jayakumar, Vasanthan, Mugasimangalam, Raja C, Katta, Mohan A V S K, Anand, Sanchita, Gopinathan, Sreeja, Sarma, Santosh Prasad, Fernandes, Sunjay Jude, Mullapudi, Nandita, Murugesan, S, Rao, Sudha Narayana

“…Phyto-remedies for diabetic control are popular among patients with Type II Diabetes mellitus (DM), in addition to other diabetic control measures. A number of…”
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Genome sequence of the pattern forming Paenibacillus vortex bacterium reveals potential for thriving in complex environments by Sirota-Madi, A, Olender, T, Helman, Y, Ingham, C, Brainis, I, Roth, D, Hagi, E, Brodsky, L, Leshkowitz, D, Galatenko, V, Nikolaev, V, Mugasimangalam, R.C, Bransburg-Zabary, S, Gutnick, D.L, Lancet, D, Ben-Jacob, E

“…The pattern-forming bacterium Paenibacillus vortex is notable for its advanced social behavior, which is reflected in development of colonies with highly…”
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A Stable Hybrid Containing Haploid Genomes of Two Obligate Diploid Candida Species by Chakraborty, Uttara, Mohamed, Aiyaz, Kakade, Pallavi, Mugasimangalam, Raja C, Sadhale, Parag P, Sanyal, Kaustuv

“…Erratum ( vol. 12 , p. 1413 ) Classifications Services EC Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg…”
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A cross strain Plasmodium falciparum microarray optimized for the transcriptome analysis of Plasmodium falciparum patient derived isolates by Subudhi, Amit Kumar, Boopathi, P.A., Middha, Sheetal, Acharya, Jyoti, Rao, Sudha Narayana, Mugasimangalam, Raja C., Sirohi, Paramendra, Kochar, Sanjay K., Kochar, Dhanpat K., Das, Ashis

“…Malarial parasite P. falciparum, an apicomplexan protozoan has a 23.3MB nuclear genome and encodes ~5600 transcripts. The genetic diversity of the parasite…”
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Dataset of natural antisense transcripts in P. vivax clinical isolates derived using custom designed strand-specific microarray by Boopathi, P.A., Subudhi, Amit Kumar, Garg, Shilpi, Middha, Sheetal, Acharya, Jyoti, Pakalapati, Deepak, Saxena, Vishal, Aiyaz, Mohammed, Chand, Bipin, Mugasimangalam, Raja C., Kochar, Sanjay K., Sirohi, Parmendra, Kochar, Dhanpat K., Das, Ashis

“…Natural antisense transcripts (NATs) have been detected in many organisms and shown to regulate gene expression. Similarly, NATs have also been observed in…”
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An in vivo transcriptome data set of natural antisense transcripts from Plasmodium falciparum clinical isolates by Subudhi, Amit Kumar, Boopathi, P.A., Garg, Shilpi, Middha, Sheetal, Acharya, Jyoti, Pakalapati, Deepak, Saxena, Vishal, Aiyaz, Mohammed, Orekondy, Harsha B., Mugasimangalam, Raja C., Sirohi, Paramendra, Kochar, Sanjay K., Kochar, Dhanpat K., Das, Ashis

“…Antisense transcription is pervasive among biological systems and one of the products of antisense transcription is natural antisense transcripts (NATs)…”
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Prophage-Driven Genomic Structural Changes Promote Bartonella Vertical Evolution by Gutiérrez, Ricardo, Markus, Barak, Carstens Marques de Sousa, Keyla, Marcos-Hadad, Evgeniya, Mugasimangalam, Raja C, Nachum-Biala, Yaarit, Hawlena, Hadas, Covo, Shay, Harrus, Shimon

“…Bartonella is a genetically diverse group of vector-borne bacteria. Over 40 species have been characterized to date, mainly from mammalian reservoirs and…”
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Complete mitochondrial genome of the Himalayan honey bee, Apis laboriosa by Chhakchhuak, Liansangmawii, De Mandal, Surajit, Gurusubramanian, Guruswami, Sudalaimuthu, Naganeeswaran, Gopalakrishnan, Chellappa, Mugasimangalam, Raja C, Senthil Kumar, Nachimuthu

“…The complete mitochondrial genome of Himalayan bee Apis laboriosa, from Mizoram, India, has been sequenced using Illumina NextSeq500 platform and analysed. The…”
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The complete mitochondrial genome of the Indian honey bee, Apis cerena cerana (Hymenoptera: Apidae: Apinae) by Chhakchhuak, Liansangmawii, De Mandal, Surajit, Sanga, Zothan, Lalnunmawii, Esther, Lalhruaitluanga, H, Guruswami, Gurusubramanian, Sudalaimuthu, Naganeeswaran, Gopalakrishnan, Chellappa, Mugasimangalam, Raja C, Nachimuthu, Senthil Kumar

“…The complete mitogenome of Apis cerana cerana (Hymenoptera: Apidae: Apinae) was sequenced using Illumina NextSeq500 platform and found to be 15 831 bp long…”
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Natural antisense transcripts in Plasmodium falciparum isolates from patients with complicated malaria by Subudhi, Amit Kumar, Boopathi, P.A., Garg, Shilpi, Middha, Sheetal, Acharya, Jyoti, Pakalapati, Deepak, Saxena, Vishal, Aiyaz, Mohammed, Orekondy, Harsha B., Mugasimangalam, Raja C., Sirohi, Paramendra, Kochar, Sanjay K., Kochar, Dhanpat K., Das, Ashis

“…[Display omitted] •This is the first report on NATs in Plasmodium falciparum from patient isolates.•A total of 797 NATs have been detected of which 545 are…”
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Revealing natural antisense transcripts from Plasmodium vivax isolates: Evidence of genome regulation in complicated malaria by Boopathi, P.A., Subudhi, Amit Kumar, Garg, Shilpi, Middha, Sheetal, Acharya, Jyoti, Pakalapati, Deepak, Saxena, Vishal, Aiyaz, Mohammed, Chand, Bipin, Mugasimangalam, Raja C., Kochar, Sanjay K., Sirohi, Parmendra, Kochar, Dhanpat K., Das, Ashis

“…•This is the first report on NATs in Plasmodium vivax from patient isolates.•A total of 1348 NATs against the annotated transcriptional units were…”
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A Stable Hybrid Containing Haploid Genomes of Two Obligate Diploid Candida Species by Chakraborty, Uttara, Mohamed, Aiyaz, Kakade, Pallavi, Mugasimangalam, Raja C., Sadhale, Parag P., Sanyal, Kaustuv

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A tiling array-based comparative genomic hybridization approach to predict copy number variations between Plasmodium falciparum field isolates from the Indian Sub-continent [version 1; peer review: 1 approved, 1 approved with reservations] by Pandey, Isha, Kaur, Ramandeep, Subudhi, Amit Kumar, Boopathi, P.A, Mugasimangalam, Raja C., Rao, Sudha N., Aiyaz, Mohammed, Kochar, Sanjay, Kochar, Dhanpat, Das, Ashis

“…Background: There are several techniques to analyse copy number variation in both research and clinical settings, such as whole genome amplification (sWGA),…”
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Interdependence between DNA template secondary structure and priming efficiencies of short primers by Lvovsky, Lev, Ioshikhes, Ilya, Raja, Mugasimangalam C., Zevin-Sonkin, Dina, Sobolev, Irina A., Liberzon, Arthur, Shwartzburd, J., Ulanovsky, Levy E.

“…Here we analyze the effect of DNA folding on the performance of short primers and describe a simple technique for assessing hitherto uncertain values of…”
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DNA sequencing using differential extension with nucleotide subsets (DENS) by Raja, M.C, Zevin-Sonkin, D, Shwartzburd, J, Rozovskaya, T.A, Sobolev, I.A, Chertkov, O, Ramanathan, V, Lvovsky, L, Ulanovsky, L.E

“…Here we describe template directed enzymatic synthesis of unique primers, avoiding the chemical synthesis step in primer walking. We have termed this…”
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